RNA–Protein interactions for RNA: ENST00000440571.5

CNOT3-203, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 1,125 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-203ENST00000440571 DDX60LQ5H9U9 1706 aaKnown RBP26.79■■□□□ 1.88
CNOT3-203ENST00000440571 KANSL2Q9H9L4 492 aa26.78■■□□□ 1.88
CNOT3-203ENST00000440571 RAD50Q92878 1312 aa26.78■■□□□ 1.88
CNOT3-203ENST00000440571 ZMYM6O95789 1325 aa26.77■■□□□ 1.88
CNOT3-203ENST00000440571 USP14P54578 494 aa26.77■■□□□ 1.88
CNOT3-203ENST00000440571 NOM1Q5C9Z4 860 aaKnown RBP26.77■■□□□ 1.88
CNOT3-203ENST00000440571 IL25Q9H293 177 aa26.77■■□□□ 1.88
CNOT3-203ENST00000440571 CTNNA3Q9UI47 895 aa26.77■■□□□ 1.88
CNOT3-203ENST00000440571 SLC45A1Q9Y2W3 748 aa26.77■■□□□ 1.88
CNOT3-203ENST00000440571 ZNF213O14771 459 aa26.76■■□□□ 1.87
CNOT3-203ENST00000440571 PABPC4Q13310 644 aaKnown RBP eCLIP26.76■■□□□ 1.87
CNOT3-203ENST00000440571 DGKZQ13574 1117 aa26.76■■□□□ 1.87
CNOT3-203ENST00000440571 ZYXQ15942 572 aaKnown RBP26.76■■□□□ 1.87
CNOT3-203ENST00000440571 TREML2Q5T2D2 321 aa26.76■■□□□ 1.87
CNOT3-203ENST00000440571 KIAA1683Q9H0B3 1180 aa26.76■■□□□ 1.87
CNOT3-203ENST00000440571 ARHGEF10LQ9HCE6 1279 aa26.76■■□□□ 1.87
CNOT3-203ENST00000440571 INCENPQ9NQS7 918 aa26.76■■□□□ 1.87
CNOT3-203ENST00000440571 EMILIN3Q9NT22 766 aa26.76■■□□□ 1.87
CNOT3-203ENST00000440571 BAZ2AQ9UIF9 1905 aaKnown RBP26.76■■□□□ 1.87
CNOT3-203ENST00000440571 DOCK1Q14185 1865 aa26.76■■□□□ 1.87
CNOT3-203ENST00000440571 SGSM2O43147 1006 aa26.75■■□□□ 1.87
CNOT3-203ENST00000440571 TLR2O60603 784 aa26.75■■□□□ 1.87
CNOT3-203ENST00000440571 HAND2P61296 217 aa26.75■■□□□ 1.87
CNOT3-203ENST00000440571 ICA1Q05084 483 aa26.75■■□□□ 1.87
CNOT3-203ENST00000440571 ZNF296Q8WUU4 475 aaPredicted RBP26.75■■□□□ 1.87
CNOT3-203ENST00000440571 PARK7Q99497 189 aaKnown RBP26.75■■□□□ 1.87
CNOT3-203ENST00000440571 FKTNO75072 461 aa26.74■■□□□ 1.87
CNOT3-203ENST00000440571 OSBPP22059 807 aa26.74■■□□□ 1.87
CNOT3-203ENST00000440571 TFAP4Q01664 338 aa26.74■■□□□ 1.87
CNOT3-203ENST00000440571 ATP2B2Q01814 1243 aa26.74■■□□□ 1.87
CNOT3-203ENST00000440571 SIAH1Q8IUQ4 282 aa26.74■■□□□ 1.87
CNOT3-203ENST00000440571 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.74■■□□□ 1.87
CNOT3-203ENST00000440571 A0A1W2PRG0 241 aa26.73■■□□□ 1.87
CNOT3-203ENST00000440571 TSPY3P0CV98 308 aa26.73■■□□□ 1.87
CNOT3-203ENST00000440571 TSPY8P0CW00 308 aa26.73■■□□□ 1.87
CNOT3-203ENST00000440571 CYP2C8P10632 490 aa26.73■■□□□ 1.87
CNOT3-203ENST00000440571 FAM47AQ5JRC9 791 aa26.73■■□□□ 1.87
CNOT3-203ENST00000440571 COL13A1Q5TAT6 717 aaPredicted RBP26.73■■□□□ 1.87
CNOT3-203ENST00000440571 SH2D4AQ9H788 454 aa26.73■■□□□ 1.87
CNOT3-203ENST00000440571 TOMM22Q9NS69 142 aa26.73■■□□□ 1.87
CNOT3-203ENST00000440571 PNMA3Q9UL41 463 aa26.73■■□□□ 1.87
CNOT3-203ENST00000440571 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.73■■□□□ 1.87
CNOT3-203ENST00000440571 EEF2P13639 858 aaKnown RBP26.72■■□□□ 1.87
CNOT3-203ENST00000440571 CLEC10AQ8IUN9 316 aa26.72■■□□□ 1.87
CNOT3-203ENST00000440571 NEDD1Q8NHV4 660 aa26.72■■□□□ 1.87
CNOT3-203ENST00000440571 ORC4O43929 436 aa26.71■■□□□ 1.87
CNOT3-203ENST00000440571 RANBP6O60518 1105 aaKnown RBP26.71■■□□□ 1.87
CNOT3-203ENST00000440571 FGRP09769 529 aa26.71■■□□□ 1.87
CNOT3-203ENST00000440571 SP3Q02447 781 aa26.71■■□□□ 1.87
CNOT3-203ENST00000440571 IMMTQ16891 758 aaKnown RBP26.71■■□□□ 1.87
CNOT3-203ENST00000440571 CASC1Q6TDU7 716 aa26.71■■□□□ 1.87
CNOT3-203ENST00000440571 MFSD6Q6ZSS7 791 aa26.71■■□□□ 1.87
CNOT3-203ENST00000440571 KIAA1211Q6ZU35 1233 aa26.71■■□□□ 1.87
CNOT3-203ENST00000440571 C12orf42Q96LP6 360 aa26.71■■□□□ 1.87
CNOT3-203ENST00000440571 TMX2Q9Y320 296 aa26.71■■□□□ 1.87
CNOT3-203ENST00000440571 TACC3Q9Y6A5 838 aa26.71■■□□□ 1.87
CNOT3-203ENST00000440571 TSPY2A6NKD2 308 aa26.7■■□□□ 1.86
CNOT3-203ENST00000440571 PCP11498 1178 aaKnown RBP26.7■■□□□ 1.86
CNOT3-203ENST00000440571 HOXA7P31268 230 aaPredicted RBP26.7■■□□□ 1.86
CNOT3-203ENST00000440571 PTH1RQ03431 593 aa26.7■■□□□ 1.86
CNOT3-203ENST00000440571 RRP12Q5JTH9 1297 aaKnown RBP26.7■■□□□ 1.86
CNOT3-203ENST00000440571 AKNAD1Q5T1N1 836 aa26.7■■□□□ 1.86
CNOT3-203ENST00000440571 ESYT1Q9BSJ8 1104 aa26.7■■□□□ 1.86
CNOT3-203ENST00000440571 RNF41Q9H4P4 317 aaPredicted RBP26.7■■□□□ 1.86
CNOT3-203ENST00000440571 CPA4Q9UI42 421 aa26.7■■□□□ 1.86
CNOT3-203ENST00000440571 IRX3P78415 501 aaPredicted RBP26.69■■□□□ 1.86
CNOT3-203ENST00000440571 C17orf99Q6UX52 265 aa26.69■■□□□ 1.86
CNOT3-203ENST00000440571 SMCR8Q8TEV9 937 aaPredicted RBP26.69■■□□□ 1.86
CNOT3-203ENST00000440571 STAG1Q8WVM7 1258 aa26.69■■□□□ 1.86
CNOT3-203ENST00000440571 ASCC2Q9H1I8 757 aaPredicted RBP26.69■■□□□ 1.86
CNOT3-203ENST00000440571 NYAP2Q9P242 653 aa26.69■■□□□ 1.86
CNOT3-203ENST00000440571 CLIP2Q9UDT6 1046 aa26.69■■□□□ 1.86
CNOT3-203ENST00000440571 IGKV6D-41A0A0C4DH26 115 aa26.68■■□□□ 1.86
CNOT3-203ENST00000440571 USP17L15C9J2P7 530 aa26.68■■□□□ 1.86
CNOT3-203ENST00000440571 USP17L13C9JLJ4 530 aa26.68■■□□□ 1.86
CNOT3-203ENST00000440571 USP17L11C9JVI0 530 aa26.68■■□□□ 1.86
CNOT3-203ENST00000440571 USP17L18D6R9N7 530 aa26.68■■□□□ 1.86
CNOT3-203ENST00000440571 USP17L22D6RA61 530 aa26.68■■□□□ 1.86
CNOT3-203ENST00000440571 USP17L17D6RBQ6 530 aa26.68■■□□□ 1.86
CNOT3-203ENST00000440571 USP17L19D6RCP7 530 aa26.68■■□□□ 1.86
CNOT3-203ENST00000440571 USP17L20D6RJB6 530 aa26.68■■□□□ 1.86
CNOT3-203ENST00000440571 CDC45O75419 566 aa26.68■■□□□ 1.86
CNOT3-203ENST00000440571 USP17L24Q0WX57 530 aa26.68■■□□□ 1.86
CNOT3-203ENST00000440571 MTMR4Q9NYA4 1195 aa26.68■■□□□ 1.86
CNOT3-203ENST00000440571 U3KPZ7 1027 aaPredicted RBP26.68■■□□□ 1.86
CNOT3-203ENST00000440571 TBC1D10CQ8IV04 446 aa26.67■■□□□ 1.86
CNOT3-203ENST00000440571 CEP95Q96GE4 821 aa26.67■■□□□ 1.86
CNOT3-203ENST00000440571 ERO1AQ96HE7 468 aa26.67■■□□□ 1.86
CNOT3-203ENST00000440571 P2RX7Q99572 595 aaKnown RBP26.67■■□□□ 1.86
CNOT3-203ENST00000440571 NBPF3Q9H094 633 aa26.67■■□□□ 1.86
CNOT3-203ENST00000440571 VCPKMTQ9H867 229 aa26.67■■□□□ 1.86
CNOT3-203ENST00000440571 TTLL1O95922 423 aa26.66■■□□□ 1.86
CNOT3-203ENST00000440571 VCAM1P19320 739 aa26.66■■□□□ 1.86
CNOT3-203ENST00000440571 PPP4R3BQ5MIZ7 849 aa26.66■■□□□ 1.86
CNOT3-203ENST00000440571 LPAR1Q92633 364 aa26.66■■□□□ 1.86
CNOT3-203ENST00000440571 GOPCQ9HD26 462 aa26.66■■□□□ 1.86
CNOT3-203ENST00000440571 PHIPQ8WWQ0 1821 aa26.66■■□□□ 1.86
CNOT3-203ENST00000440571 RAD21O60216 631 aa26.65■■□□□ 1.86
CNOT3-203ENST00000440571 CATSPERGQ6ZRH7 1159 aa26.65■■□□□ 1.86
CNOT3-203ENST00000440571 MAP4K1Q92918 833 aa26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms