RNA–Protein interactions for RNA: ENST00000439106.5

PRAME-209, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 891 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-209ENST00000439106 A0A0G2JMZ2 1700 aa16.65■□□□□ 0.26
PRAME-209ENST00000439106 M0R2C6 588 aa16.65■□□□□ 0.26
PRAME-209ENST00000439106 AKR1B1P15121 316 aa16.65■□□□□ 0.26
PRAME-209ENST00000439106 MX1P20591 662 aa16.65■□□□□ 0.26
PRAME-209ENST00000439106 GRK4P32298 578 aa16.65■□□□□ 0.26
PRAME-209ENST00000439106 FLT3LGP49771 235 aa16.65■□□□□ 0.26
PRAME-209ENST00000439106 PRMT2P55345 433 aa16.65■□□□□ 0.26
PRAME-209ENST00000439106 USP17L2Q6R6M4 530 aa16.65■□□□□ 0.26
PRAME-209ENST00000439106 POTEEQ6S8J3 1075 aa16.65■□□□□ 0.26
PRAME-209ENST00000439106 STK11IPQ8N1F8 1099 aa16.65■□□□□ 0.26
PRAME-209ENST00000439106 EXOC6Q8TAG9 804 aa16.65■□□□□ 0.26
PRAME-209ENST00000439106 SEC62Q99442 399 aaKnown RBP16.65■□□□□ 0.26
PRAME-209ENST00000439106 TMEM106CQ9BVX2 250 aa16.65■□□□□ 0.26
PRAME-209ENST00000439106 TXNRD2Q9NNW7 524 aa16.65■□□□□ 0.26
PRAME-209ENST00000439106 RNF113AO15541 343 aaKnown RBP16.64■□□□□ 0.25
PRAME-209ENST00000439106 ELNP15502 786 aa16.64■□□□□ 0.25
PRAME-209ENST00000439106 HOXA7P31268 230 aaPredicted RBP16.64■□□□□ 0.25
PRAME-209ENST00000439106 GCLCP48506 637 aaPredicted RBP16.64■□□□□ 0.25
PRAME-209ENST00000439106 HERVK_113P62684 666 aa16.64■□□□□ 0.25
PRAME-209ENST00000439106 C12orf60Q5U649 245 aa16.64■□□□□ 0.25
PRAME-209ENST00000439106 CTR9Q6PD62 1173 aa16.64■□□□□ 0.25
PRAME-209ENST00000439106 APPBP2Q92624 585 aa16.64■□□□□ 0.25
PRAME-209ENST00000439106 STRBPQ96SI9 672 aaKnown RBP16.64■□□□□ 0.25
PRAME-209ENST00000439106 PAGR1Q9BTK6 254 aa16.64■□□□□ 0.25
PRAME-209ENST00000439106 ZNFX1Q9P2E3 1918 aaKnown RBP16.64■□□□□ 0.25
PRAME-209ENST00000439106 CEP290O15078 2479 aa16.63■□□□□ 0.25
PRAME-209ENST00000439106 A0A1W2PRG0 241 aa16.63■□□□□ 0.25
PRAME-209ENST00000439106 ERC2O15083 957 aa16.63■□□□□ 0.25
PRAME-209ENST00000439106 GPAA1O43292 621 aa16.63■□□□□ 0.25
PRAME-209ENST00000439106 VCAM1P19320 739 aa16.63■□□□□ 0.25
PRAME-209ENST00000439106 CDK8P49336 464 aa16.63■□□□□ 0.25
PRAME-209ENST00000439106 HDAC1Q13547 482 aaPredicted RBP16.63■□□□□ 0.25
PRAME-209ENST00000439106 FSD1Q9BTV5 496 aa16.63■□□□□ 0.25
PRAME-209ENST00000439106 EPB41L4AQ9HCS5 686 aaPredicted RBP16.63■□□□□ 0.25
PRAME-209ENST00000439106 BIN2Q9UBW5 565 aaPredicted RBP16.63■□□□□ 0.25
PRAME-209ENST00000439106 GSG1L2A8MUP6 293 aa16.62■□□□□ 0.25
PRAME-209ENST00000439106 ADCY3O60266 1144 aa16.62■□□□□ 0.25
PRAME-209ENST00000439106 GLRX3O76003 335 aaKnown RBP16.62■□□□□ 0.25
PRAME-209ENST00000439106 DDRGK1Q96HY6 314 aa16.62■□□□□ 0.25
PRAME-209ENST00000439106 C12orf42Q96LP6 360 aa16.62■□□□□ 0.25
PRAME-209ENST00000439106 KIAA1683Q9H0B3 1180 aa16.62■□□□□ 0.25
PRAME-209ENST00000439106 RBPJLQ9UBG7 517 aa16.62■□□□□ 0.25
PRAME-209ENST00000439106 MORF4L1Q9UBU8 362 aa16.62■□□□□ 0.25
PRAME-209ENST00000439106 SWAP70Q9UH65 585 aa16.62■□□□□ 0.25
PRAME-209ENST00000439106 FRMPD3Q5JV73 1810 aa16.61■□□□□ 0.25
PRAME-209ENST00000439106 USP14P54578 494 aa16.61■□□□□ 0.25
PRAME-209ENST00000439106 Q3C1V9 767 aa16.61■□□□□ 0.25
PRAME-209ENST00000439106 KIAA1755Q5JYT7 1200 aa16.61■□□□□ 0.25
PRAME-209ENST00000439106 B4GALNT3Q6L9W6 998 aa16.61■□□□□ 0.25
PRAME-209ENST00000439106 TMEM179Q6ZVK1 233 aa16.61■□□□□ 0.25
PRAME-209ENST00000439106 C16orf86Q6ZW13 317 aa16.61■□□□□ 0.25
PRAME-209ENST00000439106 AMOTL1Q8IY63 956 aa16.61■□□□□ 0.25
PRAME-209ENST00000439106 COA7Q96BR5 231 aa16.61■□□□□ 0.25
PRAME-209ENST00000439106 GCC1Q96CN9 775 aa16.61■□□□□ 0.25
PRAME-209ENST00000439106 RPAP3Q9H6T3 665 aaPredicted RBP16.61■□□□□ 0.25
PRAME-209ENST00000439106 ZBTB47Q9UFB7 747 aaPredicted RBP16.61■□□□□ 0.25
PRAME-209ENST00000439106 ALPK3Q96L96 1907 aa16.6■□□□□ 0.25
PRAME-209ENST00000439106 USP17L15C9J2P7 530 aa16.6■□□□□ 0.25
PRAME-209ENST00000439106 USP17L13C9JLJ4 530 aa16.6■□□□□ 0.25
PRAME-209ENST00000439106 USP17L11C9JVI0 530 aa16.6■□□□□ 0.25
PRAME-209ENST00000439106 USP17L18D6R9N7 530 aa16.6■□□□□ 0.25
PRAME-209ENST00000439106 USP17L22D6RA61 530 aa16.6■□□□□ 0.25
PRAME-209ENST00000439106 USP17L17D6RBQ6 530 aa16.6■□□□□ 0.25
PRAME-209ENST00000439106 USP17L19D6RCP7 530 aa16.6■□□□□ 0.25
PRAME-209ENST00000439106 USP17L20D6RJB6 530 aa16.6■□□□□ 0.25
PRAME-209ENST00000439106 CNMDO75829 334 aa16.6■□□□□ 0.25
PRAME-209ENST00000439106 CCL5P13501 91 aa16.6■□□□□ 0.25
PRAME-209ENST00000439106 USP17L24Q0WX57 530 aa16.6■□□□□ 0.25
PRAME-209ENST00000439106 CATSPERGQ6ZRH7 1159 aa16.6■□□□□ 0.25
PRAME-209ENST00000439106 SLAIN1Q8ND83 568 aa16.6■□□□□ 0.25
PRAME-209ENST00000439106 SHISA4Q96DD7 197 aa16.6■□□□□ 0.25
PRAME-209ENST00000439106 LNPKQ9C0E8 428 aa16.6■□□□□ 0.25
PRAME-209ENST00000439106 UNC93B1Q9H1C4 597 aa16.6■□□□□ 0.25
PRAME-209ENST00000439106 PORCNQ9H237 461 aa16.6■□□□□ 0.25
PRAME-209ENST00000439106 ARPP21Q9UBL0 812 aaPredicted RBP16.6■□□□□ 0.25
PRAME-209ENST00000439106 SUPT16HQ9Y5B9 1047 aaKnown RBP16.6■□□□□ 0.25
PRAME-209ENST00000439106 MINDY4BA8MYZ0 360 aa16.59■□□□□ 0.25
PRAME-209ENST00000439106 IGHDP01880 384 aa16.59■□□□□ 0.25
PRAME-209ENST00000439106 INHAP05111 366 aa16.59■□□□□ 0.25
PRAME-209ENST00000439106 ZFYP08048 801 aaPredicted RBP16.59■□□□□ 0.25
PRAME-209ENST00000439106 ERVK-9P63128 1117 aa16.59■□□□□ 0.25
PRAME-209ENST00000439106 ERVK-24P63145 666 aa16.59■□□□□ 0.25
PRAME-209ENST00000439106 IRX6P78412 446 aaPredicted RBP16.59■□□□□ 0.25
PRAME-209ENST00000439106 ICA1Q05084 483 aa16.59■□□□□ 0.25
PRAME-209ENST00000439106 CCDC129Q6ZRS4 1044 aa16.59■□□□□ 0.25
PRAME-209ENST00000439106 SIAH1Q8IUQ4 282 aa16.59■□□□□ 0.25
PRAME-209ENST00000439106 GPRC5AQ8NFJ5 357 aa16.59■□□□□ 0.25
PRAME-209ENST00000439106 SPDYE16A6NNV3 312 aaPredicted RBP16.58■□□□□ 0.24
PRAME-209ENST00000439106 APPP05067 770 aa16.58■□□□□ 0.24
PRAME-209ENST00000439106 TDO2P48775 406 aa16.58■□□□□ 0.24
PRAME-209ENST00000439106 PDE1AP54750 535 aa16.58■□□□□ 0.24
PRAME-209ENST00000439106 ATP2B2Q01814 1243 aa16.58■□□□□ 0.24
PRAME-209ENST00000439106 TRIM32Q13049 653 aa16.58■□□□□ 0.24
PRAME-209ENST00000439106 IRF5Q13568 498 aa16.58■□□□□ 0.24
PRAME-209ENST00000439106 SPICE1Q8N0Z3 855 aa16.58■□□□□ 0.24
PRAME-209ENST00000439106 RNF208Q9H0X6 261 aa16.58■□□□□ 0.24
PRAME-209ENST00000439106 GJD2Q9UKL4 321 aa16.58■□□□□ 0.24
PRAME-209ENST00000439106 ROBO3Q96MS0 1386 aa16.58■□□□□ 0.24
PRAME-209ENST00000439106 PLXNA1Q9UIW2 1896 aa16.58■□□□□ 0.24
PRAME-209ENST00000439106 CYP2B6P20813 491 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms