RNA–Protein interactions for RNA: ENST00000439029.5

SMPD4-208, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-208ENST00000439029 FAM47AQ5JRC9 791 aa12.12□□□□□ -0.47
SMPD4-208ENST00000439029 SLF2Q8IX21 1173 aa12.12□□□□□ -0.47
SMPD4-208ENST00000439029 ZGPATQ8N5A5 531 aaKnown RBP12.12□□□□□ -0.47
SMPD4-208ENST00000439029 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.12□□□□□ -0.479e-7■■■■□ 24.4
SMPD4-208ENST00000439029 TMEM39AQ9NV64 488 aa12.12□□□□□ -0.47
SMPD4-208ENST00000439029 IVNS1ABPQ9Y6Y0 642 aa12.12□□□□□ -0.47
SMPD4-208ENST00000439029 KIAA0355O15063 1070 aa12.11□□□□□ -0.47
SMPD4-208ENST00000439029 CCNA1P78396 465 aa12.11□□□□□ -0.47
SMPD4-208ENST00000439029 GRB14Q14449 540 aa12.11□□□□□ -0.47
SMPD4-208ENST00000439029 TMEM31Q5JXX7 168 aa12.11□□□□□ -0.47
SMPD4-208ENST00000439029 CCDC102BQ68D86 513 aa12.11□□□□□ -0.47
SMPD4-208ENST00000439029 DPP9Q86TI2 863 aa12.11□□□□□ -0.47
SMPD4-208ENST00000439029 FAM163AQ96GL9 167 aaPredicted RBP12.11□□□□□ -0.47
SMPD4-208ENST00000439029 BTBD7Q9P203 1132 aa12.11□□□□□ -0.47
SMPD4-208ENST00000439029 CEP126Q9P2H0 1117 aa12.11□□□□□ -0.47
SMPD4-208ENST00000439029 RABGAP1Q9Y3P9 1069 aa12.11□□□□□ -0.47
SMPD4-208ENST00000439029 SEMA3EO15041 775 aa12.1□□□□□ -0.47
SMPD4-208ENST00000439029 ASNSP08243 561 aa12.1□□□□□ -0.47
SMPD4-208ENST00000439029 HOXC6P09630 235 aa12.1□□□□□ -0.47
SMPD4-208ENST00000439029 SKIV2LQ15477 1246 aaKnown RBP12.1□□□□□ -0.47
SMPD4-208ENST00000439029 TBC1D9Q6ZT07 1266 aa12.1□□□□□ -0.47
SMPD4-208ENST00000439029 ERICH6Q7L0X2 663 aa12.1□□□□□ -0.47
SMPD4-208ENST00000439029 TEX11Q8IYF3 940 aa12.1□□□□□ -0.47
SMPD4-208ENST00000439029 SH3RF3Q8TEJ3 882 aaPredicted RBP12.1□□□□□ -0.47
SMPD4-208ENST00000439029 GTF3C2Q8WUA4 911 aaPredicted RBP12.1□□□□□ -0.47
SMPD4-208ENST00000439029 NKX2-4Q9H2Z4 354 aa12.1□□□□□ -0.47
SMPD4-208ENST00000439029 DNAJC18Q9H819 358 aa12.1□□□□□ -0.47
SMPD4-208ENST00000439029 ZBTB21Q9ULJ3 1066 aa12.1□□□□□ -0.47
SMPD4-208ENST00000439029 IL16Q14005 1332 aa12.1□□□□□ -0.47
SMPD4-208ENST00000439029 SEPT4O43236 478 aa12.09□□□□□ -0.47
SMPD4-208ENST00000439029 PGK1P00558 417 aa12.09□□□□□ -0.47
SMPD4-208ENST00000439029 ACRP10323 421 aa12.09□□□□□ -0.47
SMPD4-208ENST00000439029 CCDC27Q2M243 656 aa12.09□□□□□ -0.47
SMPD4-208ENST00000439029 SPTY2D1Q68D10 685 aaPredicted RBP12.09□□□□□ -0.47
SMPD4-208ENST00000439029 USP17L2Q6R6M4 530 aa12.09□□□□□ -0.47
SMPD4-208ENST00000439029 C16orf59Q7L2K0 433 aa12.09□□□□□ -0.47
SMPD4-208ENST00000439029 KHSRPQ92945 711 aaKnown RBP eCLIP12.09□□□□□ -0.47
SMPD4-208ENST00000439029 SNX27Q96L92 541 aa12.09□□□□□ -0.47
SMPD4-208ENST00000439029 FEZ1Q99689 392 aa12.09□□□□□ -0.47
SMPD4-208ENST00000439029 CXXC1Q9P0U4 656 aaPredicted RBP12.09□□□□□ -0.47
SMPD4-208ENST00000439029 HERC5Q9UII4 1024 aaKnown RBP12.09□□□□□ -0.47
SMPD4-208ENST00000439029 PHF24Q9UPV7 400 aa12.09□□□□□ -0.47
SMPD4-208ENST00000439029 SMCHD1A6NHR9 2005 aa12.09□□□□□ -0.47
SMPD4-208ENST00000439029 USP17L15C9J2P7 530 aa12.08□□□□□ -0.48
SMPD4-208ENST00000439029 USP17L13C9JLJ4 530 aa12.08□□□□□ -0.48
SMPD4-208ENST00000439029 USP17L11C9JVI0 530 aa12.08□□□□□ -0.48
SMPD4-208ENST00000439029 USP17L18D6R9N7 530 aa12.08□□□□□ -0.48
SMPD4-208ENST00000439029 USP17L22D6RA61 530 aa12.08□□□□□ -0.48
SMPD4-208ENST00000439029 USP17L17D6RBQ6 530 aa12.08□□□□□ -0.48
SMPD4-208ENST00000439029 USP17L19D6RCP7 530 aa12.08□□□□□ -0.48
SMPD4-208ENST00000439029 USP17L20D6RJB6 530 aa12.08□□□□□ -0.48
SMPD4-208ENST00000439029 COBLO75128 1261 aa12.08□□□□□ -0.48
SMPD4-208ENST00000439029 NPM3O75607 178 aaKnown RBP12.08□□□□□ -0.48
SMPD4-208ENST00000439029 IGHA2P01877 340 aa12.08□□□□□ -0.48
SMPD4-208ENST00000439029 ADORA2AP29274 412 aa12.08□□□□□ -0.48
SMPD4-208ENST00000439029 TIMM10P62072 90 aa12.08□□□□□ -0.48
SMPD4-208ENST00000439029 FAAP100Q0VG06 881 aa12.08□□□□□ -0.48
SMPD4-208ENST00000439029 USP17L24Q0WX57 530 aa12.08□□□□□ -0.48
SMPD4-208ENST00000439029 C1orf53Q5VUE5 145 aa12.08□□□□□ -0.48
SMPD4-208ENST00000439029 PI16Q6UXB8 463 aa12.08□□□□□ -0.48
SMPD4-208ENST00000439029 MAPKAPK5Q8IW41 473 aa12.08□□□□□ -0.48
SMPD4-208ENST00000439029 CRACR2BQ8N4Y2 399 aaPredicted RBP12.08□□□□□ -0.48
SMPD4-208ENST00000439029 SLC44A5Q8NCS7 719 aa12.08□□□□□ -0.48
SMPD4-208ENST00000439029 LENG1Q96BZ8 264 aaPredicted RBP12.08□□□□□ -0.48
SMPD4-208ENST00000439029 TRIM34Q9BYJ4 488 aa12.08□□□□□ -0.48
SMPD4-208ENST00000439029 TSPYL2Q9H2G4 693 aaPredicted RBP12.08□□□□□ -0.48
SMPD4-208ENST00000439029 C11orf16Q9NQ32 467 aa12.08□□□□□ -0.48
SMPD4-208ENST00000439029 PI4KBQ9UBF8 816 aa12.08□□□□□ -0.48
SMPD4-208ENST00000439029 ARIH1Q9Y4X5 557 aaPredicted RBP12.08□□□□□ -0.48
SMPD4-208ENST00000439029 SIPA1L1O43166 1804 aa12.07□□□□□ -0.48
SMPD4-208ENST00000439029 TMEM240Q5SV17 173 aa12.07□□□□□ -0.48
SMPD4-208ENST00000439029 OLFML2BQ68BL8 750 aa12.07□□□□□ -0.48
SMPD4-208ENST00000439029 USP44Q9H0E7 712 aa12.07□□□□□ -0.48
SMPD4-208ENST00000439029 XPNPEP3Q9NQH7 507 aa12.07□□□□□ -0.48
SMPD4-208ENST00000439029 RAI14Q9P0K7 980 aa12.07□□□□□ -0.48
SMPD4-208ENST00000439029 SAP30BPQ9UHR5 308 aaKnown RBP12.07□□□□□ -0.48
SMPD4-208ENST00000439029 MSRAQ9UJ68 235 aa12.07□□□□□ -0.48
SMPD4-208ENST00000439029 PALD1Q9ULE6 856 aa12.07□□□□□ -0.48
SMPD4-208ENST00000439029 PA2G4Q9UQ80 394 aaKnown RBP12.07□□□□□ -0.48
SMPD4-208ENST00000439029 YBX2Q9Y2T7 364 aaKnown RBP12.07□□□□□ -0.48
SMPD4-208ENST00000439029 A0A1W2PQ45 241 aaPredicted RBP12.06□□□□□ -0.48
SMPD4-208ENST00000439029 A0A1W2PQY0 241 aa12.06□□□□□ -0.48
SMPD4-208ENST00000439029 GH2P01242 217 aa12.06□□□□□ -0.48
SMPD4-208ENST00000439029 CSF2RAP15509 400 aa12.06□□□□□ -0.48
SMPD4-208ENST00000439029 CATSPERGQ6ZRH7 1159 aa12.06□□□□□ -0.48
SMPD4-208ENST00000439029 ZNF365Q70YC5 407 aa12.06□□□□□ -0.48
SMPD4-208ENST00000439029 TGFBRAP1Q8WUH2 860 aa12.06□□□□□ -0.48
SMPD4-208ENST00000439029 NSUN4Q96CB9 384 aaKnown RBP12.06□□□□□ -0.48
SMPD4-208ENST00000439029 PRKRIP1Q9H875 184 aaPredicted RBP12.06□□□□□ -0.48
SMPD4-208ENST00000439029 PRRC2BQ5JSZ5 2229 aaKnown RBP12.06□□□□□ -0.48
SMPD4-208ENST00000439029 SPDYE16A6NNV3 312 aaPredicted RBP12.05□□□□□ -0.48
SMPD4-208ENST00000439029 DCDC2CA8MYV0 355 aa12.05□□□□□ -0.48
SMPD4-208ENST00000439029 APBB1O00213 710 aa12.05□□□□□ -0.48
SMPD4-208ENST00000439029 TIMP1P01033 207 aa12.05□□□□□ -0.48
SMPD4-208ENST00000439029 LDHCP07864 332 aa12.05□□□□□ -0.48
SMPD4-208ENST00000439029 VCAM1P19320 739 aa12.05□□□□□ -0.48
SMPD4-208ENST00000439029 MRE11P49959 708 aa12.05□□□□□ -0.48
SMPD4-208ENST00000439029 RABGGTBP53611 331 aa12.05□□□□□ -0.48
SMPD4-208ENST00000439029 CCDC184Q52MB2 194 aa12.05□□□□□ -0.48
SMPD4-208ENST00000439029 ACER1Q8TDN7 264 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms