RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 SMG5Q9UPR3 1016 aaKnown RBP4.94□□□□□ -1.62
HMGB1P12-201ENST00000438594 PRAMEF27A3QJZ7 478 aa4.93□□□□□ -1.62
HMGB1P12-201ENST00000438594 MAP4K4O95819 1239 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P12-201ENST00000438594 XRCC5P13010 732 aaKnown RBP4.93□□□□□ -1.62
HMGB1P12-201ENST00000438594 HK2P52789 917 aa4.93□□□□□ -1.62
HMGB1P12-201ENST00000438594 ARHGAP4P98171 946 aa4.93□□□□□ -1.62
HMGB1P12-201ENST00000438594 ZBTB37Q5TC79 503 aa4.93□□□□□ -1.62
HMGB1P12-201ENST00000438594 AMIGO3Q86WK7 504 aa4.93□□□□□ -1.62
HMGB1P12-201ENST00000438594 KCT2Q8NC54 265 aa4.93□□□□□ -1.62
HMGB1P12-201ENST00000438594 GRIN3AQ8TCU5 1115 aa4.93□□□□□ -1.62
HMGB1P12-201ENST00000438594 MORC4Q8TE76 937 aa4.93□□□□□ -1.62
HMGB1P12-201ENST00000438594 SGSM3Q96HU1 749 aa4.93□□□□□ -1.62
HMGB1P12-201ENST00000438594 NAP1L5Q96NT1 182 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P12-201ENST00000438594 LNPKQ9C0E8 428 aa4.93□□□□□ -1.62
HMGB1P12-201ENST00000438594 METTL14Q9HCE5 456 aaKnown RBP4.93□□□□□ -1.62
HMGB1P12-201ENST00000438594 SEMA3GQ9NS98 782 aa4.93□□□□□ -1.62
HMGB1P12-201ENST00000438594 ZSWIM5Q9P217 1185 aa4.93□□□□□ -1.62
HMGB1P12-201ENST00000438594 RAPGEFL1Q9UHV5 662 aa4.93□□□□□ -1.62
HMGB1P12-201ENST00000438594 PCDHA4Q9UN74 947 aa4.93□□□□□ -1.62
HMGB1P12-201ENST00000438594 TMA7Q9Y2S6 64 aaKnown RBP4.93□□□□□ -1.62
HMGB1P12-201ENST00000438594 FANCGO15287 622 aa4.92□□□□□ -1.62
HMGB1P12-201ENST00000438594 PEX14O75381 377 aa4.92□□□□□ -1.62
HMGB1P12-201ENST00000438594 PARNO95453 639 aaKnown RBP4.92□□□□□ -1.62
HMGB1P12-201ENST00000438594 HOXA5P20719 270 aa4.92□□□□□ -1.62
HMGB1P12-201ENST00000438594 NTF4P34130 210 aa4.92□□□□□ -1.62
HMGB1P12-201ENST00000438594 EGFLAMQ63HQ2 1017 aa4.92□□□□□ -1.62
HMGB1P12-201ENST00000438594 TPTE2Q6XPS3 522 aa4.92□□□□□ -1.62
HMGB1P12-201ENST00000438594 APBB1IPQ7Z5R6 666 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P12-201ENST00000438594 ZNF507Q8TCN5 953 aa4.92□□□□□ -1.62
HMGB1P12-201ENST00000438594 UBE2FQ969M7 185 aa4.92□□□□□ -1.62
HMGB1P12-201ENST00000438594 CITED4Q96RK1 184 aa4.92□□□□□ -1.62
HMGB1P12-201ENST00000438594 CD320Q9NPF0 282 aa4.92□□□□□ -1.62
HMGB1P12-201ENST00000438594 SAMM50Q9Y512 469 aa4.92□□□□□ -1.62
HMGB1P12-201ENST00000438594 TLDC2A0PJX2 215 aa4.91□□□□□ -1.62
HMGB1P12-201ENST00000438594 LRIG2O94898 1065 aa4.91□□□□□ -1.62
HMGB1P12-201ENST00000438594 SLITRK5O94991 958 aa4.91□□□□□ -1.62
HMGB1P12-201ENST00000438594 ZEB1P37275 1124 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P12-201ENST00000438594 LINC00310P59036 64 aa4.91□□□□□ -1.62
HMGB1P12-201ENST00000438594 ERVFC1P60507 584 aa4.91□□□□□ -1.62
HMGB1P12-201ENST00000438594 ZNF252P-AS1Q0IIN9 211 aa4.91□□□□□ -1.62
HMGB1P12-201ENST00000438594 FAM50AQ14320 339 aaKnown RBP4.91□□□□□ -1.62
HMGB1P12-201ENST00000438594 NXPE4Q6UWF7 544 aa4.91□□□□□ -1.62
HMGB1P12-201ENST00000438594 MYLIPQ8WY64 445 aa4.91□□□□□ -1.62
HMGB1P12-201ENST00000438594 RELTQ969Z4 430 aa4.91□□□□□ -1.62
HMGB1P12-201ENST00000438594 SLC26A8Q96RN1 970 aa4.91□□□□□ -1.62
HMGB1P12-201ENST00000438594 DNAJC2Q99543 621 aaKnown RBP4.91□□□□□ -1.62
HMGB1P12-201ENST00000438594 ZCCHC4Q9H5U6 513 aa4.91□□□□□ -1.62
HMGB1P12-201ENST00000438594 LAS1LQ9Y4W2 734 aaKnown RBP4.91□□□□□ -1.62
HMGB1P12-201ENST00000438594 ANKRD33BA6NCL7 494 aa4.9□□□□□ -1.63
HMGB1P12-201ENST00000438594 SOWAHDA6NJG2 315 aa4.9□□□□□ -1.63
HMGB1P12-201ENST00000438594 FBXO24O75426 580 aa4.9□□□□□ -1.63
HMGB1P12-201ENST00000438594 BMP7P18075 431 aa4.9□□□□□ -1.63
HMGB1P12-201ENST00000438594 ERCC5P28715 1186 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P12-201ENST00000438594 IGBP1P78318 339 aa4.9□□□□□ -1.63
HMGB1P12-201ENST00000438594 TAGLNQ01995 201 aaKnown RBP4.9□□□□□ -1.63
HMGB1P12-201ENST00000438594 RALBP1Q15311 655 aa4.9□□□□□ -1.63
HMGB1P12-201ENST00000438594 PTPROQ16827 1216 aa4.9□□□□□ -1.63
HMGB1P12-201ENST00000438594 RALGPS1Q5JS13 557 aa4.9□□□□□ -1.63
HMGB1P12-201ENST00000438594 SDE2Q6IQ49 451 aa4.9□□□□□ -1.63
HMGB1P12-201ENST00000438594 LLGL2Q6P1M3 1020 aa4.9□□□□□ -1.63
HMGB1P12-201ENST00000438594 TMTC2Q8N394 836 aa4.9□□□□□ -1.63
HMGB1P12-201ENST00000438594 XAGE3Q8WTP9 111 aa4.9□□□□□ -1.63
HMGB1P12-201ENST00000438594 EVI5LQ96CN4 794 aa4.9□□□□□ -1.63
HMGB1P12-201ENST00000438594 DMRTB1Q96MA1 342 aa4.9□□□□□ -1.63
HMGB1P12-201ENST00000438594 KRTAP9-3Q9BYQ3 159 aa4.9□□□□□ -1.63
HMGB1P12-201ENST00000438594 TERF2IPQ9NYB0 399 aa4.9□□□□□ -1.63
HMGB1P12-201ENST00000438594 MAGEC2Q9UBF1 373 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P12-201ENST00000438594 TBX22Q9Y458 520 aa4.9□□□□□ -1.63
HMGB1P12-201ENST00000438594 CAPN6Q9Y6Q1 641 aa4.9□□□□□ -1.63
HMGB1P12-201ENST00000438594 CNTNAP4Q9C0A0 1308 aa4.9□□□□□ -1.63
HMGB1P12-201ENST00000438594 DNAJC25-GNG10A0A024R161 153 aa4.89□□□□□ -1.63
HMGB1P12-201ENST00000438594 hCG_2014768A0A024R1R8 64 aa4.89□□□□□ -1.63
HMGB1P12-201ENST00000438594 TRIM37O94972 964 aa4.89□□□□□ -1.63
HMGB1P12-201ENST00000438594 PTMSP20962 102 aa4.89□□□□□ -1.63
HMGB1P12-201ENST00000438594 GLDCP23378 1020 aa4.89□□□□□ -1.63
HMGB1P12-201ENST00000438594 FBXO33Q7Z6M2 555 aa4.89□□□□□ -1.63
HMGB1P12-201ENST00000438594 SMC5Q8IY18 1101 aa4.89□□□□□ -1.63
HMGB1P12-201ENST00000438594 NME8Q8N427 588 aa4.89□□□□□ -1.63
HMGB1P12-201ENST00000438594 GPATCH11Q8N954 259 aa4.89□□□□□ -1.63
HMGB1P12-201ENST00000438594 NECAB3Q96P71 396 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P12-201ENST00000438594 ST14Q9Y5Y6 855 aa4.89□□□□□ -1.63
HMGB1P12-201ENST00000438594 CCDC194A0A1B0GVG4 234 aa4.88□□□□□ -1.63
HMGB1P12-201ENST00000438594 PAGE1O75459 146 aa4.88□□□□□ -1.63
HMGB1P12-201ENST00000438594 MED14OSP0DP75 135 aa4.88□□□□□ -1.63
HMGB1P12-201ENST00000438594 BMP6P22004 513 aa4.88□□□□□ -1.63
HMGB1P12-201ENST00000438594 TRHRP34981 398 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P12-201ENST00000438594 ETF1P62495 437 aaKnown RBP4.88□□□□□ -1.63
HMGB1P12-201ENST00000438594 LRRC14Q15048 493 aa4.88□□□□□ -1.63
HMGB1P12-201ENST00000438594 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.88□□□□□ -1.63
HMGB1P12-201ENST00000438594 TMEM132EQ6IEE7 984 aa4.88□□□□□ -1.63
HMGB1P12-201ENST00000438594 LETMD1Q6P1Q0 360 aa4.88□□□□□ -1.63
HMGB1P12-201ENST00000438594 THAP5Q7Z6K1 395 aa4.88□□□□□ -1.63
HMGB1P12-201ENST00000438594 CREG2Q8IUH2 290 aa4.88□□□□□ -1.63
HMGB1P12-201ENST00000438594 NLGN1Q8N2Q7 840 aa4.88□□□□□ -1.63
HMGB1P12-201ENST00000438594 RIN3Q8TB24 985 aa4.88□□□□□ -1.63
HMGB1P12-201ENST00000438594 C20orf173Q96LM9 149 aa4.88□□□□□ -1.63
HMGB1P12-201ENST00000438594 UBA5Q9GZZ9 404 aa4.88□□□□□ -1.63
HMGB1P12-201ENST00000438594 FBRSQ9HAH7 460 aa4.88□□□□□ -1.63
HMGB1P12-201ENST00000438594 PARD6AQ9NPB6 346 aa4.88□□□□□ -1.63
HMGB1P12-201ENST00000438594 TMEM59LQ9UK28 342 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms