RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 RUFY3Q7L099 469 aa21.66■■□□□ 1.06
HDAC6-208ENST00000438518 DGKHQ86XP1 1220 aa21.66■■□□□ 1.06
HDAC6-208ENST00000438518 SLC10A4Q96EP9 437 aa21.66■■□□□ 1.06
HDAC6-208ENST00000438518 ZSCAN10Q96SZ4 725 aaPredicted RBP21.66■■□□□ 1.06
HDAC6-208ENST00000438518 WDR18Q9BV38 432 aa21.66■■□□□ 1.06
HDAC6-208ENST00000438518 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.66■■□□□ 1.06
HDAC6-208ENST00000438518 ARHGEF10LQ9HCE6 1279 aa21.66■■□□□ 1.06
HDAC6-208ENST00000438518 MTMR4Q9NYA4 1195 aa21.66■■□□□ 1.06
HDAC6-208ENST00000438518 NYAP2Q9P242 653 aa21.66■■□□□ 1.06
HDAC6-208ENST00000438518 CYP46A1Q9Y6A2 500 aa21.66■■□□□ 1.06
HDAC6-208ENST00000438518 TTLL1O95922 423 aa21.65■■□□□ 1.06
HDAC6-208ENST00000438518 CASTP20810 708 aaKnown RBP21.65■■□□□ 1.06
HDAC6-208ENST00000438518 GUCY1A2P33402 732 aa21.65■■□□□ 1.06
HDAC6-208ENST00000438518 SEPT2Q15019 361 aa21.65■■□□□ 1.06
HDAC6-208ENST00000438518 FBXL16Q8N461 479 aa21.65■■□□□ 1.06
HDAC6-208ENST00000438518 CEP95Q96GE4 821 aa21.65■■□□□ 1.06
HDAC6-208ENST00000438518 TNKSO95271 1327 aa21.64■■□□□ 1.05
HDAC6-208ENST00000438518 PRC1O43663 620 aa21.64■■□□□ 1.05
HDAC6-208ENST00000438518 ZBTB48P10074 688 aaPredicted RBP21.64■■□□□ 1.05
HDAC6-208ENST00000438518 RPS6KB1P23443 525 aa21.64■■□□□ 1.05
HDAC6-208ENST00000438518 PPIL2Q13356 520 aa21.64■■□□□ 1.05
HDAC6-208ENST00000438518 CYB5R4Q7L1T6 521 aa21.64■■□□□ 1.05
HDAC6-208ENST00000438518 TMTC2Q8N394 836 aa21.64■■□□□ 1.05
HDAC6-208ENST00000438518 ANKS1AQ92625 1134 aa21.64■■□□□ 1.05
HDAC6-208ENST00000438518 ELP3Q9H9T3 547 aa21.64■■□□□ 1.05
HDAC6-208ENST00000438518 IL17RBQ9NRM6 502 aa21.64■■□□□ 1.05
HDAC6-208ENST00000438518 ABT1Q9ULW3 272 aaKnown RBP21.64■■□□□ 1.05
HDAC6-208ENST00000438518 JAG1P78504 1218 aa21.63■■□□□ 1.05
HDAC6-208ENST00000438518 EXOSC10Q01780 885 aaKnown RBP21.63■■□□□ 1.05
HDAC6-208ENST00000438518 RGMBQ6NW40 437 aa21.63■■□□□ 1.05
HDAC6-208ENST00000438518 ZNF280CQ8ND82 737 aa21.63■■□□□ 1.05
HDAC6-208ENST00000438518 MKL1Q969V6 931 aa21.63■■□□□ 1.05
HDAC6-208ENST00000438518 CLMNQ96JQ2 1002 aa21.63■■□□□ 1.05
HDAC6-208ENST00000438518 IFIT3O14879 490 aaKnown RBP21.62■■□□□ 1.05
HDAC6-208ENST00000438518 LIFRP42702 1097 aa21.62■■□□□ 1.05
HDAC6-208ENST00000438518 ANTXR2P58335 489 aa21.62■■□□□ 1.05
HDAC6-208ENST00000438518 RABEP1Q15276 862 aa21.62■■□□□ 1.05
HDAC6-208ENST00000438518 CCDC102AQ96A19 550 aa21.62■■□□□ 1.05
HDAC6-208ENST00000438518 OPTNQ96CV9 577 aa21.62■■□□□ 1.05
HDAC6-208ENST00000438518 STX8Q9UNK0 236 aa21.62■■□□□ 1.05
HDAC6-208ENST00000438518 ZHX2Q9Y6X8 837 aa21.62■■□□□ 1.05
HDAC6-208ENST00000438518 PTPRFP10586 1907 aa21.62■■□□□ 1.05
HDAC6-208ENST00000438518 RASSF10A6NK89 507 aa21.61■■□□□ 1.05
HDAC6-208ENST00000438518 C19orf81C9J6K1 198 aa21.61■■□□□ 1.05
HDAC6-208ENST00000438518 CXCL11O14625 94 aa21.61■■□□□ 1.05
HDAC6-208ENST00000438518 TOP1P11387 765 aaKnown RBP21.61■■□□□ 1.05
HDAC6-208ENST00000438518 EEF2P13639 858 aaKnown RBP21.61■■□□□ 1.05
HDAC6-208ENST00000438518 USP14P54578 494 aa21.61■■□□□ 1.05
HDAC6-208ENST00000438518 WTAPQ15007 396 aa21.61■■□□□ 1.05
HDAC6-208ENST00000438518 IFIT1BQ5T764 474 aaKnown RBP21.61■■□□□ 1.05
HDAC6-208ENST00000438518 WNK4Q96J92 1243 aa21.61■■□□□ 1.05
HDAC6-208ENST00000438518 AGXT2Q9BYV1 514 aa21.61■■□□□ 1.05
HDAC6-208ENST00000438518 ALDH8A1Q9H2A2 487 aaPredicted RBP21.61■■□□□ 1.05
HDAC6-208ENST00000438518 TMX2Q9Y320 296 aa21.61■■□□□ 1.05
HDAC6-208ENST00000438518 AFG3L2Q9Y4W6 797 aa21.61■■□□□ 1.05
HDAC6-208ENST00000438518 USP17L10C9JJH3 530 aa21.6■■□□□ 1.05
HDAC6-208ENST00000438518 ZNF157P51786 506 aaPredicted RBP21.6■■□□□ 1.05
HDAC6-208ENST00000438518 C1QTNF8P60827 252 aa21.6■■□□□ 1.05
HDAC6-208ENST00000438518 SEC23AQ15436 765 aa21.6■■□□□ 1.05
HDAC6-208ENST00000438518 SHROOM1Q2M3G4 852 aaPredicted RBP21.6■■□□□ 1.05
HDAC6-208ENST00000438518 TMEM67Q5HYA8 995 aa21.6■■□□□ 1.05
HDAC6-208ENST00000438518 RCSD1Q6JBY9 416 aa21.6■■□□□ 1.05
HDAC6-208ENST00000438518 ENAHQ8N8S7 591 aaPredicted RBP21.6■■□□□ 1.05
HDAC6-208ENST00000438518 NKX2-3Q8TAU0 364 aa21.6■■□□□ 1.05
HDAC6-208ENST00000438518 IGDCC4Q8TDY8 1250 aa21.6■■□□□ 1.05
HDAC6-208ENST00000438518 OTUD5Q96G74 571 aa21.6■■□□□ 1.05
HDAC6-208ENST00000438518 KIF2CQ99661 725 aa21.6■■□□□ 1.05
HDAC6-208ENST00000438518 ZKSCAN3Q9BRR0 538 aa21.6■■□□□ 1.05
HDAC6-208ENST00000438518 KIAA1683Q9H0B3 1180 aa21.6■■□□□ 1.05
HDAC6-208ENST00000438518 KCNH4Q9UQ05 1017 aa21.6■■□□□ 1.05
HDAC6-208ENST00000438518 LOC285556D6RIA3 1793 aa21.6■■□□□ 1.05
HDAC6-208ENST00000438518 SH2B2O14492 632 aaPredicted RBP21.59■■□□□ 1.05
HDAC6-208ENST00000438518 SLC10A3P09131 477 aa21.59■■□□□ 1.05
HDAC6-208ENST00000438518 FGD1P98174 961 aa21.59■■□□□ 1.05
HDAC6-208ENST00000438518 ANKRD1Q15327 319 aa21.59■■□□□ 1.05
HDAC6-208ENST00000438518 CHST3Q7LGC8 479 aa21.59■■□□□ 1.05
HDAC6-208ENST00000438518 SGMS1Q86VZ5 419 aa21.59■■□□□ 1.05
HDAC6-208ENST00000438518 LPAR1Q92633 364 aa21.59■■□□□ 1.05
HDAC6-208ENST00000438518 FEZ1Q99689 392 aa21.59■■□□□ 1.05
HDAC6-208ENST00000438518 UPF3BQ9BZI7 483 aaKnown RBP21.59■■□□□ 1.05
HDAC6-208ENST00000438518 GOPCQ9HD26 462 aa21.59■■□□□ 1.05
HDAC6-208ENST00000438518 CLIP2Q9UDT6 1046 aa21.59■■□□□ 1.05
HDAC6-208ENST00000438518 NMT2O60551 498 aa21.58■■□□□ 1.05
HDAC6-208ENST00000438518 BACE1P56817 501 aa21.58■■□□□ 1.05
HDAC6-208ENST00000438518 SH3D19Q5HYK7 790 aa21.58■■□□□ 1.05
HDAC6-208ENST00000438518 SPRYD7Q5W111 196 aa21.58■■□□□ 1.05
HDAC6-208ENST00000438518 RASAL3Q86YV0 1011 aa21.58■■□□□ 1.05
HDAC6-208ENST00000438518 SIAH1Q8IUQ4 282 aa21.58■■□□□ 1.05
HDAC6-208ENST00000438518 GMCL1P1Q8NEA9 526 aa21.58■■□□□ 1.05
HDAC6-208ENST00000438518 KAT14Q9H8E8 782 aa21.58■■□□□ 1.05
HDAC6-208ENST00000438518 PDRG1Q9NUG6 133 aa21.58■■□□□ 1.05
HDAC6-208ENST00000438518 IRF6O14896 467 aa21.57■■□□□ 1.04
HDAC6-208ENST00000438518 ECE1P42892 770 aa21.57■■□□□ 1.04
HDAC6-208ENST00000438518 GTF2A2P52657 109 aa21.57■■□□□ 1.04
HDAC6-208ENST00000438518 ATP2B2Q01814 1243 aa21.57■■□□□ 1.04
HDAC6-208ENST00000438518 SPP2Q13103 211 aa21.57■■□□□ 1.04
HDAC6-208ENST00000438518 SNAPC2Q13487 334 aa21.57■■□□□ 1.04
HDAC6-208ENST00000438518 DEFB115Q30KQ5 88 aa21.57■■□□□ 1.04
HDAC6-208ENST00000438518 USP17L2Q6R6M4 530 aa21.57■■□□□ 1.04
HDAC6-208ENST00000438518 Q6ZUG5 572 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms