RNA–Protein interactions for RNA: ENST00000437995.1

SURF1-202, Transcript of SURF1, cytochrome c oxidase assembly factor, humanhuman

TSL 5

Gene SURF1, Length 813 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF1-202ENST00000437995 MINDY4BA8MYZ0 360 aa23.33■■□□□ 1.33
SURF1-202ENST00000437995 AKR1B1P15121 316 aa23.33■■□□□ 1.33
SURF1-202ENST00000437995 CCDC129Q6ZRS4 1044 aa23.33■■□□□ 1.33
SURF1-202ENST00000437995 ACER1Q8TDN7 264 aa23.33■■□□□ 1.33
SURF1-202ENST00000437995 RILPL2Q969X0 211 aa23.33■■□□□ 1.33
SURF1-202ENST00000437995 C12orf42Q96LP6 360 aa23.33■■□□□ 1.33
SURF1-202ENST00000437995 ARHGAP39Q9C0H5 1083 aa23.33■■□□□ 1.33
SURF1-202ENST00000437995 KIAA1683Q9H0B3 1180 aa23.33■■□□□ 1.33
SURF1-202ENST00000437995 ASCC2Q9H1I8 757 aaPredicted RBP23.33■■□□□ 1.33
SURF1-202ENST00000437995 HELLSQ9NRZ9 838 aa23.33■■□□□ 1.33
SURF1-202ENST00000437995 EMILIN3Q9NT22 766 aa23.33■■□□□ 1.33
SURF1-202ENST00000437995 PTPN22Q9Y2R2 807 aa23.33■■□□□ 1.33
SURF1-202ENST00000437995 ZSWIM8A7E2V4 1837 aa23.32■■□□□ 1.32
SURF1-202ENST00000437995 HOXA7P31268 230 aaPredicted RBP23.32■■□□□ 1.32
SURF1-202ENST00000437995 USP14P54578 494 aa23.32■■□□□ 1.32
SURF1-202ENST00000437995 ZYXQ15942 572 aaKnown RBP23.32■■□□□ 1.32
SURF1-202ENST00000437995 GNRH1P01148 92 aa23.31■■□□□ 1.32
SURF1-202ENST00000437995 IRX3P78415 501 aaPredicted RBP23.31■■□□□ 1.32
SURF1-202ENST00000437995 NAPBQ9H115 298 aa23.31■■□□□ 1.32
SURF1-202ENST00000437995 A0A0D9SFI3 127 aa23.3■■□□□ 1.32
SURF1-202ENST00000437995 PDE4AP27815 886 aa23.3■■□□□ 1.32
SURF1-202ENST00000437995 PSMC4P43686 418 aa23.3■■□□□ 1.32
SURF1-202ENST00000437995 GCLCP48506 637 aaPredicted RBP23.3■■□□□ 1.32
SURF1-202ENST00000437995 FAM227BQ96M60 508 aa23.3■■□□□ 1.32
SURF1-202ENST00000437995 CTGFP29279 349 aa23.29■■□□□ 1.32
SURF1-202ENST00000437995 NMIQ13287 307 aaPredicted RBP23.29■■□□□ 1.32
SURF1-202ENST00000437995 MCMDC2Q4G0Z9 681 aa23.29■■□□□ 1.32
SURF1-202ENST00000437995 ANKRD13CQ8N6S4 541 aa23.29■■□□□ 1.32
SURF1-202ENST00000437995 TRIM47Q96LD4 638 aa23.29■■□□□ 1.32
SURF1-202ENST00000437995 A0A1W2PRG0 241 aa23.28■■□□□ 1.32
SURF1-202ENST00000437995 FOXP2O15409 715 aa23.28■■□□□ 1.32
SURF1-202ENST00000437995 ECM2O94769 699 aaPredicted RBP23.28■■□□□ 1.32
SURF1-202ENST00000437995 FMNL1O95466 1100 aaPredicted RBP23.28■■□□□ 1.32
SURF1-202ENST00000437995 ICA1Q05084 483 aa23.28■■□□□ 1.32
SURF1-202ENST00000437995 FAM110CQ1W6H9 321 aa23.28■■□□□ 1.32
SURF1-202ENST00000437995 STK11IPQ8N1F8 1099 aa23.28■■□□□ 1.32
SURF1-202ENST00000437995 MKNK2Q9HBH9 465 aa23.28■■□□□ 1.32
SURF1-202ENST00000437995 SDSP20132 328 aa23.27■■□□□ 1.32
SURF1-202ENST00000437995 RASA1P20936 1047 aa23.27■■□□□ 1.32
SURF1-202ENST00000437995 PRMT2P55345 433 aa23.27■■□□□ 1.32
SURF1-202ENST00000437995 FCGRTP55899 365 aa23.27■■□□□ 1.32
SURF1-202ENST00000437995 CLEC10AQ8IUN9 316 aa23.27■■□□□ 1.32
SURF1-202ENST00000437995 ZNF287Q9HBT7 754 aa23.27■■□□□ 1.32
SURF1-202ENST00000437995 ARHGEF10LQ9HCE6 1279 aa23.27■■□□□ 1.32
SURF1-202ENST00000437995 USP17L15C9J2P7 530 aa23.26■■□□□ 1.31
SURF1-202ENST00000437995 USP17L13C9JLJ4 530 aa23.26■■□□□ 1.31
SURF1-202ENST00000437995 USP17L11C9JVI0 530 aa23.26■■□□□ 1.31
SURF1-202ENST00000437995 USP17L18D6R9N7 530 aa23.26■■□□□ 1.31
SURF1-202ENST00000437995 USP17L22D6RA61 530 aa23.26■■□□□ 1.31
SURF1-202ENST00000437995 USP17L17D6RBQ6 530 aa23.26■■□□□ 1.31
SURF1-202ENST00000437995 USP17L19D6RCP7 530 aa23.26■■□□□ 1.31
SURF1-202ENST00000437995 USP17L20D6RJB6 530 aa23.26■■□□□ 1.31
SURF1-202ENST00000437995 VCAM1P19320 739 aa23.26■■□□□ 1.31
SURF1-202ENST00000437995 HOXD10P28358 340 aa23.26■■□□□ 1.31
SURF1-202ENST00000437995 HERVK_113P62684 666 aa23.26■■□□□ 1.31
SURF1-202ENST00000437995 PPARAQ07869 468 aa23.26■■□□□ 1.31
SURF1-202ENST00000437995 USP17L24Q0WX57 530 aa23.26■■□□□ 1.31
SURF1-202ENST00000437995 VPS53Q5VIR6 699 aa23.26■■□□□ 1.31
SURF1-202ENST00000437995 P2RX7Q99572 595 aaKnown RBP23.26■■□□□ 1.31
SURF1-202ENST00000437995 KANSL2Q9H9L4 492 aa23.26■■□□□ 1.31
SURF1-202ENST00000437995 PTCH2Q9Y6C5 1203 aa23.26■■□□□ 1.31
SURF1-202ENST00000437995 MGAMO43451 1857 aa23.26■■□□□ 1.31
SURF1-202ENST00000437995 SLC3A2P08195 630 aaKnown RBP23.25■■□□□ 1.31
SURF1-202ENST00000437995 SIAH1Q8IUQ4 282 aa23.25■■□□□ 1.31
SURF1-202ENST00000437995 SH2D4AQ9H788 454 aa23.25■■□□□ 1.31
SURF1-202ENST00000437995 SRRDQ9UH36 339 aa23.25■■□□□ 1.31
SURF1-202ENST00000437995 GREB1LQ9C091 1923 aaPredicted RBP23.25■■□□□ 1.31
SURF1-202ENST00000437995 HIP1O00291 1037 aa23.24■■□□□ 1.31
SURF1-202ENST00000437995 PDE4BQ07343 736 aa23.24■■□□□ 1.31
SURF1-202ENST00000437995 ALX1Q15699 326 aa23.24■■□□□ 1.31
SURF1-202ENST00000437995 TTC22Q5TAA0 569 aa23.24■■□□□ 1.31
SURF1-202ENST00000437995 ZNF589Q86UQ0 364 aaPredicted RBP23.24■■□□□ 1.31
SURF1-202ENST00000437995 GTF3C2Q8WUA4 911 aaPredicted RBP23.24■■□□□ 1.31
SURF1-202ENST00000437995 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.24■■□□□ 1.31
SURF1-202ENST00000437995 RPAP3Q9H6T3 665 aaPredicted RBP23.24■■□□□ 1.31
SURF1-202ENST00000437995 DIAPH3Q9NSV4 1193 aa23.24■■□□□ 1.31
SURF1-202ENST00000437995 MORF4L1Q9UBU8 362 aa23.24■■□□□ 1.31
SURF1-202ENST00000437995 TMX2Q9Y320 296 aa23.24■■□□□ 1.31
SURF1-202ENST00000437995 CCDC171Q6TFL3 1326 aa23.24■■□□□ 1.31
SURF1-202ENST00000437995 PRDM1O75626 825 aa23.23■■□□□ 1.31
SURF1-202ENST00000437995 EEF2P13639 858 aaKnown RBP23.23■■□□□ 1.31
SURF1-202ENST00000437995 CATSPERGQ6ZRH7 1159 aa23.23■■□□□ 1.31
SURF1-202ENST00000437995 ZNF444Q8N0Y2 327 aaPredicted RBP23.23■■□□□ 1.31
SURF1-202ENST00000437995 GSPT1P15170 499 aaKnown RBP23.22■■□□□ 1.31
SURF1-202ENST00000437995 MFAP1P55081 439 aaKnown RBP23.22■■□□□ 1.31
SURF1-202ENST00000437995 ATP2B2Q01814 1243 aa23.22■■□□□ 1.31
SURF1-202ENST00000437995 LPAR1Q92633 364 aa23.22■■□□□ 1.31
SURF1-202ENST00000437995 VCPKMTQ9H867 229 aa23.22■■□□□ 1.31
SURF1-202ENST00000437995 MYPNQ86TC9 1320 aa23.22■■□□□ 1.31
SURF1-202ENST00000437995 TNPO2O14787 897 aaKnown RBP23.21■■□□□ 1.31
SURF1-202ENST00000437995 HSPD1P10809 573 aaKnown RBP23.21■■□□□ 1.31
SURF1-202ENST00000437995 SLC9C1Q4G0N8 1177 aa23.21■■□□□ 1.31
SURF1-202ENST00000437995 ARMC5Q96C12 935 aa23.21■■□□□ 1.31
SURF1-202ENST00000437995 TXNRD2Q9NNW7 524 aa23.21■■□□□ 1.31
SURF1-202ENST00000437995 ZMYM6O95789 1325 aa23.2■■□□□ 1.3
SURF1-202ENST00000437995 PRKCZQ05513 592 aa23.2■■□□□ 1.3
SURF1-202ENST00000437995 KIAA1755Q5JYT7 1200 aa23.2■■□□□ 1.3
SURF1-202ENST00000437995 CWC27Q6UX04 472 aaKnown RBP23.2■■□□□ 1.3
SURF1-202ENST00000437995 GPRC5AQ8NFJ5 357 aa23.2■■□□□ 1.3
SURF1-202ENST00000437995 RBPJLQ9UBG7 517 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms