RNA–Protein interactions for RNA: ENST00000437124.6

DDR1-237, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-237ENST00000437124 FLT1P17948 1338 aa18.38■□□□□ 0.53
DDR1-237ENST00000437124 PRUNE2Q8WUY3 3088 aa18.37■□□□□ 0.53
DDR1-237ENST00000437124 USP17L10C9JJH3 530 aa18.37■□□□□ 0.53
DDR1-237ENST00000437124 MSCO60682 206 aa18.37■□□□□ 0.53
DDR1-237ENST00000437124 Q3C1V9 767 aa18.37■□□□□ 0.53
DDR1-237ENST00000437124 ERC1Q8IUD2 1116 aa18.37■□□□□ 0.53
DDR1-237ENST00000437124 CCAR1Q8IX12 1150 aaKnown RBP18.37■□□□□ 0.53
DDR1-237ENST00000437124 FAM161BQ96MY7 647 aa18.37■□□□□ 0.53
DDR1-237ENST00000437124 PRDM6Q9NQX0 595 aa18.37■□□□□ 0.53
DDR1-237ENST00000437124 SIPA1L1O43166 1804 aa18.37■□□□□ 0.53
DDR1-237ENST00000437124 CDH23Q9H251 3354 aa18.36■□□□□ 0.53
DDR1-237ENST00000437124 CYP7A1P22680 504 aa18.36■□□□□ 0.53
DDR1-237ENST00000437124 DYNLL1P63167 89 aaKnown RBP18.36■□□□□ 0.53
DDR1-237ENST00000437124 MAP2K5Q13163 448 aa18.36■□□□□ 0.53
DDR1-237ENST00000437124 POTEEQ6S8J3 1075 aa18.36■□□□□ 0.53
DDR1-237ENST00000437124 FOXP4Q8IVH2 680 aaPredicted RBP18.36■□□□□ 0.53
DDR1-237ENST00000437124 CDK5RAP2Q96SN8 1893 aa18.36■□□□□ 0.53
DDR1-237ENST00000437124 CDX2Q99626 313 aaPredicted RBP18.36■□□□□ 0.53
DDR1-237ENST00000437124 SENP6Q9GZR1 1112 aaPredicted RBP18.36■□□□□ 0.53
DDR1-237ENST00000437124 DNAJC18Q9H819 358 aa18.36■□□□□ 0.53
DDR1-237ENST00000437124 PALD1Q9ULE6 856 aa18.36■□□□□ 0.53
DDR1-237ENST00000437124 DNM1LO00429 736 aa18.35■□□□□ 0.53
DDR1-237ENST00000437124 IDH1O75874 414 aaKnown RBP18.35■□□□□ 0.53
DDR1-237ENST00000437124 JAG1P78504 1218 aa18.35■□□□□ 0.53
DDR1-237ENST00000437124 AACSQ86V21 672 aa18.35■□□□□ 0.53
DDR1-237ENST00000437124 LPAR1Q92633 364 aa18.35■□□□□ 0.53
DDR1-237ENST00000437124 EDC3Q96F86 508 aaKnown RBP18.35■□□□□ 0.53
DDR1-237ENST00000437124 PRKAG2Q9UGJ0 569 aa18.35■□□□□ 0.53
DDR1-237ENST00000437124 NDUFB9Q9Y6M9 179 aa18.35■□□□□ 0.53
DDR1-237ENST00000437124 FRMPD3Q5JV73 1810 aa18.35■□□□□ 0.53
DDR1-237ENST00000437124 FOCADQ5VW36 1801 aa18.35■□□□□ 0.53
DDR1-237ENST00000437124 GLRX3O76003 335 aaKnown RBP18.34■□□□□ 0.53
DDR1-237ENST00000437124 HOXC6P09630 235 aa18.34■□□□□ 0.53
DDR1-237ENST00000437124 MS4A1P11836 297 aa18.34■□□□□ 0.53
DDR1-237ENST00000437124 MFSD14CQ5VZR4 134 aa18.34■□□□□ 0.53
DDR1-237ENST00000437124 MAFAQ8NHW3 353 aaPredicted RBP18.34■□□□□ 0.53
DDR1-237ENST00000437124 ANTXR1Q9H6X2 564 aa18.34■□□□□ 0.53
DDR1-237ENST00000437124 DDX20Q9UHI6 824 aaKnown RBP18.34■□□□□ 0.53
DDR1-237ENST00000437124 MUC3AQ02505 3323 aa18.33■□□□□ 0.53
DDR1-237ENST00000437124 LTBP2Q14767 1821 aa18.33■□□□□ 0.53
DDR1-237ENST00000437124 CCNA1P78396 465 aa18.33■□□□□ 0.52
DDR1-237ENST00000437124 HSP90AB4PQ58FF6 505 aa18.33■□□□□ 0.52
DDR1-237ENST00000437124 MAGEB6Q8N7X4 407 aa18.33■□□□□ 0.52
DDR1-237ENST00000437124 RHPN1Q8TCX5 695 aa18.33■□□□□ 0.52
DDR1-237ENST00000437124 PAGR1Q9BTK6 254 aa18.33■□□□□ 0.52
DDR1-237ENST00000437124 SEMA6BQ9H3T3 888 aa18.33■□□□□ 0.52
DDR1-237ENST00000437124 EMILIN3Q9NT22 766 aa18.33■□□□□ 0.52
DDR1-237ENST00000437124 SAP30BPQ9UHR5 308 aaKnown RBP18.33■□□□□ 0.52
DDR1-237ENST00000437124 ZBTB21Q9ULJ3 1066 aa18.33■□□□□ 0.52
DDR1-237ENST00000437124 RABGAP1Q9Y3P9 1069 aa18.33■□□□□ 0.52
DDR1-237ENST00000437124 SLC15A5A6NIM6 579 aa18.32■□□□□ 0.52
DDR1-237ENST00000437124 SHROOM1Q2M3G4 852 aaPredicted RBP18.32■□□□□ 0.52
DDR1-237ENST00000437124 TMED8Q6PL24 325 aaPredicted RBP18.32■□□□□ 0.52
DDR1-237ENST00000437124 CERS3Q8IU89 383 aa18.32■□□□□ 0.52
DDR1-237ENST00000437124 CRACR2BQ8N4Y2 399 aaPredicted RBP18.32■□□□□ 0.52
DDR1-237ENST00000437124 MIGA1Q8NAN2 632 aa18.32■□□□□ 0.52
DDR1-237ENST00000437124 C12orf42Q96LP6 360 aa18.32■□□□□ 0.52
DDR1-237ENST00000437124 TRIM34Q9BYJ4 488 aa18.32■□□□□ 0.52
DDR1-237ENST00000437124 IL1RAPL2Q9NP60 686 aa18.32■□□□□ 0.52
DDR1-237ENST00000437124 FLRT1Q9NZU1 646 aa18.32■□□□□ 0.52
DDR1-237ENST00000437124 IGHA2P01877 340 aa18.31■□□□□ 0.52
DDR1-237ENST00000437124 HLA-DOAP06340 250 aa18.31■□□□□ 0.52
DDR1-237ENST00000437124 ATN1P54259 1190 aaPredicted RBP18.31■□□□□ 0.52
DDR1-237ENST00000437124 RTP1P59025 263 aa18.31■□□□□ 0.52
DDR1-237ENST00000437124 SMAD3P84022 425 aaKnown RBP18.31■□□□□ 0.52
DDR1-237ENST00000437124 MAP3K12Q12852 859 aa18.31■□□□□ 0.52
DDR1-237ENST00000437124 SHHQ15465 462 aa18.31■□□□□ 0.52
DDR1-237ENST00000437124 USP17L2Q6R6M4 530 aa18.31■□□□□ 0.52
DDR1-237ENST00000437124 RPAP2Q8IXW5 612 aaPredicted RBP18.31■□□□□ 0.52
DDR1-237ENST00000437124 SYMPKQ92797 1274 aaKnown RBP18.31■□□□□ 0.52
DDR1-237ENST00000437124 CWC22Q9HCG8 908 aaKnown RBP18.31■□□□□ 0.52
DDR1-237ENST00000437124 ZBTB40Q9NUA8 1239 aa18.31■□□□□ 0.52
DDR1-237ENST00000437124 CNMDO75829 334 aa18.3■□□□□ 0.52
DDR1-237ENST00000437124 GDF11O95390 407 aa18.3■□□□□ 0.52
DDR1-237ENST00000437124 PTPREP23469 700 aa18.3■□□□□ 0.52
DDR1-237ENST00000437124 LBX2Q6XYB7 198 aa18.3■□□□□ 0.52
DDR1-237ENST00000437124 SIRT2Q8IXJ6 389 aa18.3■□□□□ 0.52
DDR1-237ENST00000437124 DDX19BQ9UMR2 479 aa18.3■□□□□ 0.52
DDR1-237ENST00000437124 COG6Q9Y2V7 657 aa18.3■□□□□ 0.52
DDR1-237ENST00000437124 USP17L15C9J2P7 530 aa18.29■□□□□ 0.52
DDR1-237ENST00000437124 USP17L13C9JLJ4 530 aa18.29■□□□□ 0.52
DDR1-237ENST00000437124 USP17L11C9JVI0 530 aa18.29■□□□□ 0.52
DDR1-237ENST00000437124 USP17L18D6R9N7 530 aa18.29■□□□□ 0.52
DDR1-237ENST00000437124 USP17L22D6RA61 530 aa18.29■□□□□ 0.52
DDR1-237ENST00000437124 USP17L17D6RBQ6 530 aa18.29■□□□□ 0.52
DDR1-237ENST00000437124 USP17L19D6RCP7 530 aa18.29■□□□□ 0.52
DDR1-237ENST00000437124 USP17L20D6RJB6 530 aa18.29■□□□□ 0.52
DDR1-237ENST00000437124 USP5P45974 858 aa18.29■□□□□ 0.52
DDR1-237ENST00000437124 USP17L24Q0WX57 530 aa18.29■□□□□ 0.52
DDR1-237ENST00000437124 GRB14Q14449 540 aa18.29■□□□□ 0.52
DDR1-237ENST00000437124 SNX17Q15036 470 aa18.29■□□□□ 0.52
DDR1-237ENST00000437124 ARRDC4Q8NCT1 418 aa18.29■□□□□ 0.52
DDR1-237ENST00000437124 KIF1BPQ96EK5 621 aa18.29■□□□□ 0.52
DDR1-237ENST00000437124 TTYH1Q9H313 450 aaPredicted RBP18.29■□□□□ 0.52
DDR1-237ENST00000437124 TMEM265A0A087WTH1 108 aa18.28■□□□□ 0.52
DDR1-237ENST00000437124 HMMRO75330 724 aa18.28■□□□□ 0.52
DDR1-237ENST00000437124 CNGA1P29973 690 aa18.28■□□□□ 0.52
DDR1-237ENST00000437124 ATP2B2Q01814 1243 aa18.28■□□□□ 0.52
DDR1-237ENST00000437124 TTF1Q15361 905 aaPredicted RBP18.28■□□□□ 0.52
DDR1-237ENST00000437124 C9orf50Q5SZB4 431 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms