RNA–Protein interactions for RNA: ENST00000436712.2

GAPVD1-209, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5

Gene GAPVD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-209ENST00000436712 PABPC4Q13310 644 aaKnown RBP eCLIP8.96□□□□□ -0.97
GAPVD1-209ENST00000436712 SF3B2Q13435 895 aaKnown RBP8.96□□□□□ -0.97
GAPVD1-209ENST00000436712 TAF7Q15545 349 aaPredicted RBP8.96□□□□□ -0.97
GAPVD1-209ENST00000436712 TUBB8Q3ZCM7 444 aa8.96□□□□□ -0.97
GAPVD1-209ENST00000436712 DPY19L2Q6NUT2 758 aa8.96□□□□□ -0.97
GAPVD1-209ENST00000436712 SLC4A10Q6U841 1118 aa8.96□□□□□ -0.97
GAPVD1-209ENST00000436712 FUKQ8N0W3 1084 aa8.96□□□□□ -0.97
GAPVD1-209ENST00000436712 HDAC7Q8WUI4 952 aa8.96□□□□□ -0.97
GAPVD1-209ENST00000436712 TRPV5Q9NQA5 729 aa8.96□□□□□ -0.97
GAPVD1-209ENST00000436712 HDAC6Q9UBN7 1215 aa8.96□□□□□ -0.97
GAPVD1-209ENST00000436712 HOOK1Q9UJC3 728 aaKnown RBP8.96□□□□□ -0.97
GAPVD1-209ENST00000436712 GRIN2DO15399 1336 aa8.96□□□□□ -0.97
GAPVD1-209ENST00000436712 PRAMEF22A3QJZ6 481 aa8.96□□□□□ -0.98
GAPVD1-209ENST00000436712 A6NHS1 94 aa8.96□□□□□ -0.98
GAPVD1-209ENST00000436712 BIN1O00499 593 aa8.96□□□□□ -0.98
GAPVD1-209ENST00000436712 CHMP4BP1P59074 171 aa8.96□□□□□ -0.98
GAPVD1-209ENST00000436712 TMEM62Q0P6H9 643 aa8.96□□□□□ -0.98
GAPVD1-209ENST00000436712 Q4G0T1 1027 aa8.96□□□□□ -0.98
GAPVD1-209ENST00000436712 NSMCE1Q8WV22 266 aa8.96□□□□□ -0.98
GAPVD1-209ENST00000436712 NGLY1Q96IV0 654 aa8.96□□□□□ -0.98
GAPVD1-209ENST00000436712 CAPS2Q9BXY5 557 aa8.96□□□□□ -0.98
GAPVD1-209ENST00000436712 OVOS2A0A0G2JMS6 1433 aa8.96□□□□□ -0.98
GAPVD1-209ENST00000436712 PARP4Q9UKK3 1724 aaKnown RBP8.96□□□□□ -0.98
GAPVD1-209ENST00000436712 GOLGA6L9A6NEM1 432 aa8.95□□□□□ -0.98
GAPVD1-209ENST00000436712 LRRIQ3A6PVS8 624 aaPredicted RBP8.95□□□□□ -0.98
GAPVD1-209ENST00000436712 MGRN1O60291 552 aa8.95□□□□□ -0.98
GAPVD1-209ENST00000436712 EIF2S2P20042 333 aaKnown RBP8.95□□□□□ -0.98
GAPVD1-209ENST00000436712 SLC7A5Q01650 507 aa8.95□□□□□ -0.98
GAPVD1-209ENST00000436712 ARMCX5Q6P1M9 558 aa8.95□□□□□ -0.98
GAPVD1-209ENST00000436712 SRGAP1Q7Z6B7 1085 aa8.95□□□□□ -0.98
GAPVD1-209ENST00000436712 RASSF8Q8NHQ8 419 aa8.95□□□□□ -0.98
GAPVD1-209ENST00000436712 SLC35B4Q969S0 331 aa8.95□□□□□ -0.98
GAPVD1-209ENST00000436712 DHRS1Q96LJ7 313 aa8.95□□□□□ -0.98
GAPVD1-209ENST00000436712 PNKPQ96T60 521 aa8.95□□□□□ -0.98
GAPVD1-209ENST00000436712 POLR3CQ9BUI4 534 aaPredicted RBP8.95□□□□□ -0.98
GAPVD1-209ENST00000436712 CLSTN2Q9H4D0 955 aa8.95□□□□□ -0.98
GAPVD1-209ENST00000436712 ACTR5Q9H9F9 607 aaPredicted RBP8.95□□□□□ -0.98
GAPVD1-209ENST00000436712 WDR37Q9Y2I8 494 aa8.95□□□□□ -0.98
GAPVD1-209ENST00000436712 RIPOR2Q9Y4F9 1068 aa8.95□□□□□ -0.98
GAPVD1-209ENST00000436712 SAMM50Q9Y512 469 aa8.95□□□□□ -0.98
GAPVD1-209ENST00000436712 CEMIPQ8WUJ3 1361 aa8.95□□□□□ -0.98
GAPVD1-209ENST00000436712 ATP10DQ9P241 1426 aa8.95□□□□□ -0.98
GAPVD1-209ENST00000436712 LRP6O75581 1613 aa8.95□□□□□ -0.98
GAPVD1-209ENST00000436712 BECN2A8MW95 431 aa8.95□□□□□ -0.98
GAPVD1-209ENST00000436712 CREB3O43889 395 aa8.95□□□□□ -0.98
GAPVD1-209ENST00000436712 DNM1Q05193 864 aaKnown RBP8.95□□□□□ -0.98
GAPVD1-209ENST00000436712 BLMHQ13867 455 aa8.95□□□□□ -0.98
GAPVD1-209ENST00000436712 ACCSLQ4AC99 568 aa8.95□□□□□ -0.98
GAPVD1-209ENST00000436712 CCDC38Q502W7 563 aa8.95□□□□□ -0.98
GAPVD1-209ENST00000436712 MEX3CQ5U5Q3 659 aaKnown RBP8.95□□□□□ -0.98
GAPVD1-209ENST00000436712 FCHSD1Q86WN1 690 aa8.95□□□□□ -0.98
GAPVD1-209ENST00000436712 RPAP2Q8IXW5 612 aaPredicted RBP8.95□□□□□ -0.98
GAPVD1-209ENST00000436712 IFNL2Q8IZJ0 200 aa8.95□□□□□ -0.98
GAPVD1-209ENST00000436712 SAMD3Q8N6K7 520 aa8.95□□□□□ -0.98
GAPVD1-209ENST00000436712 NACA2Q9H009 215 aa8.95□□□□□ -0.98
GAPVD1-209ENST00000436712 MYO1AQ9UBC5 1043 aa8.95□□□□□ -0.98
GAPVD1-209ENST00000436712 GGA2Q9UJY4 613 aa8.95□□□□□ -0.98
GAPVD1-209ENST00000436712 PKD1L3Q7Z443 1732 aa8.95□□□□□ -0.98
GAPVD1-209ENST00000436712 NDUFAB1O14561 156 aa8.94□□□□□ -0.98
GAPVD1-209ENST00000436712 KIF4AO95239 1232 aa8.94□□□□□ -0.98
GAPVD1-209ENST00000436712 ANXA1P04083 346 aa8.94□□□□□ -0.98
GAPVD1-209ENST00000436712 TRPC1P48995 793 aa8.94□□□□□ -0.98
GAPVD1-209ENST00000436712 INHBCP55103 352 aa8.94□□□□□ -0.98
GAPVD1-209ENST00000436712 PKN1Q16512 942 aa8.94□□□□□ -0.98
GAPVD1-209ENST00000436712 PUS10Q3MIT2 529 aaKnown RBP8.94□□□□□ -0.98
GAPVD1-209ENST00000436712 GNPTABQ3T906 1256 aa8.94□□□□□ -0.98
GAPVD1-209ENST00000436712 APLFQ8IW19 511 aaPredicted RBP8.94□□□□□ -0.98
GAPVD1-209ENST00000436712 SYCP3Q8IZU3 236 aa8.94□□□□□ -0.98
GAPVD1-209ENST00000436712 TBC1D7Q9P0N9 293 aa8.94□□□□□ -0.98
GAPVD1-209ENST00000436712 C15orf41Q9Y2V0 281 aa8.94□□□□□ -0.98
GAPVD1-209ENST00000436712 JCADQ9P266 1359 aa8.94□□□□□ -0.98
GAPVD1-209ENST00000436712 EP400Q96L91 3159 aa8.94□□□□□ -0.98
GAPVD1-209ENST00000436712 SHANK3Q9BYB0 1731 aa8.94□□□□□ -0.98
GAPVD1-209ENST00000436712 SCN11AQ9UI33 1791 aa8.94□□□□□ -0.98
GAPVD1-209ENST00000436712 A0A1B0GVG6 124 aa8.94□□□□□ -0.98
GAPVD1-209ENST00000436712 SMIM24O75264 130 aa8.94□□□□□ -0.98
GAPVD1-209ENST00000436712 VIL1P09327 827 aaKnown RBP8.94□□□□□ -0.98
GAPVD1-209ENST00000436712 SDSP20132 328 aa8.94□□□□□ -0.98
GAPVD1-209ENST00000436712 KBTBD12Q3ZCT8 623 aa8.94□□□□□ -0.98
GAPVD1-209ENST00000436712 CDC37L1Q7L3B6 337 aa8.94□□□□□ -0.98
GAPVD1-209ENST00000436712 TMEM110Q86TL2 294 aa8.94□□□□□ -0.98
GAPVD1-209ENST00000436712 SMYD1Q8NB12 490 aa8.94□□□□□ -0.98
GAPVD1-209ENST00000436712 LEO1Q8WVC0 666 aaPredicted RBP8.94□□□□□ -0.98
GAPVD1-209ENST00000436712 TRAIPQ9BWF2 469 aa8.94□□□□□ -0.98
GAPVD1-209ENST00000436712 DACT1Q9NYF0 836 aa8.94□□□□□ -0.98
GAPVD1-209ENST00000436712 PHF24Q9UPV7 400 aa8.94□□□□□ -0.98
GAPVD1-209ENST00000436712 THRAP3Q9Y2W1 955 aaKnown RBP8.94□□□□□ -0.98
GAPVD1-209ENST00000436712 WDHD1O75717 1129 aaPredicted RBP8.93□□□□□ -0.98
GAPVD1-209ENST00000436712 ATP4AP20648 1035 aa8.93□□□□□ -0.98
GAPVD1-209ENST00000436712 DYNC1I2Q13409 638 aaKnown RBP8.93□□□□□ -0.98
GAPVD1-209ENST00000436712 NRAPQ86VF7 1730 aa8.93□□□□□ -0.98
GAPVD1-209ENST00000436712 PCDH11XQ9BZA7 1347 aa8.93□□□□□ -0.98
GAPVD1-209ENST00000436712 PCDH11YQ9BZA8 1340 aa8.93□□□□□ -0.98
GAPVD1-209ENST00000436712 ZWILCHQ9H900 591 aa8.93□□□□□ -0.98
GAPVD1-209ENST00000436712 ATP8A1Q9Y2Q0 1164 aa8.93□□□□□ -0.98
GAPVD1-209ENST00000436712 VWA3AA6NCI4 1184 aa8.93□□□□□ -0.98
GAPVD1-209ENST00000436712 TMEM221A6NGB7 291 aa8.93□□□□□ -0.98
GAPVD1-209ENST00000436712 SLC27A2O14975 620 aa8.93□□□□□ -0.98
GAPVD1-209ENST00000436712 BUB1BO60566 1050 aaPredicted RBP8.93□□□□□ -0.98
GAPVD1-209ENST00000436712 CUTAO60888 179 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms