RNA–Protein interactions for RNA: ENST00000436564.5

COPS7B-212, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-212ENST00000436564 TBC1D9Q6ZT07 1266 aa13.38□□□□□ -0.27
COPS7B-212ENST00000436564 FAM9BQ8IZU0 186 aa13.38□□□□□ -0.27
COPS7B-212ENST00000436564 GTF3C2Q8WUA4 911 aaPredicted RBP13.38□□□□□ -0.27
COPS7B-212ENST00000436564 USP6NLQ92738 828 aa13.38□□□□□ -0.27
COPS7B-212ENST00000436564 NSUN4Q96CB9 384 aaKnown RBP13.38□□□□□ -0.27
COPS7B-212ENST00000436564 NEUROD6Q96NK8 337 aa13.38□□□□□ -0.27
COPS7B-212ENST00000436564 NOL10Q9BSC4 688 aaKnown RBP13.38□□□□□ -0.27
COPS7B-212ENST00000436564 TRIM34Q9BYJ4 488 aa13.38□□□□□ -0.27
COPS7B-212ENST00000436564 PORCNQ9H237 461 aa13.38□□□□□ -0.27
COPS7B-212ENST00000436564 DHX36Q9H2U1 1008 aaKnown RBP13.38□□□□□ -0.27
COPS7B-212ENST00000436564 RAI14Q9P0K7 980 aa13.38□□□□□ -0.27
COPS7B-212ENST00000436564 ALPK3Q96L96 1907 aa13.38□□□□□ -0.27
COPS7B-212ENST00000436564 DOCK1Q14185 1865 aa13.38□□□□□ -0.27
COPS7B-212ENST00000436564 SPTBN5Q9NRC6 3674 aaKnown RBP13.37□□□□□ -0.27
COPS7B-212ENST00000436564 DDX60LQ5H9U9 1706 aaKnown RBP13.37□□□□□ -0.27
COPS7B-212ENST00000436564 ANP32CO43423 234 aa13.37□□□□□ -0.27
COPS7B-212ENST00000436564 GLRX3O76003 335 aaKnown RBP13.37□□□□□ -0.27
COPS7B-212ENST00000436564 GORABQ5T7V8 394 aa13.37□□□□□ -0.27
COPS7B-212ENST00000436564 MFSD14CQ5VZR4 134 aa13.37□□□□□ -0.27
COPS7B-212ENST00000436564 ZNF710Q8N1W2 664 aa13.37□□□□□ -0.27
COPS7B-212ENST00000436564 CRACR2BQ8N4Y2 399 aaPredicted RBP13.37□□□□□ -0.27
COPS7B-212ENST00000436564 SPATA5Q8NB90 893 aa13.37□□□□□ -0.27
COPS7B-212ENST00000436564 EDC3Q96F86 508 aaKnown RBP13.37□□□□□ -0.27
COPS7B-212ENST00000436564 HMG20BQ9P0W2 317 aa13.37□□□□□ -0.27
COPS7B-212ENST00000436564 COL2A1P02458 1487 aaPredicted RBP13.36□□□□□ -0.27
COPS7B-212ENST00000436564 CNGA1P29973 690 aa13.36□□□□□ -0.27
COPS7B-212ENST00000436564 TFCP2Q12800 502 aa13.36□□□□□ -0.27
COPS7B-212ENST00000436564 MAP2K5Q13163 448 aa13.36□□□□□ -0.27
COPS7B-212ENST00000436564 WDR78Q5VTH9 848 aa13.36□□□□□ -0.27
COPS7B-212ENST00000436564 MAFAQ8NHW3 353 aaPredicted RBP13.36□□□□□ -0.27
COPS7B-212ENST00000436564 SH3RF3Q8TEJ3 882 aaPredicted RBP13.36□□□□□ -0.27
COPS7B-212ENST00000436564 CDX2Q99626 313 aaPredicted RBP13.36□□□□□ -0.27
COPS7B-212ENST00000436564 SMC4Q9NTJ3 1288 aa13.36□□□□□ -0.27
COPS7B-212ENST00000436564 LRP2BPQ9P2M1 347 aa13.36□□□□□ -0.27
COPS7B-212ENST00000436564 DDX20Q9UHI6 824 aaKnown RBP13.36□□□□□ -0.27
COPS7B-212ENST00000436564 DNAH12Q6ZR08 3092 aa13.36□□□□□ -0.27
COPS7B-212ENST00000436564 MSCO60682 206 aa13.35□□□□□ -0.27
COPS7B-212ENST00000436564 BAG3O95817 575 aa13.35□□□□□ -0.27
COPS7B-212ENST00000436564 CCNA1P78396 465 aa13.35□□□□□ -0.27
COPS7B-212ENST00000436564 FOXK1P85037 733 aa13.35□□□□□ -0.27
COPS7B-212ENST00000436564 ALDH1L2Q3SY69 923 aa13.35□□□□□ -0.27
COPS7B-212ENST00000436564 PI16Q6UXB8 463 aa13.35□□□□□ -0.27
COPS7B-212ENST00000436564 TMEM92Q6UXU6 159 aa13.35□□□□□ -0.27
COPS7B-212ENST00000436564 FOXP4Q8IVH2 680 aaPredicted RBP13.35□□□□□ -0.27
COPS7B-212ENST00000436564 LPAR1Q92633 364 aa13.35□□□□□ -0.27
COPS7B-212ENST00000436564 PRDM6Q9NQX0 595 aa13.35□□□□□ -0.27
COPS7B-212ENST00000436564 GINM1Q9NU53 330 aa13.35□□□□□ -0.27
COPS7B-212ENST00000436564 PHIPQ8WWQ0 1821 aa13.34□□□□□ -0.27
COPS7B-212ENST00000436564 E9PSI1 815 aa13.34□□□□□ -0.27
COPS7B-212ENST00000436564 DNM1LO00429 736 aa13.34□□□□□ -0.27
COPS7B-212ENST00000436564 GDF11O95390 407 aa13.34□□□□□ -0.27
COPS7B-212ENST00000436564 JAG1P78504 1218 aa13.34□□□□□ -0.27
COPS7B-212ENST00000436564 ATP2B2Q01814 1243 aa13.34□□□□□ -0.27
COPS7B-212ENST00000436564 USP17L2Q6R6M4 530 aa13.34□□□□□ -0.27
COPS7B-212ENST00000436564 MAPKAPK5Q8IW41 473 aa13.34□□□□□ -0.27
COPS7B-212ENST00000436564 SEMA6BQ9H3T3 888 aa13.34□□□□□ -0.27
COPS7B-212ENST00000436564 AATFQ9NY61 560 aaKnown RBP eCLIP13.34□□□□□ -0.27
COPS7B-212ENST00000436564 ZBTB21Q9ULJ3 1066 aa13.34□□□□□ -0.27
COPS7B-212ENST00000436564 ATP11BQ9Y2G3 1177 aa13.34□□□□□ -0.27
COPS7B-212ENST00000436564 RABGAP1Q9Y3P9 1069 aa13.34□□□□□ -0.27
COPS7B-212ENST00000436564 NDUFB9Q9Y6M9 179 aa13.34□□□□□ -0.27
COPS7B-212ENST00000436564 PTPRFP10586 1907 aa13.34□□□□□ -0.27
COPS7B-212ENST00000436564 ZNF521Q96K83 1311 aa13.34□□□□□ -0.27
COPS7B-212ENST00000436564 DOCK3Q8IZD9 2030 aa13.34□□□□□ -0.27
COPS7B-212ENST00000436564 MYH13Q9UKX3 1938 aa13.33□□□□□ -0.28
COPS7B-212ENST00000436564 SRGAP3O43295 1099 aa13.33□□□□□ -0.28
COPS7B-212ENST00000436564 RTP1P59025 263 aa13.33□□□□□ -0.28
COPS7B-212ENST00000436564 SHHQ15465 462 aa13.33□□□□□ -0.28
COPS7B-212ENST00000436564 SHROOM1Q2M3G4 852 aaPredicted RBP13.33□□□□□ -0.28
COPS7B-212ENST00000436564 NAA16Q6N069 864 aaPredicted RBP13.33□□□□□ -0.28
COPS7B-212ENST00000436564 TGFBRAP1Q8WUH2 860 aa13.33□□□□□ -0.28
COPS7B-212ENST00000436564 DNAJC18Q9H819 358 aa13.33□□□□□ -0.28
COPS7B-212ENST00000436564 ZSWIM6Q9HCJ5 1215 aa13.33□□□□□ -0.28
COPS7B-212ENST00000436564 PRDM5Q9NQX1 630 aaPredicted RBP13.33□□□□□ -0.28
COPS7B-212ENST00000436564 EMILIN3Q9NT22 766 aa13.33□□□□□ -0.28
COPS7B-212ENST00000436564 FLRT1Q9NZU1 646 aa13.33□□□□□ -0.28
COPS7B-212ENST00000436564 IVNS1ABPQ9Y6Y0 642 aa13.33□□□□□ -0.28
COPS7B-212ENST00000436564 CDH23Q9H251 3354 aa13.33□□□□□ -0.28
COPS7B-212ENST00000436564 PRUNE2Q8WUY3 3088 aa13.33□□□□□ -0.28
COPS7B-212ENST00000436564 LOC285556D6RIA3 1793 aa13.32□□□□□ -0.28
COPS7B-212ENST00000436564 SLC15A5A6NIM6 579 aa13.32□□□□□ -0.28
COPS7B-212ENST00000436564 USP17L15C9J2P7 530 aa13.32□□□□□ -0.28
COPS7B-212ENST00000436564 USP17L13C9JLJ4 530 aa13.32□□□□□ -0.28
COPS7B-212ENST00000436564 USP17L11C9JVI0 530 aa13.32□□□□□ -0.28
COPS7B-212ENST00000436564 USP17L18D6R9N7 530 aa13.32□□□□□ -0.28
COPS7B-212ENST00000436564 USP17L22D6RA61 530 aa13.32□□□□□ -0.28
COPS7B-212ENST00000436564 USP17L17D6RBQ6 530 aa13.32□□□□□ -0.28
COPS7B-212ENST00000436564 USP17L19D6RCP7 530 aa13.32□□□□□ -0.28
COPS7B-212ENST00000436564 USP17L20D6RJB6 530 aa13.32□□□□□ -0.28
COPS7B-212ENST00000436564 PTPREP23469 700 aa13.32□□□□□ -0.28
COPS7B-212ENST00000436564 USP17L24Q0WX57 530 aa13.32□□□□□ -0.28
COPS7B-212ENST00000436564 POTEEQ6S8J3 1075 aa13.32□□□□□ -0.28
COPS7B-212ENST00000436564 ATF7IPQ6VMQ6 1270 aa13.32□□□□□ -0.28
COPS7B-212ENST00000436564 METTL16Q86W50 562 aaKnown RBP13.32□□□□□ -0.28
COPS7B-212ENST00000436564 MYLIPQ8WY64 445 aa13.32□□□□□ -0.28
COPS7B-212ENST00000436564 SYMPKQ92797 1274 aaKnown RBP13.32□□□□□ -0.28
COPS7B-212ENST00000436564 DDX27Q96GQ7 796 aaKnown RBP13.32□□□□□ -0.28
COPS7B-212ENST00000436564 MEIS3Q99687 375 aa13.32□□□□□ -0.28
COPS7B-212ENST00000436564 FEZ1Q99689 392 aa13.32□□□□□ -0.28
COPS7B-212ENST00000436564 LARP6Q9BRS8 491 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms