RNA–Protein interactions for RNA: ENST00000436324.5

HMGN1-207, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-207ENST00000436324 LNPKQ9C0E8 428 aa21.98■■□□□ 1.11
HMGN1-207ENST00000436324 SALL3Q9BXA9 1300 aa21.98■■□□□ 1.11
HMGN1-207ENST00000436324 MYH7P12883 1935 aa21.98■■□□□ 1.11
HMGN1-207ENST00000436324 GPAA1O43292 621 aa21.97■■□□□ 1.11
HMGN1-207ENST00000436324 PEX10O60683 326 aa21.97■■□□□ 1.11
HMGN1-207ENST00000436324 IGHDP01880 384 aa21.97■■□□□ 1.11
HMGN1-207ENST00000436324 AKR1B1P15121 316 aa21.97■■□□□ 1.11
HMGN1-207ENST00000436324 HOXA7P31268 230 aaPredicted RBP21.97■■□□□ 1.11
HMGN1-207ENST00000436324 CDK8P49336 464 aa21.97■■□□□ 1.11
HMGN1-207ENST00000436324 FAM110CQ1W6H9 321 aa21.97■■□□□ 1.11
HMGN1-207ENST00000436324 LRRFIP1Q32MZ4 808 aaKnown RBP21.97■■□□□ 1.11
HMGN1-207ENST00000436324 STK11IPQ8N1F8 1099 aa21.97■■□□□ 1.11
HMGN1-207ENST00000436324 SEC62Q99442 399 aaKnown RBP21.97■■□□□ 1.11
HMGN1-207ENST00000436324 GSG1L2A8MUP6 293 aa21.96■■□□□ 1.11
HMGN1-207ENST00000436324 USP14P54578 494 aa21.96■■□□□ 1.11
HMGN1-207ENST00000436324 TMEM106CQ9BVX2 250 aa21.96■■□□□ 1.11
HMGN1-207ENST00000436324 KIAA1683Q9H0B3 1180 aa21.96■■□□□ 1.11
HMGN1-207ENST00000436324 MINDY4BA8MYZ0 360 aa21.95■■□□□ 1.1
HMGN1-207ENST00000436324 APPP05067 770 aa21.95■■□□□ 1.1
HMGN1-207ENST00000436324 PDE1AP54750 535 aa21.95■■□□□ 1.1
HMGN1-207ENST00000436324 HERVK_113P62684 666 aa21.95■■□□□ 1.1
HMGN1-207ENST00000436324 IRX6P78412 446 aaPredicted RBP21.95■■□□□ 1.1
HMGN1-207ENST00000436324 C16orf86Q6ZW13 317 aa21.95■■□□□ 1.1
HMGN1-207ENST00000436324 CLEC10AQ8IUN9 316 aa21.95■■□□□ 1.1
HMGN1-207ENST00000436324 BIN2Q9UBW5 565 aaPredicted RBP21.95■■□□□ 1.1
HMGN1-207ENST00000436324 TAOK2Q9UL54 1235 aa21.95■■□□□ 1.1
HMGN1-207ENST00000436324 BAZ2AQ9UIF9 1905 aaKnown RBP21.94■■□□□ 1.1
HMGN1-207ENST00000436324 GRK4P32298 578 aa21.94■■□□□ 1.1
HMGN1-207ENST00000436324 FLT3LGP49771 235 aa21.94■■□□□ 1.1
HMGN1-207ENST00000436324 TMEM179Q6ZVK1 233 aa21.94■■□□□ 1.1
HMGN1-207ENST00000436324 COA7Q96BR5 231 aa21.94■■□□□ 1.1
HMGN1-207ENST00000436324 C12orf42Q96LP6 360 aa21.94■■□□□ 1.1
HMGN1-207ENST00000436324 PAGR1Q9BTK6 254 aa21.94■■□□□ 1.1
HMGN1-207ENST00000436324 ARPP21Q9UBL0 812 aaPredicted RBP21.94■■□□□ 1.1
HMGN1-207ENST00000436324 STAP2Q9UGK3 403 aa21.94■■□□□ 1.1
HMGN1-207ENST00000436324 A0A1W2PRG0 241 aa21.93■■□□□ 1.1
HMGN1-207ENST00000436324 USP17L15C9J2P7 530 aa21.93■■□□□ 1.1
HMGN1-207ENST00000436324 USP17L13C9JLJ4 530 aa21.93■■□□□ 1.1
HMGN1-207ENST00000436324 USP17L11C9JVI0 530 aa21.93■■□□□ 1.1
HMGN1-207ENST00000436324 USP17L18D6R9N7 530 aa21.93■■□□□ 1.1
HMGN1-207ENST00000436324 USP17L22D6RA61 530 aa21.93■■□□□ 1.1
HMGN1-207ENST00000436324 USP17L17D6RBQ6 530 aa21.93■■□□□ 1.1
HMGN1-207ENST00000436324 USP17L19D6RCP7 530 aa21.93■■□□□ 1.1
HMGN1-207ENST00000436324 USP17L20D6RJB6 530 aa21.93■■□□□ 1.1
HMGN1-207ENST00000436324 VCAM1P19320 739 aa21.93■■□□□ 1.1
HMGN1-207ENST00000436324 EN2P19622 333 aaPredicted RBP21.93■■□□□ 1.1
HMGN1-207ENST00000436324 TDO2P48775 406 aa21.93■■□□□ 1.1
HMGN1-207ENST00000436324 USP17L24Q0WX57 530 aa21.93■■□□□ 1.1
HMGN1-207ENST00000436324 SMC5Q8IY18 1101 aa21.93■■□□□ 1.1
HMGN1-207ENST00000436324 EPB41L4AQ9HCS5 686 aaPredicted RBP21.93■■□□□ 1.1
HMGN1-207ENST00000436324 TXNRD2Q9NNW7 524 aa21.93■■□□□ 1.1
HMGN1-207ENST00000436324 GNAT2P19087 354 aa21.92■■□□□ 1.1
HMGN1-207ENST00000436324 MTFR1Q15390 333 aa21.92■■□□□ 1.1
HMGN1-207ENST00000436324 ZMYM1Q5SVZ6 1142 aa21.92■■□□□ 1.1
HMGN1-207ENST00000436324 GIMAP6Q6P9H5 292 aa21.92■■□□□ 1.1
HMGN1-207ENST00000436324 CCDC17Q96LX7 622 aa21.92■■□□□ 1.1
HMGN1-207ENST00000436324 RPAP3Q9H6T3 665 aaPredicted RBP21.92■■□□□ 1.1
HMGN1-207ENST00000436324 RBPJLQ9UBG7 517 aa21.92■■□□□ 1.1
HMGN1-207ENST00000436324 MORF4L1Q9UBU8 362 aa21.92■■□□□ 1.1
HMGN1-207ENST00000436324 PATL2C9JE40 543 aaKnown RBP21.91■■□□□ 1.1
HMGN1-207ENST00000436324 ADCY3O60266 1144 aa21.91■■□□□ 1.1
HMGN1-207ENST00000436324 ATP2B2Q01814 1243 aa21.91■■□□□ 1.1
HMGN1-207ENST00000436324 ICA1Q05084 483 aa21.91■■□□□ 1.1
HMGN1-207ENST00000436324 SBK1Q52WX2 424 aa21.91■■□□□ 1.1
HMGN1-207ENST00000436324 CATSPERGQ6ZRH7 1159 aa21.91■■□□□ 1.1
HMGN1-207ENST00000436324 GPRC5AQ8NFJ5 357 aa21.91■■□□□ 1.1
HMGN1-207ENST00000436324 ELNP15502 786 aa21.9■■□□□ 1.1
HMGN1-207ENST00000436324 Q3C1V9 767 aa21.9■■□□□ 1.1
HMGN1-207ENST00000436324 CCDC129Q6ZRS4 1044 aa21.9■■□□□ 1.1
HMGN1-207ENST00000436324 CHD1LQ86WJ1 897 aa21.9■■□□□ 1.1
HMGN1-207ENST00000436324 SIAH1Q8IUQ4 282 aa21.9■■□□□ 1.1
HMGN1-207ENST00000436324 IFNL3Q8IZI9 196 aa21.9■■□□□ 1.1
HMGN1-207ENST00000436324 EVI5LQ96CN4 794 aa21.9■■□□□ 1.1
HMGN1-207ENST00000436324 ARHGEF10LQ9HCE6 1279 aa21.9■■□□□ 1.1
HMGN1-207ENST00000436324 KIAA1755Q5JYT7 1200 aa21.89■■□□□ 1.09
HMGN1-207ENST00000436324 POTEEQ6S8J3 1075 aa21.89■■□□□ 1.09
HMGN1-207ENST00000436324 SLAIN1Q8ND83 568 aa21.89■■□□□ 1.09
HMGN1-207ENST00000436324 MKNK2Q9HBH9 465 aa21.89■■□□□ 1.09
HMGN1-207ENST00000436324 MGAMO43451 1857 aa21.89■■□□□ 1.09
HMGN1-207ENST00000436324 ERVK-9P63128 1117 aa21.88■■□□□ 1.09
HMGN1-207ENST00000436324 ERVK-24P63145 666 aa21.88■■□□□ 1.09
HMGN1-207ENST00000436324 NUCB1Q02818 461 aa21.88■■□□□ 1.09
HMGN1-207ENST00000436324 CCAR1Q8IX12 1150 aaKnown RBP21.88■■□□□ 1.09
HMGN1-207ENST00000436324 SPICE1Q8N0Z3 855 aa21.88■■□□□ 1.09
HMGN1-207ENST00000436324 GTF3C2Q8WUA4 911 aaPredicted RBP21.88■■□□□ 1.09
HMGN1-207ENST00000436324 NACAP1Q9BZK3 213 aa21.88■■□□□ 1.09
HMGN1-207ENST00000436324 TANGO6Q9C0B7 1094 aa21.88■■□□□ 1.09
HMGN1-207ENST00000436324 TRIM6-TRIM34B2RNG4 842 aa21.87■■□□□ 1.09
HMGN1-207ENST00000436324 EEF2P13639 858 aaKnown RBP21.87■■□□□ 1.09
HMGN1-207ENST00000436324 RASA1P20936 1047 aa21.87■■□□□ 1.09
HMGN1-207ENST00000436324 UBXN2AP68543 259 aa21.87■■□□□ 1.09
HMGN1-207ENST00000436324 PORCNQ9H237 461 aa21.87■■□□□ 1.09
HMGN1-207ENST00000436324 PRDM1O75626 825 aa21.86■■□□□ 1.09
HMGN1-207ENST00000436324 CNMDO75829 334 aa21.86■■□□□ 1.09
HMGN1-207ENST00000436324 CCL5P13501 91 aa21.86■■□□□ 1.09
HMGN1-207ENST00000436324 IRF5Q13568 498 aa21.86■■□□□ 1.09
HMGN1-207ENST00000436324 SAMD1Q6SPF0 538 aaPredicted RBP21.86■■□□□ 1.09
HMGN1-207ENST00000436324 RILPL2Q969X0 211 aa21.86■■□□□ 1.09
HMGN1-207ENST00000436324 NAPBQ9H115 298 aa21.86■■□□□ 1.09
HMGN1-207ENST00000436324 SH2D4AQ9H788 454 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms