RNA–Protein interactions for RNA: ENST00000433645.1

LINC01239-201, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 3

Gene LINC01239, Length 325 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-201ENST00000433645 RGS13O14921 159 aa5.64□□□□□ -1.51
LINC01239-201ENST00000433645 SOX9P48436 509 aa5.64□□□□□ -1.51
LINC01239-201ENST00000433645 PAK2Q13177 524 aa5.64□□□□□ -1.51
LINC01239-201ENST00000433645 INTS3Q68E01 1043 aaKnown RBP5.64□□□□□ -1.51
LINC01239-201ENST00000433645 TAB3Q8N5C8 712 aaPredicted RBP5.64□□□□□ -1.51
LINC01239-201ENST00000433645 RIN3Q8TB24 985 aa5.64□□□□□ -1.51
LINC01239-201ENST00000433645 GPRASP2Q96D09 838 aa5.64□□□□□ -1.51
LINC01239-201ENST00000433645 SEC16BQ96JE7 1060 aa5.64□□□□□ -1.51
LINC01239-201ENST00000433645 CNNM2Q9H8M5 875 aa5.64□□□□□ -1.51
LINC01239-201ENST00000433645 UPK3BL1B0FP48 263 aa5.63□□□□□ -1.51
LINC01239-201ENST00000433645 CHURC1-FNTBB4DL54 471 aa5.63□□□□□ -1.51
LINC01239-201ENST00000433645 UPK3BL2E5RIL1 263 aa5.63□□□□□ -1.51
LINC01239-201ENST00000433645 DNAJA2O60884 412 aa5.63□□□□□ -1.51
LINC01239-201ENST00000433645 MCM4P33991 863 aa5.63□□□□□ -1.51
LINC01239-201ENST00000433645 CLCQ05315 142 aa5.63□□□□□ -1.51
LINC01239-201ENST00000433645 THAP5Q7Z6K1 395 aa5.63□□□□□ -1.51
LINC01239-201ENST00000433645 SPACA3Q8IXA5 215 aa5.63□□□□□ -1.51
LINC01239-201ENST00000433645 PLD6Q8N2A8 252 aaKnown RBP5.63□□□□□ -1.51
LINC01239-201ENST00000433645 MFSD4AQ8N468 514 aa5.63□□□□□ -1.51
LINC01239-201ENST00000433645 RNF141Q8WVD5 230 aa5.63□□□□□ -1.51
LINC01239-201ENST00000433645 TMEM40Q8WWA1 233 aa5.63□□□□□ -1.51
LINC01239-201ENST00000433645 ZNF428Q96B54 188 aa5.63□□□□□ -1.51
LINC01239-201ENST00000433645 DPH2Q9BQC3 489 aaPredicted RBP5.63□□□□□ -1.51
LINC01239-201ENST00000433645 ASPNQ9BXN1 380 aa5.63□□□□□ -1.51
LINC01239-201ENST00000433645 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.63□□□□□ -1.51
LINC01239-201ENST00000433645 KLHL3Q9UH77 587 aa5.63□□□□□ -1.51
LINC01239-201ENST00000433645 ANGEL1Q9UNK9 670 aaKnown RBP5.63□□□□□ -1.51
LINC01239-201ENST00000433645 PLAGL2Q9UPG8 496 aa5.63□□□□□ -1.51
LINC01239-201ENST00000433645 SLC5A6Q9Y289 635 aa5.63□□□□□ -1.51
LINC01239-201ENST00000433645 CAPN6Q9Y6Q1 641 aa5.63□□□□□ -1.51
LINC01239-201ENST00000433645 TNFRSF10CO14798 259 aa5.62□□□□□ -1.51
LINC01239-201ENST00000433645 NKPD1Q17RQ9 610 aa5.62□□□□□ -1.51
LINC01239-201ENST00000433645 GK5Q6ZS86 529 aa5.62□□□□□ -1.51
LINC01239-201ENST00000433645 NLRC3Q7RTR2 1065 aa5.62□□□□□ -1.51
LINC01239-201ENST00000433645 NBPF11Q86T75 865 aa5.62□□□□□ -1.51
LINC01239-201ENST00000433645 FAM181AQ8N9Y4 354 aa5.62□□□□□ -1.51
LINC01239-201ENST00000433645 AGBL5Q8NDL9 886 aa5.62□□□□□ -1.51
LINC01239-201ENST00000433645 XAGE3Q8WTP9 111 aa5.62□□□□□ -1.51
LINC01239-201ENST00000433645 BCL7CQ8WUZ0 217 aaPredicted RBP5.62□□□□□ -1.51
LINC01239-201ENST00000433645 ASB11Q8WXH4 323 aa5.62□□□□□ -1.51
LINC01239-201ENST00000433645 ATG4CQ96DT6 458 aa5.62□□□□□ -1.51
LINC01239-201ENST00000433645 HRASLS5Q96KN8 279 aa5.62□□□□□ -1.51
LINC01239-201ENST00000433645 TM9SF2Q99805 663 aa5.62□□□□□ -1.51
LINC01239-201ENST00000433645 CCSER2Q9H7U1 834 aa5.62□□□□□ -1.51
LINC01239-201ENST00000433645 COL17A1Q9UMD9 1497 aaPredicted RBP5.62□□□□□ -1.51
LINC01239-201ENST00000433645 NME1P15531 152 aaKnown RBP5.61□□□□□ -1.51
LINC01239-201ENST00000433645 RAG1P15918 1043 aa5.61□□□□□ -1.51
LINC01239-201ENST00000433645 ERCC5P28715 1186 aaPredicted RBP5.61□□□□□ -1.51
LINC01239-201ENST00000433645 ARSHQ5FYA8 562 aa5.61□□□□□ -1.51
LINC01239-201ENST00000433645 C9orf131Q5VYM1 1079 aa5.61□□□□□ -1.51
LINC01239-201ENST00000433645 OVOS1Q6IE37 1185 aa5.61□□□□□ -1.51
LINC01239-201ENST00000433645 CDH24Q86UP0 819 aa5.61□□□□□ -1.51
LINC01239-201ENST00000433645 PHACTR4Q8IZ21 702 aa5.61□□□□□ -1.51
LINC01239-201ENST00000433645 VWCEQ96DN2 955 aa5.61□□□□□ -1.51
LINC01239-201ENST00000433645 KCNH3Q9ULD8 1083 aa5.61□□□□□ -1.51
LINC01239-201ENST00000433645 STRIP2Q9ULQ0 834 aa5.61□□□□□ -1.51
LINC01239-201ENST00000433645 U3KQE9 123 aa5.61□□□□□ -1.51
LINC01239-201ENST00000433645 CNTNAP4Q9C0A0 1308 aa5.6□□□□□ -1.51
LINC01239-201ENST00000433645 FAM155AB1AL88 458 aaPredicted RBP5.6□□□□□ -1.51
LINC01239-201ENST00000433645 GP2P55259 537 aaKnown RBP5.6□□□□□ -1.51
LINC01239-201ENST00000433645 RNF4P78317 190 aa5.6□□□□□ -1.51
LINC01239-201ENST00000433645 GNL2Q13823 731 aaKnown RBP5.6□□□□□ -1.51
LINC01239-201ENST00000433645 NFXL1Q6ZNB6 911 aa5.6□□□□□ -1.51
LINC01239-201ENST00000433645 OR6P1Q8NGX9 317 aa5.6□□□□□ -1.51
LINC01239-201ENST00000433645 FERD3LQ96RJ6 166 aa5.6□□□□□ -1.51
LINC01239-201ENST00000433645 GINM1Q9NU53 330 aa5.6□□□□□ -1.51
LINC01239-201ENST00000433645 LMCD1Q9NZU5 365 aa5.6□□□□□ -1.51
LINC01239-201ENST00000433645 INPP5FQ9Y2H2 1132 aa5.6□□□□□ -1.51
LINC01239-201ENST00000433645 ST14Q9Y5Y6 855 aa5.6□□□□□ -1.51
LINC01239-201ENST00000433645 PITPNM2Q9BZ72 1349 aa5.59□□□□□ -1.51
LINC01239-201ENST00000433645 ADAMTS4O75173 837 aa5.59□□□□□ -1.51
LINC01239-201ENST00000433645 UBOX5O94941 541 aa5.59□□□□□ -1.51
LINC01239-201ENST00000433645 ITIH2P19823 946 aa5.59□□□□□ -1.51
LINC01239-201ENST00000433645 GBP1P32455 592 aa5.59□□□□□ -1.51
LINC01239-201ENST00000433645 TNNI2P48788 182 aa5.59□□□□□ -1.51
LINC01239-201ENST00000433645 AOC3Q16853 763 aa5.59□□□□□ -1.51
LINC01239-201ENST00000433645 VPS37DQ86XT2 251 aa5.59□□□□□ -1.51
LINC01239-201ENST00000433645 WFDC3Q8IUB2 231 aa5.59□□□□□ -1.51
LINC01239-201ENST00000433645 BAHD1Q8TBE0 780 aaPredicted RBP5.59□□□□□ -1.51
LINC01239-201ENST00000433645 DHRS1Q96LJ7 313 aa5.59□□□□□ -1.51
LINC01239-201ENST00000433645 KREMEN1Q96MU8 473 aa5.59□□□□□ -1.51
LINC01239-201ENST00000433645 KIF2CQ99661 725 aa5.59□□□□□ -1.51
LINC01239-201ENST00000433645 GPR62Q9BZJ7 368 aa5.59□□□□□ -1.51
LINC01239-201ENST00000433645 ACBD3Q9H3P7 528 aa5.59□□□□□ -1.51
LINC01239-201ENST00000433645 PAK6Q9NQU5 681 aaPredicted RBP5.59□□□□□ -1.51
LINC01239-201ENST00000433645 EFR3BQ9Y2G0 817 aa5.59□□□□□ -1.51
LINC01239-201ENST00000433645 PRR33A8MZF0 331 aa5.58□□□□□ -1.52
LINC01239-201ENST00000433645 SRFP11831 508 aa5.58□□□□□ -1.52
LINC01239-201ENST00000433645 GIPRP48546 466 aa5.58□□□□□ -1.52
LINC01239-201ENST00000433645 TNK2Q07912 1038 aa5.58□□□□□ -1.52
LINC01239-201ENST00000433645 TMPRSS7Q7RTY8 843 aa5.58□□□□□ -1.52
LINC01239-201ENST00000433645 C19orf47Q8N9M1 422 aaKnown RBP5.58□□□□□ -1.52
LINC01239-201ENST00000433645 DTWD2Q8NBA8 298 aa5.58□□□□□ -1.52
LINC01239-201ENST00000433645 SLC43A3Q8NBI5 491 aa5.58□□□□□ -1.52
LINC01239-201ENST00000433645 ENOX1Q8TC92 643 aaKnown RBP5.58□□□□□ -1.52
LINC01239-201ENST00000433645 Q96M66 194 aa5.58□□□□□ -1.52
LINC01239-201ENST00000433645 CRBNQ96SW2 442 aa5.58□□□□□ -1.52
LINC01239-201ENST00000433645 TRIT1Q9H3H1 467 aaKnown RBP5.58□□□□□ -1.52
LINC01239-201ENST00000433645 SEMA3GQ9NS98 782 aa5.58□□□□□ -1.52
LINC01239-201ENST00000433645 CBX7O95931 251 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms