RNA–Protein interactions for RNA: ENST00000430804.5

LRRK2-204, Transcript of leucine rich repeat kinase 2, humanhuman

TSL 1 (best)

Gene LRRK2, Length 6,400 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2-204ENST00000430804 TSR2Q969E8 191 aaKnown RBP5.05□□□□□ -1.6
LRRK2-204ENST00000430804 FAM89AQ96GI7 184 aa5.05□□□□□ -1.6
LRRK2-204ENST00000430804 FAM167AQ96KS9 214 aa5.05□□□□□ -1.6
LRRK2-204ENST00000430804 SPAG5Q96R06 1193 aa5.05□□□□□ -1.6
LRRK2-204ENST00000430804 DDX50Q9BQ39 737 aaKnown RBP5.05□□□□□ -1.6
LRRK2-204ENST00000430804 THUMPD2Q9BTF0 503 aaKnown RBP5.05□□□□□ -1.6
LRRK2-204ENST00000430804 NUP62CLQ9H1M0 184 aa5.05□□□□□ -1.6
LRRK2-204ENST00000430804 SUGCTQ9HAC7 445 aa5.05□□□□□ -1.6
LRRK2-204ENST00000430804 POLR3EQ9NVU0 708 aa5.05□□□□□ -1.6
LRRK2-204ENST00000430804 MSCO60682 206 aa5.05□□□□□ -1.6
LRRK2-204ENST00000430804 GADD45BO75293 160 aaPredicted RBP5.05□□□□□ -1.6
LRRK2-204ENST00000430804 CRCPO75575 148 aa5.05□□□□□ -1.6
LRRK2-204ENST00000430804 EZH2Q15910 746 aaKnown RBP5.05□□□□□ -1.6
LRRK2-204ENST00000430804 SRGAP1Q7Z6B7 1085 aa5.05□□□□□ -1.6
LRRK2-204ENST00000430804 SUGP1Q8IWZ8 645 aaKnown RBP5.05□□□□□ -1.6
LRRK2-204ENST00000430804 FNBP4Q8N3X1 1017 aaPredicted RBP5.05□□□□□ -1.6
LRRK2-204ENST00000430804 MIGA1Q8NAN2 632 aa5.05□□□□□ -1.6
LRRK2-204ENST00000430804 CACTINQ8WUQ7 758 aaKnown RBP5.05□□□□□ -1.6
LRRK2-204ENST00000430804 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.05□□□□□ -1.6
LRRK2-204ENST00000430804 INCENPQ9NQS7 918 aa5.05□□□□□ -1.6
LRRK2-204ENST00000430804 USP25Q9UHP3 1055 aa5.05□□□□□ -1.6
LRRK2-204ENST00000430804 CNOT7Q9UIV1 285 aaKnown RBP5.05□□□□□ -1.6
LRRK2-204ENST00000430804 CFAP43Q8NDM7 1665 aa5.05□□□□□ -1.6
LRRK2-204ENST00000430804 TMEM88BA6NKF7 163 aa5.04□□□□□ -1.6
LRRK2-204ENST00000430804 RAD51Q06609 339 aa5.04□□□□□ -1.6
LRRK2-204ENST00000430804 NFX1Q12986 1120 aaKnown RBP5.04□□□□□ -1.6
LRRK2-204ENST00000430804 SESTD1Q86VW0 696 aa5.04□□□□□ -1.6
LRRK2-204ENST00000430804 MICU3Q86XE3 530 aa5.04□□□□□ -1.6
LRRK2-204ENST00000430804 MAPKAPK5Q8IW41 473 aa5.04□□□□□ -1.6
LRRK2-204ENST00000430804 EFCAB13Q8IY85 973 aa5.04□□□□□ -1.6
LRRK2-204ENST00000430804 MMRN2Q9H8L6 949 aa5.04□□□□□ -1.6
LRRK2-204ENST00000430804 CARMIL3Q8ND23 1372 aa5.04□□□□□ -1.6
LRRK2-204ENST00000430804 FOSP01100 380 aaPredicted RBP5.04□□□□□ -1.6
LRRK2-204ENST00000430804 TMEM132BQ14DG7 1078 aa5.04□□□□□ -1.6
LRRK2-204ENST00000430804 LMBRD2Q68DH5 695 aaPredicted RBP5.04□□□□□ -1.6
LRRK2-204ENST00000430804 TADA2BQ86TJ2 420 aa5.04□□□□□ -1.6
LRRK2-204ENST00000430804 RAB11FIP4Q86YS3 637 aa5.04□□□□□ -1.6
LRRK2-204ENST00000430804 PRPF38AQ8NAV1 312 aaKnown RBP5.04□□□□□ -1.6
LRRK2-204ENST00000430804 PPP1R14CQ8TAE6 165 aa5.04□□□□□ -1.6
LRRK2-204ENST00000430804 TGFBRAP1Q8WUH2 860 aa5.04□□□□□ -1.6
LRRK2-204ENST00000430804 UCMAQ8WVF2 138 aa5.04□□□□□ -1.6
LRRK2-204ENST00000430804 GPR101Q96P66 508 aaPredicted RBP5.04□□□□□ -1.6
LRRK2-204ENST00000430804 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.04□□□□□ -1.6
LRRK2-204ENST00000430804 SH2B1Q9NRF2 756 aaPredicted RBP5.04□□□□□ -1.6
LRRK2-204ENST00000430804 ZHX2Q9Y6X8 837 aa5.04□□□□□ -1.6
LRRK2-204ENST00000430804 RNF123Q5XPI4 1314 aa5.04□□□□□ -1.6
LRRK2-204ENST00000430804 CHMP2AO43633 222 aa5.04□□□□□ -1.6
LRRK2-204ENST00000430804 MYZAPP0CAP1 466 aa5.04□□□□□ -1.6
LRRK2-204ENST00000430804 POLGP54098 1239 aaPredicted RBP5.04□□□□□ -1.6
LRRK2-204ENST00000430804 TMEM199Q8N511 208 aa5.04□□□□□ -1.6
LRRK2-204ENST00000430804 ALG1Q9BT22 464 aa5.04□□□□□ -1.6
LRRK2-204ENST00000430804 APOL6Q9BWW8 343 aa5.04□□□□□ -1.6
LRRK2-204ENST00000430804 SNX25Q9H3E2 840 aa5.04□□□□□ -1.6
LRRK2-204ENST00000430804 FPGT-TNNI3KV9GXZ4 949 aa5.04□□□□□ -1.6
LRRK2-204ENST00000430804 GAS7O60861 476 aa5.04□□□□□ -1.6
LRRK2-204ENST00000430804 ERLIN1O75477 346 aa5.04□□□□□ -1.6
LRRK2-204ENST00000430804 EEF2P13639 858 aaKnown RBP5.04□□□□□ -1.6
LRRK2-204ENST00000430804 PPP1R2P41236 205 aa5.04□□□□□ -1.6
LRRK2-204ENST00000430804 GCLCP48506 637 aaPredicted RBP5.04□□□□□ -1.6
LRRK2-204ENST00000430804 CFAP100Q494V2 611 aa5.04□□□□□ -1.6
LRRK2-204ENST00000430804 TAX1BP1Q86VP1 789 aa5.04□□□□□ -1.6
LRRK2-204ENST00000430804 FBXO11Q86XK2 927 aa5.04□□□□□ -1.6
LRRK2-204ENST00000430804 PALM2Q8IXS6 379 aa5.04□□□□□ -1.6
LRRK2-204ENST00000430804 MICALL2Q8IY33 904 aa5.04□□□□□ -1.6
LRRK2-204ENST00000430804 ZNF713Q8N859 430 aaPredicted RBP5.04□□□□□ -1.6
LRRK2-204ENST00000430804 ATP8A2Q9NTI2 1148 aa5.04□□□□□ -1.6
LRRK2-204ENST00000430804 PI4KBQ9UBF8 816 aa5.04□□□□□ -1.6
LRRK2-204ENST00000430804 USP17L15C9J2P7 530 aa5.04□□□□□ -1.6
LRRK2-204ENST00000430804 USP17L13C9JLJ4 530 aa5.04□□□□□ -1.6
LRRK2-204ENST00000430804 USP17L11C9JVI0 530 aa5.04□□□□□ -1.6
LRRK2-204ENST00000430804 USP17L18D6R9N7 530 aa5.04□□□□□ -1.6
LRRK2-204ENST00000430804 USP17L22D6RA61 530 aa5.04□□□□□ -1.6
LRRK2-204ENST00000430804 USP17L17D6RBQ6 530 aa5.04□□□□□ -1.6
LRRK2-204ENST00000430804 USP17L19D6RCP7 530 aa5.04□□□□□ -1.6
LRRK2-204ENST00000430804 USP17L20D6RJB6 530 aa5.04□□□□□ -1.6
LRRK2-204ENST00000430804 GMNNO75496 209 aa5.04□□□□□ -1.6
LRRK2-204ENST00000430804 PRR29P0C7W0 189 aa5.04□□□□□ -1.6
LRRK2-204ENST00000430804 ATP2A2P16615 1042 aaKnown RBP5.04□□□□□ -1.6
LRRK2-204ENST00000430804 STAT6P42226 847 aa5.04□□□□□ -1.6
LRRK2-204ENST00000430804 USP17L24Q0WX57 530 aa5.04□□□□□ -1.6
LRRK2-204ENST00000430804 ZNF174Q15697 407 aa5.04□□□□□ -1.6
LRRK2-204ENST00000430804 USH1GQ495M9 461 aa5.04□□□□□ -1.6
LRRK2-204ENST00000430804 SLC45A4Q5BKX6 768 aa5.04□□□□□ -1.6
LRRK2-204ENST00000430804 NECAB2Q7Z6G3 386 aa5.04□□□□□ -1.6
LRRK2-204ENST00000430804 DEFB132Q7Z7B7 95 aa5.04□□□□□ -1.6
LRRK2-204ENST00000430804 SLC7A3Q8WY07 619 aa5.04□□□□□ -1.6
LRRK2-204ENST00000430804 RNF208Q9H0X6 261 aa5.04□□□□□ -1.6
LRRK2-204ENST00000430804 WDR33Q9C0J8 1336 aaKnown RBP5.04□□□□□ -1.6
LRRK2-204ENST00000430804 ABCC1P33527 1531 aa5.04□□□□□ -1.6
LRRK2-204ENST00000430804 PLEKHG2Q9H7P9 1386 aa5.03□□□□□ -1.6
LRRK2-204ENST00000430804 EYA2O00167 538 aa5.03□□□□□ -1.6
LRRK2-204ENST00000430804 RNF113AO15541 343 aaKnown RBP5.03□□□□□ -1.6
LRRK2-204ENST00000430804 DSTYKQ6XUX3 929 aa5.03□□□□□ -1.6
LRRK2-204ENST00000430804 SEPT14Q6ZU15 432 aa5.03□□□□□ -1.6
LRRK2-204ENST00000430804 THNSL1Q8IYQ7 743 aa5.03□□□□□ -1.6
LRRK2-204ENST00000430804 NSUN7Q8NE18 718 aaKnown RBP5.03□□□□□ -1.6
LRRK2-204ENST00000430804 CFAP57Q96MR6 1250 aa5.03□□□□□ -1.6
LRRK2-204ENST00000430804 FAM204AQ9H8W3 233 aa5.03□□□□□ -1.6
LRRK2-204ENST00000430804 KANSL2Q9H9L4 492 aa5.03□□□□□ -1.6
LRRK2-204ENST00000430804 RPF1Q9H9Y2 349 aaKnown RBP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms