RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 ELP3Q9H9T3 547 aa12.95□□□□□ -0.34
CHD4-202ENST00000430771 INCENPQ9NQS7 918 aa12.95□□□□□ -0.34
CHD4-202ENST00000430771 CYP46A1Q9Y6A2 500 aa12.95□□□□□ -0.34
CHD4-202ENST00000430771 IGKV6D-41A0A0C4DH26 115 aa12.94□□□□□ -0.34
CHD4-202ENST00000430771 PTPRAP18433 802 aa12.94□□□□□ -0.34
CHD4-202ENST00000430771 RPS6KB1P23443 525 aa12.94□□□□□ -0.34
CHD4-202ENST00000430771 FGD1P98174 961 aa12.94□□□□□ -0.34
CHD4-202ENST00000430771 PPATQ06203 517 aa12.94□□□□□ -0.34
CHD4-202ENST00000430771 PPIL2Q13356 520 aa12.94□□□□□ -0.34
CHD4-202ENST00000430771 RABEP1Q15276 862 aa12.94□□□□□ -0.34
CHD4-202ENST00000430771 RUFY3Q7L099 469 aa12.94□□□□□ -0.34
CHD4-202ENST00000430771 IL27Q8NEV9 243 aa12.94□□□□□ -0.34
CHD4-202ENST00000430771 CEP95Q96GE4 821 aa12.94□□□□□ -0.34
CHD4-202ENST00000430771 ZSCAN10Q96SZ4 725 aaPredicted RBP12.94□□□□□ -0.34
CHD4-202ENST00000430771 ZSWIM5Q9P217 1185 aa12.94□□□□□ -0.34
CHD4-202ENST00000430771 SYNPO2Q9UMS6 1093 aa12.94□□□□□ -0.34
CHD4-202ENST00000430771 STX8Q9UNK0 236 aa12.94□□□□□ -0.34
CHD4-202ENST00000430771 IFIT3O14879 490 aaKnown RBP12.93□□□□□ -0.34
CHD4-202ENST00000430771 ZBTB48P10074 688 aaPredicted RBP12.93□□□□□ -0.34
CHD4-202ENST00000430771 GUCY1A2P33402 732 aa12.93□□□□□ -0.34
CHD4-202ENST00000430771 ANTXR2P58335 489 aa12.93□□□□□ -0.34
CHD4-202ENST00000430771 ATP2B2Q01814 1243 aa12.93□□□□□ -0.34
CHD4-202ENST00000430771 WTAPQ15007 396 aa12.93□□□□□ -0.34
CHD4-202ENST00000430771 SHROOM1Q2M3G4 852 aaPredicted RBP12.93□□□□□ -0.34
CHD4-202ENST00000430771 TMEM67Q5HYA8 995 aa12.93□□□□□ -0.34
CHD4-202ENST00000430771 IFIT1BQ5T764 474 aaKnown RBP12.93□□□□□ -0.34
CHD4-202ENST00000430771 RGMBQ6NW40 437 aa12.93□□□□□ -0.34
CHD4-202ENST00000430771 CYB5R4Q7L1T6 521 aa12.93□□□□□ -0.34
CHD4-202ENST00000430771 DGKHQ86XP1 1220 aa12.93□□□□□ -0.34
CHD4-202ENST00000430771 ZNF280CQ8ND82 737 aa12.93□□□□□ -0.34
CHD4-202ENST00000430771 OPTNQ96CV9 577 aa12.93□□□□□ -0.34
CHD4-202ENST00000430771 SLC10A4Q96EP9 437 aa12.93□□□□□ -0.34
CHD4-202ENST00000430771 OTUD5Q96G74 571 aa12.93□□□□□ -0.34
CHD4-202ENST00000430771 CLMNQ96JQ2 1002 aa12.93□□□□□ -0.34
CHD4-202ENST00000430771 TTC14Q96N46 770 aa12.93□□□□□ -0.34
CHD4-202ENST00000430771 ZKSCAN3Q9BRR0 538 aa12.93□□□□□ -0.34
CHD4-202ENST00000430771 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.93□□□□□ -0.34
CHD4-202ENST00000430771 ZSWIM6Q9HCJ5 1215 aa12.93□□□□□ -0.34
CHD4-202ENST00000430771 MTMR4Q9NYA4 1195 aa12.93□□□□□ -0.34
CHD4-202ENST00000430771 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.93□□□□□ -0.34
CHD4-202ENST00000430771 NYAP2Q9P242 653 aa12.93□□□□□ -0.34
CHD4-202ENST00000430771 SH2B2O14492 632 aaPredicted RBP12.92□□□□□ -0.34
CHD4-202ENST00000430771 NMT2O60551 498 aa12.92□□□□□ -0.34
CHD4-202ENST00000430771 TOP1P11387 765 aaKnown RBP12.92□□□□□ -0.34
CHD4-202ENST00000430771 EEF2P13639 858 aaKnown RBP12.92□□□□□ -0.34
CHD4-202ENST00000430771 USP14P54578 494 aa12.92□□□□□ -0.34
CHD4-202ENST00000430771 JAG1P78504 1218 aa12.92□□□□□ -0.34
CHD4-202ENST00000430771 PAXIP1Q6ZW49 1069 aaPredicted RBP12.92□□□□□ -0.34
CHD4-202ENST00000430771 RASAL3Q86YV0 1011 aa12.92□□□□□ -0.34
CHD4-202ENST00000430771 CLEC10AQ8IUN9 316 aa12.92□□□□□ -0.34
CHD4-202ENST00000430771 ENAHQ8N8S7 591 aaPredicted RBP12.92□□□□□ -0.34
CHD4-202ENST00000430771 WNK4Q96J92 1243 aa12.92□□□□□ -0.34
CHD4-202ENST00000430771 WDR18Q9BV38 432 aa12.92□□□□□ -0.34
CHD4-202ENST00000430771 UPF3BQ9BZI7 483 aaKnown RBP12.92□□□□□ -0.34
CHD4-202ENST00000430771 KAT14Q9H8E8 782 aa12.92□□□□□ -0.34
CHD4-202ENST00000430771 GOPCQ9HD26 462 aa12.92□□□□□ -0.34
CHD4-202ENST00000430771 IL17RBQ9NRM6 502 aa12.92□□□□□ -0.34
CHD4-202ENST00000430771 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.92□□□□□ -0.34
CHD4-202ENST00000430771 ZHX2Q9Y6X8 837 aa12.92□□□□□ -0.34
CHD4-202ENST00000430771 THSD7BQ9C0I4 1608 aa12.91□□□□□ -0.34
CHD4-202ENST00000430771 RASSF10A6NK89 507 aa12.91□□□□□ -0.34
CHD4-202ENST00000430771 USP17L10C9JJH3 530 aa12.91□□□□□ -0.34
CHD4-202ENST00000430771 SLC10A3P09131 477 aa12.91□□□□□ -0.34
CHD4-202ENST00000430771 LIFRP42702 1097 aa12.91□□□□□ -0.34
CHD4-202ENST00000430771 NOVP48745 357 aa12.91□□□□□ -0.34
CHD4-202ENST00000430771 ZNF157P51786 506 aaPredicted RBP12.91□□□□□ -0.34
CHD4-202ENST00000430771 EXOSC10Q01780 885 aaKnown RBP12.91□□□□□ -0.34
CHD4-202ENST00000430771 MTMR2Q13614 643 aa12.91□□□□□ -0.34
CHD4-202ENST00000430771 CHST3Q7LGC8 479 aa12.91□□□□□ -0.34
CHD4-202ENST00000430771 CCDC84Q86UT8 332 aaPredicted RBP12.91□□□□□ -0.34
CHD4-202ENST00000430771 TMTC2Q8N394 836 aa12.91□□□□□ -0.34
CHD4-202ENST00000430771 CCDC102AQ96A19 550 aa12.91□□□□□ -0.34
CHD4-202ENST00000430771 PDRG1Q9NUG6 133 aa12.91□□□□□ -0.34
CHD4-202ENST00000430771 CCDC69A6NI79 296 aa12.9□□□□□ -0.34
CHD4-202ENST00000430771 TRIM75PA6NK02 468 aa12.9□□□□□ -0.34
CHD4-202ENST00000430771 C19orf81C9J6K1 198 aa12.9□□□□□ -0.34
CHD4-202ENST00000430771 CXCL11O14625 94 aa12.9□□□□□ -0.34
CHD4-202ENST00000430771 ST18O60284 1047 aa12.9□□□□□ -0.34
CHD4-202ENST00000430771 ECE1P42892 770 aa12.9□□□□□ -0.34
CHD4-202ENST00000430771 C1QTNF8P60827 252 aa12.9□□□□□ -0.34
CHD4-202ENST00000430771 SNAPC2Q13487 334 aa12.9□□□□□ -0.34
CHD4-202ENST00000430771 ANKRD1Q15327 319 aa12.9□□□□□ -0.34
CHD4-202ENST00000430771 SEC23AQ15436 765 aa12.9□□□□□ -0.34
CHD4-202ENST00000430771 NFXL1Q6ZNB6 911 aa12.9□□□□□ -0.34
CHD4-202ENST00000430771 Q6ZUG5 572 aa12.9□□□□□ -0.34
CHD4-202ENST00000430771 LRRC47Q8N1G4 583 aaKnown RBP12.9□□□□□ -0.34
CHD4-202ENST00000430771 NKX2-3Q8TAU0 364 aa12.9□□□□□ -0.34
CHD4-202ENST00000430771 ANKS1AQ92625 1134 aa12.9□□□□□ -0.34
CHD4-202ENST00000430771 TCEANC2Q96MN5 208 aa12.9□□□□□ -0.34
CHD4-202ENST00000430771 LRRC2Q9BYS8 371 aa12.9□□□□□ -0.34
CHD4-202ENST00000430771 KIAA1683Q9H0B3 1180 aa12.9□□□□□ -0.34
CHD4-202ENST00000430771 LY9Q9HBG7 655 aa12.9□□□□□ -0.34
CHD4-202ENST00000430771 TMOD4Q9NZQ9 345 aa12.9□□□□□ -0.34
CHD4-202ENST00000430771 CLIP2Q9UDT6 1046 aa12.9□□□□□ -0.34
CHD4-202ENST00000430771 KCNH4Q9UQ05 1017 aa12.9□□□□□ -0.34
CHD4-202ENST00000430771 TMX2Q9Y320 296 aa12.9□□□□□ -0.34
CHD4-202ENST00000430771 AFG3L2Q9Y4W6 797 aa12.9□□□□□ -0.34
CHD4-202ENST00000430771 A0A0G2JLL6 359 aaPredicted RBP12.89□□□□□ -0.35
CHD4-202ENST00000430771 IRF6O14896 467 aa12.89□□□□□ -0.35
CHD4-202ENST00000430771 DDAH1O94760 285 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms