RNA–Protein interactions for RNA: ENST00000429544.6

MBD4-203, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD4, Length 2,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-203ENST00000429544 NRBP1Q9UHY1 535 aa18.66■□□□□ 0.58
MBD4-203ENST00000429544 FBXO2Q9UK22 296 aaPredicted RBP18.66■□□□□ 0.58
MBD4-203ENST00000429544 PYCARDQ9ULZ3 195 aa18.66■□□□□ 0.58
MBD4-203ENST00000429544 LRRC37AA6NMS7 1700 aa18.66■□□□□ 0.58
MBD4-203ENST00000429544 ANKRD31Q8N7Z5 1873 aa18.66■□□□□ 0.58
MBD4-203ENST00000429544 IL1R1P14778 569 aa18.65■□□□□ 0.58
MBD4-203ENST00000429544 HOXA10P31260 410 aaPredicted RBP18.65■□□□□ 0.58
MBD4-203ENST00000429544 RCSD1Q6JBY9 416 aa18.65■□□□□ 0.58
MBD4-203ENST00000429544 MAPKAPK5Q8IW41 473 aa18.65■□□□□ 0.58
MBD4-203ENST00000429544 AMOTL1Q8IY63 956 aa18.65■□□□□ 0.58
MBD4-203ENST00000429544 ROBO3Q96MS0 1386 aa18.65■□□□□ 0.58
MBD4-203ENST00000429544 SAP30BPQ9UHR5 308 aaKnown RBP18.65■□□□□ 0.58
MBD4-203ENST00000429544 KCNH3Q9ULD8 1083 aa18.65■□□□□ 0.58
MBD4-203ENST00000429544 R3HCC1Q9Y3T6 440 aaKnown RBP18.65■□□□□ 0.58
MBD4-203ENST00000429544 PROM2Q8N271 834 aa18.65■□□□□ 0.58
MBD4-203ENST00000429544 TBC1D16Q8TBP0 767 aa18.65■□□□□ 0.58
MBD4-203ENST00000429544 PTPREP23469 700 aa18.64■□□□□ 0.58
MBD4-203ENST00000429544 CDC25BP30305 580 aa18.64■□□□□ 0.58
MBD4-203ENST00000429544 BTDP43251 543 aa18.64■□□□□ 0.58
MBD4-203ENST00000429544 RBM6P78332 1123 aaKnown RBP18.64■□□□□ 0.58
MBD4-203ENST00000429544 PNOCQ13519 176 aa18.64■□□□□ 0.58
MBD4-203ENST00000429544 NOLC1Q14978 699 aaKnown RBP eCLIP18.64■□□□□ 0.58
MBD4-203ENST00000429544 CRAMP1Q96RY5 1269 aa18.64■□□□□ 0.58
MBD4-203ENST00000429544 MKNK2Q9HBH9 465 aa18.64■□□□□ 0.58
MBD4-203ENST00000429544 LTBP1Q14766 1721 aa18.64■□□□□ 0.57
MBD4-203ENST00000429544 C6orf229H3BNL8 230 aa18.64■□□□□ 0.57
MBD4-203ENST00000429544 EARS2Q5JPH6 523 aaKnown RBP18.64■□□□□ 0.57
MBD4-203ENST00000429544 ISM2Q6H9L7 571 aa18.64■□□□□ 0.57
MBD4-203ENST00000429544 KAT14Q9H8E8 782 aa18.64■□□□□ 0.57
MBD4-203ENST00000429544 PODXL2Q9NZ53 605 aa18.64■□□□□ 0.57
MBD4-203ENST00000429544 CEP131Q9UPN4 1083 aa18.64■□□□□ 0.57
MBD4-203ENST00000429544 LONRF3Q496Y0 759 aa18.63■□□□□ 0.57
MBD4-203ENST00000429544 SLC44A5Q8NCS7 719 aa18.63■□□□□ 0.57
MBD4-203ENST00000429544 IL17RBQ9NRM6 502 aa18.63■□□□□ 0.57
MBD4-203ENST00000429544 KRBA2Q6ZNG9 492 aa18.63■□□□□ 0.57
MBD4-203ENST00000429544 METTL16Q86W50 562 aaKnown RBP18.63■□□□□ 0.57
MBD4-203ENST00000429544 CNNM3Q8NE01 707 aa18.63■□□□□ 0.57
MBD4-203ENST00000429544 BPIFA3Q9BQP9 254 aa18.63■□□□□ 0.57
MBD4-203ENST00000429544 TUBE1Q9UJT0 475 aa18.63■□□□□ 0.57
MBD4-203ENST00000429544 DDX60LQ5H9U9 1706 aaKnown RBP18.62■□□□□ 0.57
MBD4-203ENST00000429544 PPEF1O14829 653 aaPredicted RBP18.62■□□□□ 0.57
MBD4-203ENST00000429544 MFSD14BQ5SR56 506 aa18.62■□□□□ 0.57
MBD4-203ENST00000429544 MRFAP1L1Q96HT8 127 aa18.62■□□□□ 0.57
MBD4-203ENST00000429544 BRMS1Q9HCU9 246 aa18.62■□□□□ 0.57
MBD4-203ENST00000429544 FAM13BQ9NYF5 915 aa18.62■□□□□ 0.57
MBD4-203ENST00000429544 USP17L3A6NCW0 530 aa18.62■□□□□ 0.57
MBD4-203ENST00000429544 USP17L4A6NCW7 530 aa18.62■□□□□ 0.57
MBD4-203ENST00000429544 TRIM75PA6NK02 468 aa18.62■□□□□ 0.57
MBD4-203ENST00000429544 PLCD1P51178 756 aa18.62■□□□□ 0.57
MBD4-203ENST00000429544 USP17L1Q7RTZ2 530 aa18.62■□□□□ 0.57
MBD4-203ENST00000429544 TEX11Q8IYF3 940 aa18.62■□□□□ 0.57
MBD4-203ENST00000429544 MYH1P12882 1939 aa18.62■□□□□ 0.57
MBD4-203ENST00000429544 KLRG2A4D1S0 409 aaPredicted RBP18.61■□□□□ 0.57
MBD4-203ENST00000429544 KIF5BP33176 963 aa18.61■□□□□ 0.57
MBD4-203ENST00000429544 NPY5RQ15761 445 aa18.61■□□□□ 0.57
MBD4-203ENST00000429544 ZNF827Q17R98 1081 aa18.61■□□□□ 0.57
MBD4-203ENST00000429544 NOM1Q5C9Z4 860 aaKnown RBP18.61■□□□□ 0.57
MBD4-203ENST00000429544 PNMA1Q8ND90 353 aa18.61■□□□□ 0.57
MBD4-203ENST00000429544 KIAA1524Q8TCG1 905 aa18.61■□□□□ 0.57
MBD4-203ENST00000429544 ANO8Q9HCE9 1232 aaPredicted RBP18.61■□□□□ 0.57
MBD4-203ENST00000429544 SRPRBQ9Y5M8 271 aaKnown RBP18.61■□□□□ 0.57
MBD4-203ENST00000429544 GPR75-ASB3A0A0A6YYF3 556 aa18.61■□□□□ 0.57
MBD4-203ENST00000429544 TSPY3P0CV98 308 aa18.61■□□□□ 0.57
MBD4-203ENST00000429544 TSPY8P0CW00 308 aa18.61■□□□□ 0.57
MBD4-203ENST00000429544 SCG2P13521 617 aa18.61■□□□□ 0.57
MBD4-203ENST00000429544 LRMPQ12912 555 aa18.61■□□□□ 0.57
MBD4-203ENST00000429544 CCDC144BQ3MJ40 725 aa18.61■□□□□ 0.57
MBD4-203ENST00000429544 DGKHQ86XP1 1220 aa18.61■□□□□ 0.57
MBD4-203ENST00000429544 DNTTIP2Q5QJE6 756 aaKnown RBP18.6■□□□□ 0.57
MBD4-203ENST00000429544 ZNF444Q8N0Y2 327 aaPredicted RBP18.6■□□□□ 0.57
MBD4-203ENST00000429544 TNFRSF25Q93038 417 aa18.6■□□□□ 0.57
MBD4-203ENST00000429544 SPTLC3Q9NUV7 552 aa18.6■□□□□ 0.57
MBD4-203ENST00000429544 FOXN1O15353 648 aa18.6■□□□□ 0.57
MBD4-203ENST00000429544 PFKFB3Q16875 520 aaPredicted RBP18.6■□□□□ 0.57
MBD4-203ENST00000429544 CERS3Q8IU89 383 aa18.6■□□□□ 0.57
MBD4-203ENST00000429544 ZNF579Q8NAF0 562 aaKnown RBP18.6■□□□□ 0.57
MBD4-203ENST00000429544 CSRNP2Q9H175 543 aa18.6■□□□□ 0.57
MBD4-203ENST00000429544 WNT7AO00755 349 aa18.59■□□□□ 0.57
MBD4-203ENST00000429544 RIMBP2O15034 1052 aa18.59■□□□□ 0.57
MBD4-203ENST00000429544 POLR2DO15514 142 aaKnown RBP18.59■□□□□ 0.57
MBD4-203ENST00000429544 VEGFAP15692 232 aaPredicted RBP18.59■□□□□ 0.57
MBD4-203ENST00000429544 RASA1P20936 1047 aa18.59■□□□□ 0.57
MBD4-203ENST00000429544 ANKS1AQ92625 1134 aa18.59■□□□□ 0.57
MBD4-203ENST00000429544 NT5C2P49902 561 aa18.59■□□□□ 0.57
MBD4-203ENST00000429544 NLRP5P59047 1200 aa18.59■□□□□ 0.57
MBD4-203ENST00000429544 SP8Q8IXZ3 490 aa18.59■□□□□ 0.57
MBD4-203ENST00000429544 STAG2Q8N3U4 1231 aa18.59■□□□□ 0.57
MBD4-203ENST00000429544 TBC1D22AQ8WUA7 517 aa18.59■□□□□ 0.57
MBD4-203ENST00000429544 SERTAD1Q9UHV2 236 aa18.59■□□□□ 0.57
MBD4-203ENST00000429544 MTMR7Q9Y216 660 aa18.59■□□□□ 0.57
MBD4-203ENST00000429544 FLT1P17948 1338 aa18.58■□□□□ 0.57
MBD4-203ENST00000429544 FOCADQ5VW36 1801 aa18.58■□□□□ 0.57
MBD4-203ENST00000429544 PLCG2P16885 1265 aa18.58■□□□□ 0.57
MBD4-203ENST00000429544 GRM4Q14833 912 aa18.58■□□□□ 0.57
MBD4-203ENST00000429544 CCDC178Q5BJE1 867 aa18.58■□□□□ 0.57
MBD4-203ENST00000429544 TMC4Q7Z404 712 aa18.58■□□□□ 0.57
MBD4-203ENST00000429544 NRXN2Q9P2S2 1712 aa18.58■□□□□ 0.57
MBD4-203ENST00000429544 SNED1Q8TER0 1413 aa18.58■□□□□ 0.56
MBD4-203ENST00000429544 SMTNL1A8MU46 457 aa18.58■□□□□ 0.56
MBD4-203ENST00000429544 RHBDL3P58872 404 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms