RNA–Protein interactions for RNA: ENST00000427563.1

COL9A2-204, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-204ENST00000427563 PDE1AP54750 535 aa23.04■■□□□ 1.28
COL9A2-204ENST00000427563 PRKCZQ05513 592 aa23.04■■□□□ 1.28
COL9A2-204ENST00000427563 ZYXQ15942 572 aaKnown RBP23.04■■□□□ 1.28
COL9A2-204ENST00000427563 FAM110CQ1W6H9 321 aa23.04■■□□□ 1.28
COL9A2-204ENST00000427563 USP17L2Q6R6M4 530 aa23.04■■□□□ 1.28
COL9A2-204ENST00000427563 SIAH1Q8IUQ4 282 aa23.04■■□□□ 1.28
COL9A2-204ENST00000427563 MKI67P46013 3256 aaKnown RBP23.03■■□□□ 1.28
COL9A2-204ENST00000427563 ZFYP08048 801 aaPredicted RBP23.03■■□□□ 1.28
COL9A2-204ENST00000427563 CDK8P49336 464 aa23.03■■□□□ 1.28
COL9A2-204ENST00000427563 PRMT2P55345 433 aa23.03■■□□□ 1.28
COL9A2-204ENST00000427563 FCGRTP55899 365 aa23.03■■□□□ 1.28
COL9A2-204ENST00000427563 PABPC4Q13310 644 aaKnown RBP eCLIP23.03■■□□□ 1.28
COL9A2-204ENST00000427563 C16orf86Q6ZW13 317 aa23.03■■□□□ 1.28
COL9A2-204ENST00000427563 CLEC10AQ8IUN9 316 aa23.03■■□□□ 1.28
COL9A2-204ENST00000427563 LNPKQ9C0E8 428 aa23.03■■□□□ 1.28
COL9A2-204ENST00000427563 KIAA1683Q9H0B3 1180 aa23.03■■□□□ 1.28
COL9A2-204ENST00000427563 TXNRD2Q9NNW7 524 aa23.03■■□□□ 1.28
COL9A2-204ENST00000427563 CABP5Q9NP86 173 aa23.03■■□□□ 1.28
COL9A2-204ENST00000427563 SWAP70Q9UH65 585 aa23.03■■□□□ 1.28
COL9A2-204ENST00000427563 MYPNQ86TC9 1320 aa23.03■■□□□ 1.28
COL9A2-204ENST00000427563 RLFQ13129 1914 aa23.02■■□□□ 1.28
COL9A2-204ENST00000427563 SLC9C1Q4G0N8 1177 aa23.02■■□□□ 1.28
COL9A2-204ENST00000427563 MORF4L1Q9UBU8 362 aa23.02■■□□□ 1.28
COL9A2-204ENST00000427563 GCLCP48506 637 aaPredicted RBP23.01■■□□□ 1.27
COL9A2-204ENST00000427563 HERVK_113P62684 666 aa23.01■■□□□ 1.27
COL9A2-204ENST00000427563 SBK1Q52WX2 424 aa23.01■■□□□ 1.27
COL9A2-204ENST00000427563 KIAA1755Q5JYT7 1200 aa23.01■■□□□ 1.27
COL9A2-204ENST00000427563 ZMYM1Q5SVZ6 1142 aa23.01■■□□□ 1.27
COL9A2-204ENST00000427563 FSD1Q9BTV5 496 aa23.01■■□□□ 1.27
COL9A2-204ENST00000427563 MPHOSPH10O00566 681 aaKnown RBP23■■□□□ 1.27
COL9A2-204ENST00000427563 FOXP2O15409 715 aa23■■□□□ 1.27
COL9A2-204ENST00000427563 VCAM1P19320 739 aa23■■□□□ 1.27
COL9A2-204ENST00000427563 IRX3P78415 501 aaPredicted RBP23■■□□□ 1.27
COL9A2-204ENST00000427563 B4GALNT3Q6L9W6 998 aa23■■□□□ 1.27
COL9A2-204ENST00000427563 FEZ1Q99689 392 aa23■■□□□ 1.27
COL9A2-204ENST00000427563 RWDD1Q9H446 243 aaPredicted RBP23■■□□□ 1.27
COL9A2-204ENST00000427563 RBPJLQ9UBG7 517 aa23■■□□□ 1.27
COL9A2-204ENST00000427563 TAOK2Q9UL54 1235 aa23■■□□□ 1.27
COL9A2-204ENST00000427563 PARP14Q460N5 1801 aa22.99■■□□□ 1.27
COL9A2-204ENST00000427563 HOXD10P28358 340 aa22.99■■□□□ 1.27
COL9A2-204ENST00000427563 GIMAP6Q6P9H5 292 aa22.99■■□□□ 1.27
COL9A2-204ENST00000427563 TMEM179Q6ZVK1 233 aa22.99■■□□□ 1.27
COL9A2-204ENST00000427563 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.99■■□□□ 1.27
COL9A2-204ENST00000427563 ARPP21Q9UBL0 812 aaPredicted RBP22.99■■□□□ 1.27
COL9A2-204ENST00000427563 ROBO3Q96MS0 1386 aa22.99■■□□□ 1.27
COL9A2-204ENST00000427563 MYCP01106 439 aaPredicted RBP22.98■■□□□ 1.27
COL9A2-204ENST00000427563 FLT3LGP49771 235 aa22.98■■□□□ 1.27
COL9A2-204ENST00000427563 IRX6P78412 446 aaPredicted RBP22.98■■□□□ 1.27
COL9A2-204ENST00000427563 MTFR1Q15390 333 aa22.98■■□□□ 1.27
COL9A2-204ENST00000427563 Q3C1V9 767 aa22.98■■□□□ 1.27
COL9A2-204ENST00000427563 CCDC129Q6ZRS4 1044 aa22.98■■□□□ 1.27
COL9A2-204ENST00000427563 TNPO2O14787 897 aaKnown RBP22.97■■□□□ 1.27
COL9A2-204ENST00000427563 CNMDO75829 334 aa22.97■■□□□ 1.27
COL9A2-204ENST00000427563 EN2P19622 333 aaPredicted RBP22.97■■□□□ 1.27
COL9A2-204ENST00000427563 GRK4P32298 578 aa22.97■■□□□ 1.27
COL9A2-204ENST00000427563 USP14P54578 494 aa22.97■■□□□ 1.27
COL9A2-204ENST00000427563 NUCB1Q02818 461 aa22.97■■□□□ 1.27
COL9A2-204ENST00000427563 CATSPERGQ6ZRH7 1159 aa22.97■■□□□ 1.27
COL9A2-204ENST00000427563 RAET1EQ8TD07 263 aa22.97■■□□□ 1.27
COL9A2-204ENST00000427563 ZBTB47Q9UFB7 747 aaPredicted RBP22.97■■□□□ 1.27
COL9A2-204ENST00000427563 USP17L15C9J2P7 530 aa22.96■■□□□ 1.27
COL9A2-204ENST00000427563 PATL2C9JE40 543 aaKnown RBP22.96■■□□□ 1.27
COL9A2-204ENST00000427563 USP17L13C9JLJ4 530 aa22.96■■□□□ 1.27
COL9A2-204ENST00000427563 USP17L11C9JVI0 530 aa22.96■■□□□ 1.27
COL9A2-204ENST00000427563 USP17L18D6R9N7 530 aa22.96■■□□□ 1.27
COL9A2-204ENST00000427563 USP17L22D6RA61 530 aa22.96■■□□□ 1.27
COL9A2-204ENST00000427563 USP17L17D6RBQ6 530 aa22.96■■□□□ 1.27
COL9A2-204ENST00000427563 USP17L19D6RCP7 530 aa22.96■■□□□ 1.27
COL9A2-204ENST00000427563 USP17L20D6RJB6 530 aa22.96■■□□□ 1.27
COL9A2-204ENST00000427563 RASA1P20936 1047 aa22.96■■□□□ 1.27
COL9A2-204ENST00000427563 USP17L24Q0WX57 530 aa22.96■■□□□ 1.27
COL9A2-204ENST00000427563 NBPF11Q86T75 865 aa22.96■■□□□ 1.27
COL9A2-204ENST00000427563 CHD1LQ86WJ1 897 aa22.96■■□□□ 1.27
COL9A2-204ENST00000427563 IFNL3Q8IZI9 196 aa22.96■■□□□ 1.27
COL9A2-204ENST00000427563 STK11IPQ8N1F8 1099 aa22.96■■□□□ 1.27
COL9A2-204ENST00000427563 EVI5LQ96CN4 794 aa22.96■■□□□ 1.27
COL9A2-204ENST00000427563 DDRGK1Q96HY6 314 aa22.96■■□□□ 1.27
COL9A2-204ENST00000427563 CCDC17Q96LX7 622 aa22.96■■□□□ 1.27
COL9A2-204ENST00000427563 RPAP3Q9H6T3 665 aaPredicted RBP22.96■■□□□ 1.27
COL9A2-204ENST00000427563 GJD2Q9UKL4 321 aa22.96■■□□□ 1.27
COL9A2-204ENST00000427563 A0A0G2JMZ2 1700 aa22.96■■□□□ 1.27
COL9A2-204ENST00000427563 MINDY4BA8MYZ0 360 aa22.95■■□□□ 1.26
COL9A2-204ENST00000427563 GNAT2P19087 354 aa22.95■■□□□ 1.26
COL9A2-204ENST00000427563 PLEKHM2Q8IWE5 1019 aa22.95■■□□□ 1.26
COL9A2-204ENST00000427563 AMOTL1Q8IY63 956 aa22.95■■□□□ 1.26
COL9A2-204ENST00000427563 ELNP15502 786 aa22.94■■□□□ 1.26
COL9A2-204ENST00000427563 ICA1Q05084 483 aa22.94■■□□□ 1.26
COL9A2-204ENST00000427563 IRF5Q13568 498 aa22.94■■□□□ 1.26
COL9A2-204ENST00000427563 LRRFIP1Q32MZ4 808 aaKnown RBP22.94■■□□□ 1.26
COL9A2-204ENST00000427563 PORCNQ9H237 461 aa22.94■■□□□ 1.26
COL9A2-204ENST00000427563 TMX2Q9Y320 296 aa22.94■■□□□ 1.26
COL9A2-204ENST00000427563 SPDYE16A6NNV3 312 aaPredicted RBP22.93■■□□□ 1.26
COL9A2-204ENST00000427563 ERVK-9P63128 1117 aa22.93■■□□□ 1.26
COL9A2-204ENST00000427563 ERVK-24P63145 666 aa22.93■■□□□ 1.26
COL9A2-204ENST00000427563 GPRC5AQ8NFJ5 357 aa22.93■■□□□ 1.26
COL9A2-204ENST00000427563 PDE4DIPQ5VU43 2346 aa22.93■■□□□ 1.26
COL9A2-204ENST00000427563 ADCY3O60266 1144 aa22.92■■□□□ 1.26
COL9A2-204ENST00000427563 EEF2P13639 858 aaKnown RBP22.92■■□□□ 1.26
COL9A2-204ENST00000427563 TDO2P48775 406 aa22.92■■□□□ 1.26
COL9A2-204ENST00000427563 VPS53Q5VIR6 699 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms