RNA–Protein interactions for RNA: ENST00000427231.6

NEB-209, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-209ENST00000427231 IL17RAQ96F46 866 aa2.81□□□□□ -1.96
NEB-209ENST00000427231 TACC1O75410 805 aa2.81□□□□□ -1.96
NEB-209ENST00000427231 CARD6Q9BX69 1037 aa2.81□□□□□ -1.96
NEB-209ENST00000427231 EPS15L1Q9UBC2 864 aa2.81□□□□□ -1.96
NEB-209ENST00000427231 PLEKHG3A1L390 1219 aa2.81□□□□□ -1.96
NEB-209ENST00000427231 RASEFQ8IZ41 740 aa2.81□□□□□ -1.96
NEB-209ENST00000427231 ZNF579Q8NAF0 562 aaKnown RBP2.81□□□□□ -1.96
NEB-209ENST00000427231 ZNF330Q9Y3S2 320 aaPredicted RBP2.81□□□□□ -1.96
NEB-209ENST00000427231 PEG3Q9GZU2 1588 aa2.81□□□□□ -1.96
NEB-209ENST00000427231 PIK3R4Q99570 1358 aa2.81□□□□□ -1.96
NEB-209ENST00000427231 PRKG1Q13976 671 aa2.81□□□□□ -1.96
NEB-209ENST00000427231 NAA16Q6N069 864 aaPredicted RBP2.81□□□□□ -1.96
NEB-209ENST00000427231 NEK10Q6ZWH5 1172 aa2.81□□□□□ -1.96
NEB-209ENST00000427231 HS2ST1Q7LGA3 356 aa2.81□□□□□ -1.96
NEB-209ENST00000427231 FAM9CQ8IZT9 166 aa2.81□□□□□ -1.96
NEB-209ENST00000427231 SUPT20HQ8NEM7 779 aa2.81□□□□□ -1.96
NEB-209ENST00000427231 TTLL13PA6NNM8 815 aa2.81□□□□□ -1.96
NEB-209ENST00000427231 SURF6O75683 361 aaKnown RBP2.81□□□□□ -1.96
NEB-209ENST00000427231 ZMYND10O75800 440 aa2.81□□□□□ -1.96
NEB-209ENST00000427231 PPARGP37231 505 aaPredicted RBP2.81□□□□□ -1.96
NEB-209ENST00000427231 LRMPQ12912 555 aa2.81□□□□□ -1.96
NEB-209ENST00000427231 PCBP1Q15365 356 aaKnown RBP eCLIP2.81□□□□□ -1.96
NEB-209ENST00000427231 NUGGCQ68CJ6 796 aa2.81□□□□□ -1.96
NEB-209ENST00000427231 PHLDB2Q86SQ0 1253 aa2.81□□□□□ -1.96
NEB-209ENST00000427231 BEGAINQ9BUH8 593 aa2.81□□□□□ -1.96
NEB-209ENST00000427231 HHATLQ9HCP6 504 aa2.81□□□□□ -1.96
NEB-209ENST00000427231 PDHA1P08559 390 aa2.81□□□□□ -1.96
NEB-209ENST00000427231 EIF5P55010 431 aaKnown RBP2.81□□□□□ -1.96
NEB-209ENST00000427231 AOC3Q16853 763 aa2.81□□□□□ -1.96
NEB-209ENST00000427231 CHCHD4Q8N4Q1 142 aa2.81□□□□□ -1.96
NEB-209ENST00000427231 ALDH8A1Q9H2A2 487 aaPredicted RBP2.81□□□□□ -1.96
NEB-209ENST00000427231 SERPINC1P01008 464 aa2.8□□□□□ -1.96
NEB-209ENST00000427231 TOP1P11387 765 aaKnown RBP2.8□□□□□ -1.96
NEB-209ENST00000427231 UBA7P41226 1012 aa2.8□□□□□ -1.96
NEB-209ENST00000427231 KIF6Q6ZMV9 814 aa2.8□□□□□ -1.96
NEB-209ENST00000427231 DHX32Q7L7V1 743 aaKnown RBP2.8□□□□□ -1.96
NEB-209ENST00000427231 HVCN1Q96D96 273 aa2.8□□□□□ -1.96
NEB-209ENST00000427231 NDE1Q9NXR1 346 aa2.8□□□□□ -1.96
NEB-209ENST00000427231 MTRF1LQ9UGC7 380 aaKnown RBP2.8□□□□□ -1.96
NEB-209ENST00000427231 PSMD6Q15008 389 aa2.8□□□□□ -1.96
NEB-209ENST00000427231 AKAP4Q5JQC9 854 aa2.8□□□□□ -1.96
NEB-209ENST00000427231 PDZD4Q76G19 769 aaPredicted RBP2.8□□□□□ -1.96
NEB-209ENST00000427231 GSDMBQ8TAX9 411 aa2.8□□□□□ -1.96
NEB-209ENST00000427231 CDK19Q9BWU1 502 aa2.8□□□□□ -1.96
NEB-209ENST00000427231 AATKQ6ZMQ8 1374 aa2.8□□□□□ -1.96
NEB-209ENST00000427231 ERICH3Q5RHP9 1530 aa2.8□□□□□ -1.96
NEB-209ENST00000427231 CCT2P78371 535 aaKnown RBP2.8□□□□□ -1.96
NEB-209ENST00000427231 TTC30AQ86WT1 665 aa2.8□□□□□ -1.96
NEB-209ENST00000427231 ESR2Q92731 530 aa2.8□□□□□ -1.96
NEB-209ENST00000427231 NACA2Q9H009 215 aa2.8□□□□□ -1.96
NEB-209ENST00000427231 TEKT2Q9UIF3 430 aa2.8□□□□□ -1.96
NEB-209ENST00000427231 CTAGE15A4D2H0 777 aa2.8□□□□□ -1.96
NEB-209ENST00000427231 PODXLO00592 558 aa2.8□□□□□ -1.96
NEB-209ENST00000427231 DDHD2O94830 711 aa2.8□□□□□ -1.96
NEB-209ENST00000427231 CTAGE8P0CG41 777 aa2.8□□□□□ -1.96
NEB-209ENST00000427231 ZNF280DQ6N043 979 aa2.8□□□□□ -1.96
NEB-209ENST00000427231 CTAGE6Q86UF2 777 aa2.8□□□□□ -1.96
NEB-209ENST00000427231 KSR1Q8IVT5 923 aa2.8□□□□□ -1.96
NEB-209ENST00000427231 CTAGE4Q8IX94 777 aa2.8□□□□□ -1.96
NEB-209ENST00000427231 RPGRQ92834 1020 aaKnown RBP2.8□□□□□ -1.96
NEB-209ENST00000427231 DACT3Q96B18 629 aaPredicted RBP2.8□□□□□ -1.96
NEB-209ENST00000427231 ARHGAP6O43182 974 aa2.8□□□□□ -1.96
NEB-209ENST00000427231 BAG6P46379 1132 aa2.8□□□□□ -1.96
NEB-209ENST00000427231 EXOSC9Q06265 439 aaKnown RBP2.8□□□□□ -1.96
NEB-209ENST00000427231 SLC4A8Q2Y0W8 1093 aa2.8□□□□□ -1.96
NEB-209ENST00000427231 CNBD1Q8NA66 436 aa2.8□□□□□ -1.96
NEB-209ENST00000427231 FBXO18Q8NFZ0 1043 aa2.8□□□□□ -1.96
NEB-209ENST00000427231 CLIC6Q96NY7 704 aa2.8□□□□□ -1.96
NEB-209ENST00000427231 POTEB3A0JP26 581 aa2.8□□□□□ -1.96
NEB-209ENST00000427231 E7ENQ6 273 aa2.8□□□□□ -1.96
NEB-209ENST00000427231 FOSL2P15408 326 aa2.8□□□□□ -1.96
NEB-209ENST00000427231 POTEBQ6S5H4 581 aa2.8□□□□□ -1.96
NEB-209ENST00000427231 SMARCC2Q8TAQ2 1214 aa2.8□□□□□ -1.96
NEB-209ENST00000427231 CALML4Q96GE6 196 aa2.8□□□□□ -1.96
NEB-209ENST00000427231 TRIM6Q9C030 488 aaPredicted RBP2.8□□□□□ -1.96
NEB-209ENST00000427231 NDUFA13Q9P0J0 144 aa2.8□□□□□ -1.96
NEB-209ENST00000427231 PHLDB3Q6NSJ2 640 aa2.8□□□□□ -1.96
NEB-209ENST00000427231 PTF1AQ7RTS3 328 aa2.8□□□□□ -1.96
NEB-209ENST00000427231 ZNF274Q96GC6 653 aaPredicted RBP2.8□□□□□ -1.96
NEB-209ENST00000427231 C8orf4Q9NR00 106 aa2.8□□□□□ -1.96
NEB-209ENST00000427231 A0A087WUV0 522 aaPredicted RBP2.8□□□□□ -1.96
NEB-209ENST00000427231 EIF2S1P05198 315 aaKnown RBP2.8□□□□□ -1.96
NEB-209ENST00000427231 RNASE9P60153 205 aaKnown RBP2.8□□□□□ -1.96
NEB-209ENST00000427231 STX1AQ16623 288 aa2.8□□□□□ -1.96
NEB-209ENST00000427231 CFAP221Q4G0U5 840 aa2.8□□□□□ -1.96
NEB-209ENST00000427231 MCMDC2Q4G0Z9 681 aa2.8□□□□□ -1.96
NEB-209ENST00000427231 MAST3O60307 1309 aa2.8□□□□□ -1.96
NEB-209ENST00000427231 Q9H521 79 aa2.8□□□□□ -1.96
NEB-209ENST00000427231 KIAA1586Q9HCI6 787 aa2.8□□□□□ -1.96
NEB-209ENST00000427231 ZNF215Q9UL58 517 aaPredicted RBP2.8□□□□□ -1.96
NEB-209ENST00000427231 PCDHGA3Q9Y5H0 932 aa2.8□□□□□ -1.96
NEB-209ENST00000427231 OPLAHO14841 1288 aa2.8□□□□□ -1.96
NEB-209ENST00000427231 MX1P20591 662 aa2.8□□□□□ -1.96
NEB-209ENST00000427231 RAB3GAP1Q15042 981 aa2.8□□□□□ -1.96
NEB-209ENST00000427231 TTC6Q86TZ1 520 aa2.8□□□□□ -1.96
NEB-209ENST00000427231 GSDMAQ96QA5 445 aa2.8□□□□□ -1.96
NEB-209ENST00000427231 DSCC1Q9BVC3 393 aa2.8□□□□□ -1.96
NEB-209ENST00000427231 TRAIPQ9BWF2 469 aa2.8□□□□□ -1.96
NEB-209ENST00000427231 NUP62CLQ9H1M0 184 aa2.8□□□□□ -1.96
NEB-209ENST00000427231 AP3M1Q9Y2T2 418 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms