RNA–Protein interactions for RNA: ENST00000427183.6

HDLBP-214, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2 BASIC

Gene HDLBP, Length 6,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-214ENST00000427183 HMGB2P26583 209 aaKnown RBP13.89□□□□□ -0.19
HDLBP-214ENST00000427183 SMTNP53814 917 aa13.89□□□□□ -0.19
HDLBP-214ENST00000427183 ARHGAP44Q17R89 818 aa13.89□□□□□ -0.19
HDLBP-214ENST00000427183 TTC19Q6DKK2 380 aaPredicted RBP13.89□□□□□ -0.19
HDLBP-214ENST00000427183 NCAPH2Q6IBW4 605 aa13.89□□□□□ -0.19
HDLBP-214ENST00000427183 MAGI2Q86UL8 1455 aa13.89□□□□□ -0.19
HDLBP-214ENST00000427183 DCLK2Q8N568 766 aa13.89□□□□□ -0.19
HDLBP-214ENST00000427183 NLRP3Q96P20 1036 aa13.89□□□□□ -0.19
HDLBP-214ENST00000427183 CD19P15391 556 aa13.89□□□□□ -0.19
HDLBP-214ENST00000427183 ATP6V1AP38606 617 aa13.89□□□□□ -0.19
HDLBP-214ENST00000427183 TFCP2Q12800 502 aa13.89□□□□□ -0.19
HDLBP-214ENST00000427183 TRIM14Q14142 442 aa13.89□□□□□ -0.19
HDLBP-214ENST00000427183 ZSCAN26Q16670 478 aa13.89□□□□□ -0.19
HDLBP-214ENST00000427183 PEX26Q7Z412 305 aa13.89□□□□□ -0.19
HDLBP-214ENST00000427183 PLCB1Q9NQ66 1216 aa13.89□□□□□ -0.19
HDLBP-214ENST00000427183 BIN2Q9UBW5 565 aaPredicted RBP13.89□□□□□ -0.19
HDLBP-214ENST00000427183 KCNH3Q9ULD8 1083 aa13.89□□□□□ -0.19
HDLBP-214ENST00000427183 RGS16O15492 202 aaPredicted RBP13.89□□□□□ -0.19
HDLBP-214ENST00000427183 IL15P40933 162 aaPredicted RBP13.89□□□□□ -0.19
HDLBP-214ENST00000427183 STRN3Q13033 797 aa13.89□□□□□ -0.19
HDLBP-214ENST00000427183 DBN1Q16643 649 aa13.89□□□□□ -0.19
HDLBP-214ENST00000427183 LONRF2Q1L5Z9 754 aa13.89□□□□□ -0.19
HDLBP-214ENST00000427183 GABPB2Q8TAK5 448 aaPredicted RBP13.89□□□□□ -0.19
HDLBP-214ENST00000427183 TROVE2P10155 538 aaKnown RBP eCLIP13.89□□□□□ -0.19
HDLBP-214ENST00000427183 SAT1P21673 171 aa13.89□□□□□ -0.19
HDLBP-214ENST00000427183 VPS41P49754 854 aa13.89□□□□□ -0.19
HDLBP-214ENST00000427183 LIG3P49916 1009 aa13.89□□□□□ -0.19
HDLBP-214ENST00000427183 ATP8B2P98198 1209 aa13.89□□□□□ -0.19
HDLBP-214ENST00000427183 PAK1Q13153 545 aa13.89□□□□□ -0.19
HDLBP-214ENST00000427183 RPS6KA1Q15418 735 aa13.89□□□□□ -0.19
HDLBP-214ENST00000427183 CCDC125Q86Z20 511 aa13.89□□□□□ -0.19
HDLBP-214ENST00000427183 RPSAP08865 295 aaKnown RBP13.88□□□□□ -0.19
HDLBP-214ENST00000427183 RASIP1Q5U651 963 aa13.88□□□□□ -0.19
HDLBP-214ENST00000427183 CBX8Q9HC52 389 aa13.88□□□□□ -0.19
HDLBP-214ENST00000427183 MYOM2P54296 1465 aa13.88□□□□□ -0.19
HDLBP-214ENST00000427183 CLTAP09496 248 aa13.88□□□□□ -0.19
HDLBP-214ENST00000427183 PLCD1P51178 756 aa13.88□□□□□ -0.19
HDLBP-214ENST00000427183 PPFIA1Q13136 1202 aa13.88□□□□□ -0.19
HDLBP-214ENST00000427183 OTUD7BQ6GQQ9 843 aa13.88□□□□□ -0.19
HDLBP-214ENST00000427183 TYW1BQ6NUM6 668 aa13.88□□□□□ -0.19
HDLBP-214ENST00000427183 PALM2Q8IXS6 379 aa13.88□□□□□ -0.19
HDLBP-214ENST00000427183 CFAP61Q8NHU2 1237 aa13.88□□□□□ -0.19
HDLBP-214ENST00000427183 STAMQ92783 540 aa13.88□□□□□ -0.19
HDLBP-214ENST00000427183 B4E1Z4 1266 aa13.88□□□□□ -0.19
HDLBP-214ENST00000427183 PFDN1O60925 122 aa13.88□□□□□ -0.19
HDLBP-214ENST00000427183 SERPINB6P35237 376 aa13.88□□□□□ -0.19
HDLBP-214ENST00000427183 CCDC13Q8IYE1 715 aa13.88□□□□□ -0.19
HDLBP-214ENST00000427183 TNNQ9UQP3 1299 aa13.88□□□□□ -0.19
HDLBP-214ENST00000427183 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.88□□□□□ -0.19
HDLBP-214ENST00000427183 POGZQ7Z3K3 1410 aa13.88□□□□□ -0.19
HDLBP-214ENST00000427183 SPDYE16A6NNV3 312 aaPredicted RBP13.88□□□□□ -0.19
HDLBP-214ENST00000427183 CTNNA1P35221 906 aaKnown RBP13.88□□□□□ -0.19
HDLBP-214ENST00000427183 ZNF75DP51815 510 aa13.88□□□□□ -0.19
HDLBP-214ENST00000427183 ZYXQ15942 572 aaKnown RBP13.88□□□□□ -0.19
HDLBP-214ENST00000427183 SPDYE2Q495Y8 402 aa13.88□□□□□ -0.19
HDLBP-214ENST00000427183 C8orf34Q49A92 452 aa13.88□□□□□ -0.19
HDLBP-214ENST00000427183 CFAP221Q4G0U5 840 aa13.88□□□□□ -0.19
HDLBP-214ENST00000427183 ANKRD44Q8N8A2 993 aa13.88□□□□□ -0.19
HDLBP-214ENST00000427183 NSFL1CQ9UNZ2 370 aaKnown RBP13.88□□□□□ -0.19
HDLBP-214ENST00000427183 HIP1RO75146 1068 aa13.88□□□□□ -0.19
HDLBP-214ENST00000427183 KLHL30Q0D2K2 578 aa13.88□□□□□ -0.19
HDLBP-214ENST00000427183 IDI1Q13907 227 aa13.88□□□□□ -0.19
HDLBP-214ENST00000427183 PPP2R5AQ15172 486 aa13.88□□□□□ -0.19
HDLBP-214ENST00000427183 CCDC93Q567U6 631 aa13.88□□□□□ -0.19
HDLBP-214ENST00000427183 NCOA5Q9HCD5 579 aaKnown RBP13.88□□□□□ -0.19
HDLBP-214ENST00000427183 MYCLP12524 364 aaPredicted RBP13.87□□□□□ -0.19
HDLBP-214ENST00000427183 RASSF2P50749 326 aa13.87□□□□□ -0.19
HDLBP-214ENST00000427183 PHLDB3Q6NSJ2 640 aa13.87□□□□□ -0.19
HDLBP-214ENST00000427183 TRMT44Q8IYL2 757 aaKnown RBP13.87□□□□□ -0.19
HDLBP-214ENST00000427183 RDH13Q8NBN7 331 aa13.87□□□□□ -0.19
HDLBP-214ENST00000427183 CARD14Q9BXL6 1004 aa13.87□□□□□ -0.19
HDLBP-214ENST00000427183 CFAP74Q9C0B2 1584 aa13.87□□□□□ -0.19
HDLBP-214ENST00000427183 IFNB1P01574 187 aa13.87□□□□□ -0.19
HDLBP-214ENST00000427183 JADE1Q6IE81 842 aa13.87□□□□□ -0.19
HDLBP-214ENST00000427183 ADAT2Q7Z6V5 191 aaKnown RBP13.87□□□□□ -0.19
HDLBP-214ENST00000427183 PPP4R1Q8TF05 950 aa13.87□□□□□ -0.19
HDLBP-214ENST00000427183 NSMCE1Q8WV22 266 aa13.87□□□□□ -0.19
HDLBP-214ENST00000427183 KRT12Q99456 494 aa13.87□□□□□ -0.19
HDLBP-214ENST00000427183 SEPT10Q9P0V9 454 aa13.87□□□□□ -0.19
HDLBP-214ENST00000427183 GNAT2P19087 354 aa13.87□□□□□ -0.19
HDLBP-214ENST00000427183 CASP2P42575 452 aa13.87□□□□□ -0.19
HDLBP-214ENST00000427183 PHEXP78562 749 aa13.87□□□□□ -0.19
HDLBP-214ENST00000427183 SCYL1Q96KG9 808 aa13.87□□□□□ -0.19
HDLBP-214ENST00000427183 NOD1Q9Y239 953 aa13.87□□□□□ -0.19
HDLBP-214ENST00000427183 BZW2Q9Y6E2 419 aaKnown RBP13.87□□□□□ -0.19
HDLBP-214ENST00000427183 TMTC4Q5T4D3 741 aa13.87□□□□□ -0.19
HDLBP-214ENST00000427183 ATP2A3Q93084 1043 aa13.87□□□□□ -0.19
HDLBP-214ENST00000427183 NLRC4Q9NPP4 1024 aa13.87□□□□□ -0.19
HDLBP-214ENST00000427183 ANO3Q9BYT9 981 aa13.87□□□□□ -0.19
HDLBP-214ENST00000427183 TRIM4Q9C037 500 aa13.87□□□□□ -0.19
HDLBP-214ENST00000427183 KLHL14Q9P2G3 628 aa13.87□□□□□ -0.19
HDLBP-214ENST00000427183 ANKRD36BQ8N2N9 1353 aa13.86□□□□□ -0.19
HDLBP-214ENST00000427183 GABPB1Q06547 395 aaPredicted RBP13.86□□□□□ -0.19
HDLBP-214ENST00000427183 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.86□□□□□ -0.19
HDLBP-214ENST00000427183 RBM28Q9NW13 759 aaKnown RBP13.86□□□□□ -0.19
HDLBP-214ENST00000427183 ARHGEF35A5YM69 484 aa13.86□□□□□ -0.19
HDLBP-214ENST00000427183 CWF19L2Q2TBE0 894 aaKnown RBP13.86□□□□□ -0.19
HDLBP-214ENST00000427183 ANO1Q5XXA6 986 aa13.86□□□□□ -0.19
HDLBP-214ENST00000427183 MYRIPQ8NFW9 859 aa13.86□□□□□ -0.19
HDLBP-214ENST00000427183 BLZF1Q9H2G9 400 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms