RNA–Protein interactions for RNA: ENST00000426678.1

NCKIPSD-205, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 5

Gene NCKIPSD, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-205ENST00000426678 TMEM179Q6ZVK1 233 aa17.41■□□□□ 0.38
NCKIPSD-205ENST00000426678 C16orf86Q6ZW13 317 aa17.41■□□□□ 0.38
NCKIPSD-205ENST00000426678 ANKRD13CQ8N6S4 541 aa17.41■□□□□ 0.38
NCKIPSD-205ENST00000426678 TRIM47Q96LD4 638 aa17.41■□□□□ 0.38
NCKIPSD-205ENST00000426678 CCDC17Q96LX7 622 aa17.41■□□□□ 0.38
NCKIPSD-205ENST00000426678 PTCH2Q9Y6C5 1203 aa17.41■□□□□ 0.38
NCKIPSD-205ENST00000426678 MGAMO43451 1857 aa17.41■□□□□ 0.38
NCKIPSD-205ENST00000426678 TRIM6-TRIM34B2RNG4 842 aa17.4■□□□□ 0.38
NCKIPSD-205ENST00000426678 HOXA7P31268 230 aaPredicted RBP17.4■□□□□ 0.38
NCKIPSD-205ENST00000426678 GUCY1A2P33402 732 aa17.4■□□□□ 0.38
NCKIPSD-205ENST00000426678 FAM110CQ1W6H9 321 aa17.4■□□□□ 0.38
NCKIPSD-205ENST00000426678 SBK1Q52WX2 424 aa17.4■□□□□ 0.38
NCKIPSD-205ENST00000426678 C12orf42Q96LP6 360 aa17.4■□□□□ 0.38
NCKIPSD-205ENST00000426678 SEC62Q99442 399 aaKnown RBP17.4■□□□□ 0.38
NCKIPSD-205ENST00000426678 NACAP1Q9BZK3 213 aa17.4■□□□□ 0.38
NCKIPSD-205ENST00000426678 KIAA1683Q9H0B3 1180 aa17.4■□□□□ 0.38
NCKIPSD-205ENST00000426678 EMILIN3Q9NT22 766 aa17.4■□□□□ 0.38
NCKIPSD-205ENST00000426678 MINDY4BA8MYZ0 360 aa17.39■□□□□ 0.37
NCKIPSD-205ENST00000426678 AKR1B1P15121 316 aa17.39■□□□□ 0.37
NCKIPSD-205ENST00000426678 CTGFP29279 349 aa17.39■□□□□ 0.37
NCKIPSD-205ENST00000426678 SLC9C1Q4G0N8 1177 aa17.39■□□□□ 0.37
NCKIPSD-205ENST00000426678 ACER1Q8TDN7 264 aa17.39■□□□□ 0.37
NCKIPSD-205ENST00000426678 EPB41L4AQ9HCS5 686 aaPredicted RBP17.39■□□□□ 0.37
NCKIPSD-205ENST00000426678 SRRDQ9UH36 339 aa17.39■□□□□ 0.37
NCKIPSD-205ENST00000426678 MYPNQ86TC9 1320 aa17.39■□□□□ 0.37
NCKIPSD-205ENST00000426678 PATL2C9JE40 543 aaKnown RBP17.38■□□□□ 0.37
NCKIPSD-205ENST00000426678 SMIM22K7EJ46 135 aa17.38■□□□□ 0.37
NCKIPSD-205ENST00000426678 TNPO2O14787 897 aaKnown RBP17.38■□□□□ 0.37
NCKIPSD-205ENST00000426678 HERVK_113P62684 666 aa17.38■□□□□ 0.37
NCKIPSD-205ENST00000426678 ICA1Q05084 483 aa17.38■□□□□ 0.37
NCKIPSD-205ENST00000426678 NBPF11Q86T75 865 aa17.38■□□□□ 0.37
NCKIPSD-205ENST00000426678 ROBO3Q96MS0 1386 aa17.38■□□□□ 0.37
NCKIPSD-205ENST00000426678 VCAM1P19320 739 aa17.37■□□□□ 0.37
NCKIPSD-205ENST00000426678 PLEKHM2Q8IWE5 1019 aa17.37■□□□□ 0.37
NCKIPSD-205ENST00000426678 IFNL3Q8IZI9 196 aa17.37■□□□□ 0.37
NCKIPSD-205ENST00000426678 RAET1EQ8TD07 263 aa17.37■□□□□ 0.37
NCKIPSD-205ENST00000426678 GTF3C2Q8WUA4 911 aaPredicted RBP17.37■□□□□ 0.37
NCKIPSD-205ENST00000426678 RILPL2Q969X0 211 aa17.37■□□□□ 0.37
NCKIPSD-205ENST00000426678 ARMC5Q96C12 935 aa17.37■□□□□ 0.37
NCKIPSD-205ENST00000426678 NAPBQ9H115 298 aa17.37■□□□□ 0.37
NCKIPSD-205ENST00000426678 SH2D4AQ9H788 454 aa17.37■□□□□ 0.37
NCKIPSD-205ENST00000426678 ZNF287Q9HBT7 754 aa17.37■□□□□ 0.37
NCKIPSD-205ENST00000426678 ARHGEF10LQ9HCE6 1279 aa17.37■□□□□ 0.37
NCKIPSD-205ENST00000426678 USP17L15C9J2P7 530 aa17.36■□□□□ 0.37
NCKIPSD-205ENST00000426678 USP17L13C9JLJ4 530 aa17.36■□□□□ 0.37
NCKIPSD-205ENST00000426678 USP17L11C9JVI0 530 aa17.36■□□□□ 0.37
NCKIPSD-205ENST00000426678 USP17L18D6R9N7 530 aa17.36■□□□□ 0.37
NCKIPSD-205ENST00000426678 USP17L22D6RA61 530 aa17.36■□□□□ 0.37
NCKIPSD-205ENST00000426678 USP17L17D6RBQ6 530 aa17.36■□□□□ 0.37
NCKIPSD-205ENST00000426678 USP17L19D6RCP7 530 aa17.36■□□□□ 0.37
NCKIPSD-205ENST00000426678 USP17L20D6RJB6 530 aa17.36■□□□□ 0.37
NCKIPSD-205ENST00000426678 USP17L24Q0WX57 530 aa17.36■□□□□ 0.37
NCKIPSD-205ENST00000426678 TICAM2Q86XR7 235 aa17.36■□□□□ 0.37
NCKIPSD-205ENST00000426678 CLEC10AQ8IUN9 316 aa17.36■□□□□ 0.37
NCKIPSD-205ENST00000426678 STK11IPQ8N1F8 1099 aa17.36■□□□□ 0.37
NCKIPSD-205ENST00000426678 P2RX7Q99572 595 aaKnown RBP17.36■□□□□ 0.37
NCKIPSD-205ENST00000426678 OSBPL3Q9H4L5 887 aa17.36■□□□□ 0.37
NCKIPSD-205ENST00000426678 MKNK2Q9HBH9 465 aa17.36■□□□□ 0.37
NCKIPSD-205ENST00000426678 HELLSQ9NRZ9 838 aa17.36■□□□□ 0.37
NCKIPSD-205ENST00000426678 A0A1W2PRG0 241 aa17.35■□□□□ 0.37
NCKIPSD-205ENST00000426678 RGS19P49795 217 aa17.35■□□□□ 0.37
NCKIPSD-205ENST00000426678 PRKCZQ05513 592 aa17.35■□□□□ 0.37
NCKIPSD-205ENST00000426678 CCDC129Q6ZRS4 1044 aa17.35■□□□□ 0.37
NCKIPSD-205ENST00000426678 COA7Q96BR5 231 aa17.35■□□□□ 0.37
NCKIPSD-205ENST00000426678 RPAP3Q9H6T3 665 aaPredicted RBP17.35■□□□□ 0.37
NCKIPSD-205ENST00000426678 KANSL2Q9H9L4 492 aa17.35■□□□□ 0.37
NCKIPSD-205ENST00000426678 MORF4L1Q9UBU8 362 aa17.35■□□□□ 0.37
NCKIPSD-205ENST00000426678 HTTP42858 3142 aa17.35■□□□□ 0.37
NCKIPSD-205ENST00000426678 SLC3A2P08195 630 aaKnown RBP17.34■□□□□ 0.37
NCKIPSD-205ENST00000426678 RASA1P20936 1047 aa17.34■□□□□ 0.37
NCKIPSD-205ENST00000426678 ATP2B2Q01814 1243 aa17.34■□□□□ 0.37
NCKIPSD-205ENST00000426678 MLLT1Q03111 559 aaPredicted RBP17.34■□□□□ 0.37
NCKIPSD-205ENST00000426678 GPRC5AQ8NFJ5 357 aa17.34■□□□□ 0.37
NCKIPSD-205ENST00000426678 SH3TC2Q8TF17 1288 aa17.34■□□□□ 0.37
NCKIPSD-205ENST00000426678 ZNF333Q96JL9 665 aa17.34■□□□□ 0.37
NCKIPSD-205ENST00000426678 PAGR1Q9BTK6 254 aa17.34■□□□□ 0.37
NCKIPSD-205ENST00000426678 A0A0D9SFI3 127 aa17.33■□□□□ 0.36
NCKIPSD-205ENST00000426678 GRK4P32298 578 aa17.33■□□□□ 0.36
NCKIPSD-205ENST00000426678 PDE4BQ07343 736 aa17.33■□□□□ 0.36
NCKIPSD-205ENST00000426678 PPARAQ07869 468 aa17.33■□□□□ 0.36
NCKIPSD-205ENST00000426678 MCMDC2Q4G0Z9 681 aa17.33■□□□□ 0.36
NCKIPSD-205ENST00000426678 CATSPERGQ6ZRH7 1159 aa17.33■□□□□ 0.36
NCKIPSD-205ENST00000426678 CCAR1Q8IX12 1150 aaKnown RBP17.33■□□□□ 0.36
NCKIPSD-205ENST00000426678 LPAR1Q92633 364 aa17.33■□□□□ 0.36
NCKIPSD-205ENST00000426678 FAM227BQ96M60 508 aa17.33■□□□□ 0.36
NCKIPSD-205ENST00000426678 TMX2Q9Y320 296 aa17.33■□□□□ 0.36
NCKIPSD-205ENST00000426678 GREB1LQ9C091 1923 aaPredicted RBP17.33■□□□□ 0.36
NCKIPSD-205ENST00000426678 RBBP6Q7Z6E9 1792 aaKnown RBP17.33■□□□□ 0.36
NCKIPSD-205ENST00000426678 EEF2P13639 858 aaKnown RBP17.32■□□□□ 0.36
NCKIPSD-205ENST00000426678 FLT3LGP49771 235 aa17.32■□□□□ 0.36
NCKIPSD-205ENST00000426678 NMIQ13287 307 aaPredicted RBP17.32■□□□□ 0.36
NCKIPSD-205ENST00000426678 ZNF444Q8N0Y2 327 aaPredicted RBP17.32■□□□□ 0.36
NCKIPSD-205ENST00000426678 TMEM106CQ9BVX2 250 aa17.32■□□□□ 0.36
NCKIPSD-205ENST00000426678 TANGO6Q9C0B7 1094 aa17.32■□□□□ 0.36
NCKIPSD-205ENST00000426678 VCPKMTQ9H867 229 aa17.32■□□□□ 0.36
NCKIPSD-205ENST00000426678 TXNRD2Q9NNW7 524 aa17.32■□□□□ 0.36
NCKIPSD-205ENST00000426678 GABRQQ9UN88 632 aa17.32■□□□□ 0.36
NCKIPSD-205ENST00000426678 PRDM1O75626 825 aa17.31■□□□□ 0.36
NCKIPSD-205ENST00000426678 MYCP01106 439 aaPredicted RBP17.31■□□□□ 0.36
NCKIPSD-205ENST00000426678 ERVK-9P63128 1117 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms