RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 SH3TC2Q8TF17 1288 aa22.03■■□□□ 1.12
SMARCAL1-205ENST00000425815 TAOK2Q9UL54 1235 aa22.03■■□□□ 1.12
SMARCAL1-205ENST00000425815 LOC285556D6RIA3 1793 aa22.02■■□□□ 1.12
SMARCAL1-205ENST00000425815 AKR1B1P15121 316 aa22.02■■□□□ 1.12
SMARCAL1-205ENST00000425815 GCLCP48506 637 aaPredicted RBP22.02■■□□□ 1.12
SMARCAL1-205ENST00000425815 ZYXQ15942 572 aaKnown RBP22.02■■□□□ 1.12
SMARCAL1-205ENST00000425815 SLC9C1Q4G0N8 1177 aa22.02■■□□□ 1.12
SMARCAL1-205ENST00000425815 SBK1Q52WX2 424 aa22.02■■□□□ 1.12
SMARCAL1-205ENST00000425815 GIMAP6Q6P9H5 292 aa22.02■■□□□ 1.12
SMARCAL1-205ENST00000425815 LNPKQ9C0E8 428 aa22.02■■□□□ 1.12
SMARCAL1-205ENST00000425815 EPB41L4AQ9HCS5 686 aaPredicted RBP22.02■■□□□ 1.12
SMARCAL1-205ENST00000425815 TXNRD2Q9NNW7 524 aa22.02■■□□□ 1.12
SMARCAL1-205ENST00000425815 MYPNQ86TC9 1320 aa22.02■■□□□ 1.12
SMARCAL1-205ENST00000425815 MPHOSPH10O00566 681 aaKnown RBP22.01■■□□□ 1.11
SMARCAL1-205ENST00000425815 ZMYM1Q5SVZ6 1142 aa22.01■■□□□ 1.11
SMARCAL1-205ENST00000425815 B4GALNT3Q6L9W6 998 aa22.01■■□□□ 1.11
SMARCAL1-205ENST00000425815 FSD1Q9BTV5 496 aa22.01■■□□□ 1.11
SMARCAL1-205ENST00000425815 RBPJLQ9UBG7 517 aa22.01■■□□□ 1.11
SMARCAL1-205ENST00000425815 MORF4L1Q9UBU8 362 aa22.01■■□□□ 1.11
SMARCAL1-205ENST00000425815 ZBTB47Q9UFB7 747 aaPredicted RBP22.01■■□□□ 1.11
SMARCAL1-205ENST00000425815 PATL2C9JE40 543 aaKnown RBP22■■□□□ 1.11
SMARCAL1-205ENST00000425815 HERVK_113P62684 666 aa22■■□□□ 1.11
SMARCAL1-205ENST00000425815 IRX3P78415 501 aaPredicted RBP22■■□□□ 1.11
SMARCAL1-205ENST00000425815 Q3C1V9 767 aa22■■□□□ 1.11
SMARCAL1-205ENST00000425815 KIAA1755Q5JYT7 1200 aa22■■□□□ 1.11
SMARCAL1-205ENST00000425815 TMEM179Q6ZVK1 233 aa22■■□□□ 1.11
SMARCAL1-205ENST00000425815 NBPF11Q86T75 865 aa22■■□□□ 1.11
SMARCAL1-205ENST00000425815 DDRGK1Q96HY6 314 aa22■■□□□ 1.11
SMARCAL1-205ENST00000425815 FEZ1Q99689 392 aa22■■□□□ 1.11
SMARCAL1-205ENST00000425815 NAV1Q8NEY1 1877 aa22■■□□□ 1.11
SMARCAL1-205ENST00000425815 USP14P54578 494 aa21.99■■□□□ 1.11
SMARCAL1-205ENST00000425815 CATSPERGQ6ZRH7 1159 aa21.99■■□□□ 1.11
SMARCAL1-205ENST00000425815 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.99■■□□□ 1.11
SMARCAL1-205ENST00000425815 ARPP21Q9UBL0 812 aaPredicted RBP21.99■■□□□ 1.11
SMARCAL1-205ENST00000425815 GNAT2P19087 354 aa21.98■■□□□ 1.11
SMARCAL1-205ENST00000425815 VCAM1P19320 739 aa21.98■■□□□ 1.11
SMARCAL1-205ENST00000425815 FLT3LGP49771 235 aa21.98■■□□□ 1.11
SMARCAL1-205ENST00000425815 NUCB1Q02818 461 aa21.98■■□□□ 1.11
SMARCAL1-205ENST00000425815 LRRFIP1Q32MZ4 808 aaKnown RBP21.98■■□□□ 1.11
SMARCAL1-205ENST00000425815 CHD1LQ86WJ1 897 aa21.98■■□□□ 1.11
SMARCAL1-205ENST00000425815 CLEC10AQ8IUN9 316 aa21.98■■□□□ 1.11
SMARCAL1-205ENST00000425815 IFNL3Q8IZI9 196 aa21.98■■□□□ 1.11
SMARCAL1-205ENST00000425815 RAET1EQ8TD07 263 aa21.98■■□□□ 1.11
SMARCAL1-205ENST00000425815 CCDC17Q96LX7 622 aa21.98■■□□□ 1.11
SMARCAL1-205ENST00000425815 USP17L15C9J2P7 530 aa21.97■■□□□ 1.11
SMARCAL1-205ENST00000425815 USP17L13C9JLJ4 530 aa21.97■■□□□ 1.11
SMARCAL1-205ENST00000425815 USP17L11C9JVI0 530 aa21.97■■□□□ 1.11
SMARCAL1-205ENST00000425815 USP17L18D6R9N7 530 aa21.97■■□□□ 1.11
SMARCAL1-205ENST00000425815 USP17L22D6RA61 530 aa21.97■■□□□ 1.11
SMARCAL1-205ENST00000425815 USP17L17D6RBQ6 530 aa21.97■■□□□ 1.11
SMARCAL1-205ENST00000425815 USP17L19D6RCP7 530 aa21.97■■□□□ 1.11
SMARCAL1-205ENST00000425815 USP17L20D6RJB6 530 aa21.97■■□□□ 1.11
SMARCAL1-205ENST00000425815 TNPO2O14787 897 aaKnown RBP21.97■■□□□ 1.11
SMARCAL1-205ENST00000425815 MYCP01106 439 aaPredicted RBP21.97■■□□□ 1.11
SMARCAL1-205ENST00000425815 EN2P19622 333 aaPredicted RBP21.97■■□□□ 1.11
SMARCAL1-205ENST00000425815 GRK4P32298 578 aa21.97■■□□□ 1.11
SMARCAL1-205ENST00000425815 USP17L24Q0WX57 530 aa21.97■■□□□ 1.11
SMARCAL1-205ENST00000425815 AMOTL1Q8IY63 956 aa21.97■■□□□ 1.11
SMARCAL1-205ENST00000425815 EVI5LQ96CN4 794 aa21.97■■□□□ 1.11
SMARCAL1-205ENST00000425815 GJD2Q9UKL4 321 aa21.97■■□□□ 1.11
SMARCAL1-205ENST00000425815 BRCA2P51587 3418 aa21.97■■□□□ 1.11
SMARCAL1-205ENST00000425815 MINDY4BA8MYZ0 360 aa21.96■■□□□ 1.11
SMARCAL1-205ENST00000425815 FOXP2O15409 715 aa21.96■■□□□ 1.11
SMARCAL1-205ENST00000425815 CNMDO75829 334 aa21.96■■□□□ 1.11
SMARCAL1-205ENST00000425815 MTFR1Q15390 333 aa21.96■■□□□ 1.11
SMARCAL1-205ENST00000425815 CCDC129Q6ZRS4 1044 aa21.96■■□□□ 1.11
SMARCAL1-205ENST00000425815 PLEKHM2Q8IWE5 1019 aa21.96■■□□□ 1.11
SMARCAL1-205ENST00000425815 STK11IPQ8N1F8 1099 aa21.96■■□□□ 1.11
SMARCAL1-205ENST00000425815 GPRC5AQ8NFJ5 357 aa21.96■■□□□ 1.11
SMARCAL1-205ENST00000425815 TNRC18O15417 2968 aaPredicted RBP21.96■■□□□ 1.11
SMARCAL1-205ENST00000425815 IRX6P78412 446 aaPredicted RBP21.95■■□□□ 1.1
SMARCAL1-205ENST00000425815 IRF5Q13568 498 aa21.95■■□□□ 1.1
SMARCAL1-205ENST00000425815 RPAP3Q9H6T3 665 aaPredicted RBP21.95■■□□□ 1.1
SMARCAL1-205ENST00000425815 TMX2Q9Y320 296 aa21.95■■□□□ 1.1
SMARCAL1-205ENST00000425815 MYH7P12883 1935 aa21.94■■□□□ 1.1
SMARCAL1-205ENST00000425815 APPP05067 770 aa21.94■■□□□ 1.1
SMARCAL1-205ENST00000425815 RASA1P20936 1047 aa21.94■■□□□ 1.1
SMARCAL1-205ENST00000425815 COA7Q96BR5 231 aa21.94■■□□□ 1.1
SMARCAL1-205ENST00000425815 OSBPL3Q9H4L5 887 aa21.94■■□□□ 1.1
SMARCAL1-205ENST00000425815 ADCY3O60266 1144 aa21.93■■□□□ 1.1
SMARCAL1-205ENST00000425815 EEF2P13639 858 aaKnown RBP21.93■■□□□ 1.1
SMARCAL1-205ENST00000425815 TDO2P48775 406 aa21.93■■□□□ 1.1
SMARCAL1-205ENST00000425815 ERVK-9P63128 1117 aa21.93■■□□□ 1.1
SMARCAL1-205ENST00000425815 ERVK-24P63145 666 aa21.93■■□□□ 1.1
SMARCAL1-205ENST00000425815 ICA1Q05084 483 aa21.93■■□□□ 1.1
SMARCAL1-205ENST00000425815 PXYLP1Q8TE99 480 aa21.93■■□□□ 1.1
SMARCAL1-205ENST00000425815 ROBO3Q96MS0 1386 aa21.93■■□□□ 1.1
SMARCAL1-205ENST00000425815 TMEM106CQ9BVX2 250 aa21.93■■□□□ 1.1
SMARCAL1-205ENST00000425815 BAZ2AQ9UIF9 1905 aaKnown RBP21.93■■□□□ 1.1
SMARCAL1-205ENST00000425815 ELNP15502 786 aa21.92■■□□□ 1.1
SMARCAL1-205ENST00000425815 VPS53Q5VIR6 699 aa21.92■■□□□ 1.1
SMARCAL1-205ENST00000425815 LBX2Q6XYB7 198 aa21.92■■□□□ 1.1
SMARCAL1-205ENST00000425815 SLAIN1Q8ND83 568 aa21.92■■□□□ 1.1
SMARCAL1-205ENST00000425815 GTF3C2Q8WUA4 911 aaPredicted RBP21.92■■□□□ 1.1
SMARCAL1-205ENST00000425815 FAM227BQ96M60 508 aa21.92■■□□□ 1.1
SMARCAL1-205ENST00000425815 PAGR1Q9BTK6 254 aa21.92■■□□□ 1.1
SMARCAL1-205ENST00000425815 PORCNQ9H237 461 aa21.92■■□□□ 1.1
SMARCAL1-205ENST00000425815 KANSL2Q9H9L4 492 aa21.92■■□□□ 1.1
SMARCAL1-205ENST00000425815 BTBD7Q9P203 1132 aa21.92■■□□□ 1.1
SMARCAL1-205ENST00000425815 RABGAP1Q9Y3P9 1069 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms