RNA–Protein interactions for RNA: ENST00000425060.1

IGHV3-47-201, Transcript of immunoglobulin heavy variable 3-47 (pseudogene), humanhuman

BASIC

Gene IGHV3-47, Length 335 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-47-201ENST00000425060 IFNL3Q8IZI9 196 aa21.45■■□□□ 1.02
IGHV3-47-201ENST00000425060 TRIM47Q96LD4 638 aa21.45■■□□□ 1.02
IGHV3-47-201ENST00000425060 CCDC17Q96LX7 622 aa21.45■■□□□ 1.02
IGHV3-47-201ENST00000425060 HTTP42858 3142 aa21.44■■□□□ 1.02
IGHV3-47-201ENST00000425060 A0A1W2PRG0 241 aa21.44■■□□□ 1.02
IGHV3-47-201ENST00000425060 FOXP2O15409 715 aa21.44■■□□□ 1.02
IGHV3-47-201ENST00000425060 OSBPP22059 807 aa21.44■■□□□ 1.02
IGHV3-47-201ENST00000425060 PSMC4P43686 418 aa21.44■■□□□ 1.02
IGHV3-47-201ENST00000425060 TMEM179Q6ZVK1 233 aa21.44■■□□□ 1.02
IGHV3-47-201ENST00000425060 SMCR8Q8TEV9 937 aaPredicted RBP21.44■■□□□ 1.02
IGHV3-47-201ENST00000425060 MPHOSPH10O00566 681 aaKnown RBP21.43■■□□□ 1.02
IGHV3-47-201ENST00000425060 GCLCP48506 637 aaPredicted RBP21.43■■□□□ 1.02
IGHV3-47-201ENST00000425060 USP14P54578 494 aa21.43■■□□□ 1.02
IGHV3-47-201ENST00000425060 P2RX7Q99572 595 aaKnown RBP21.43■■□□□ 1.02
IGHV3-47-201ENST00000425060 ROBO3Q96MS0 1386 aa21.43■■□□□ 1.02
IGHV3-47-201ENST00000425060 PDE4AP27815 886 aa21.42■■□□□ 1.02
IGHV3-47-201ENST00000425060 RGS19P49795 217 aa21.42■■□□□ 1.02
IGHV3-47-201ENST00000425060 FAM110CQ1W6H9 321 aa21.42■■□□□ 1.02
IGHV3-47-201ENST00000425060 CCDC129Q6ZRS4 1044 aa21.42■■□□□ 1.02
IGHV3-47-201ENST00000425060 ANKRD13CQ8N6S4 541 aa21.42■■□□□ 1.02
IGHV3-47-201ENST00000425060 HELLSQ9NRZ9 838 aa21.42■■□□□ 1.02
IGHV3-47-201ENST00000425060 PTCH2Q9Y6C5 1203 aa21.42■■□□□ 1.02
IGHV3-47-201ENST00000425060 MYH8P13535 1937 aa21.41■■□□□ 1.02
IGHV3-47-201ENST00000425060 MINDY4BA8MYZ0 360 aa21.41■■□□□ 1.02
IGHV3-47-201ENST00000425060 APPP05067 770 aa21.41■■□□□ 1.02
IGHV3-47-201ENST00000425060 PRMT2P55345 433 aa21.41■■□□□ 1.02
IGHV3-47-201ENST00000425060 POTEEQ6S8J3 1075 aa21.41■■□□□ 1.02
IGHV3-47-201ENST00000425060 FEZ1Q99689 392 aa21.41■■□□□ 1.02
IGHV3-47-201ENST00000425060 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.41■■□□□ 1.02
IGHV3-47-201ENST00000425060 SRRDQ9UH36 339 aa21.41■■□□□ 1.02
IGHV3-47-201ENST00000425060 A0A0D9SFI3 127 aa21.4■■□□□ 1.02
IGHV3-47-201ENST00000425060 TRIM6-TRIM34B2RNG4 842 aa21.4■■□□□ 1.02
IGHV3-47-201ENST00000425060 ECM2O94769 699 aaPredicted RBP21.4■■□□□ 1.02
IGHV3-47-201ENST00000425060 FMNL1O95466 1100 aaPredicted RBP21.4■■□□□ 1.02
IGHV3-47-201ENST00000425060 RASA1P20936 1047 aa21.4■■□□□ 1.02
IGHV3-47-201ENST00000425060 TDO2P48775 406 aa21.4■■□□□ 1.02
IGHV3-47-201ENST00000425060 IRX3P78415 501 aaPredicted RBP21.4■■□□□ 1.02
IGHV3-47-201ENST00000425060 ZYXQ15942 572 aaKnown RBP21.4■■□□□ 1.02
IGHV3-47-201ENST00000425060 CLEC10AQ8IUN9 316 aa21.4■■□□□ 1.02
IGHV3-47-201ENST00000425060 ARMC5Q96C12 935 aa21.4■■□□□ 1.02
IGHV3-47-201ENST00000425060 FAM227BQ96M60 508 aa21.4■■□□□ 1.02
IGHV3-47-201ENST00000425060 MORF4L1Q9UBU8 362 aa21.4■■□□□ 1.02
IGHV3-47-201ENST00000425060 VCAM1P19320 739 aa21.39■■□□□ 1.01
IGHV3-47-201ENST00000425060 FCGRTP55899 365 aa21.39■■□□□ 1.01
IGHV3-47-201ENST00000425060 HERVK_113P62684 666 aa21.39■■□□□ 1.01
IGHV3-47-201ENST00000425060 VPS53Q5VIR6 699 aa21.39■■□□□ 1.01
IGHV3-47-201ENST00000425060 CATSPERGQ6ZRH7 1159 aa21.39■■□□□ 1.01
IGHV3-47-201ENST00000425060 RILPL2Q969X0 211 aa21.39■■□□□ 1.01
IGHV3-47-201ENST00000425060 NACAP1Q9BZK3 213 aa21.39■■□□□ 1.01
IGHV3-47-201ENST00000425060 MGAMO43451 1857 aa21.39■■□□□ 1.01
IGHV3-47-201ENST00000425060 USP17L15C9J2P7 530 aa21.38■■□□□ 1.01
IGHV3-47-201ENST00000425060 USP17L13C9JLJ4 530 aa21.38■■□□□ 1.01
IGHV3-47-201ENST00000425060 USP17L11C9JVI0 530 aa21.38■■□□□ 1.01
IGHV3-47-201ENST00000425060 USP17L18D6R9N7 530 aa21.38■■□□□ 1.01
IGHV3-47-201ENST00000425060 USP17L22D6RA61 530 aa21.38■■□□□ 1.01
IGHV3-47-201ENST00000425060 USP17L17D6RBQ6 530 aa21.38■■□□□ 1.01
IGHV3-47-201ENST00000425060 USP17L19D6RCP7 530 aa21.38■■□□□ 1.01
IGHV3-47-201ENST00000425060 USP17L20D6RJB6 530 aa21.38■■□□□ 1.01
IGHV3-47-201ENST00000425060 HOXD10P28358 340 aa21.38■■□□□ 1.01
IGHV3-47-201ENST00000425060 ICA1Q05084 483 aa21.38■■□□□ 1.01
IGHV3-47-201ENST00000425060 USP17L24Q0WX57 530 aa21.38■■□□□ 1.01
IGHV3-47-201ENST00000425060 NMIQ13287 307 aaPredicted RBP21.38■■□□□ 1.01
IGHV3-47-201ENST00000425060 MCMDC2Q4G0Z9 681 aa21.38■■□□□ 1.01
IGHV3-47-201ENST00000425060 KIAA1755Q5JYT7 1200 aa21.38■■□□□ 1.01
IGHV3-47-201ENST00000425060 NAPBQ9H115 298 aa21.38■■□□□ 1.01
IGHV3-47-201ENST00000425060 TXNRD2Q9NNW7 524 aa21.38■■□□□ 1.01
IGHV3-47-201ENST00000425060 RBPJLQ9UBG7 517 aa21.38■■□□□ 1.01
IGHV3-47-201ENST00000425060 TMX2Q9Y320 296 aa21.38■■□□□ 1.01
IGHV3-47-201ENST00000425060 GREB1LQ9C091 1923 aaPredicted RBP21.37■■□□□ 1.01
IGHV3-47-201ENST00000425060 SDSP20132 328 aa21.37■■□□□ 1.01
IGHV3-47-201ENST00000425060 ALX1Q15699 326 aa21.37■■□□□ 1.01
IGHV3-47-201ENST00000425060 STK11IPQ8N1F8 1099 aa21.37■■□□□ 1.01
IGHV3-47-201ENST00000425060 KANSL2Q9H9L4 492 aa21.37■■□□□ 1.01
IGHV3-47-201ENST00000425060 PEX10O60683 326 aa21.36■■□□□ 1.01
IGHV3-47-201ENST00000425060 SOX10P56693 466 aa21.36■■□□□ 1.01
IGHV3-47-201ENST00000425060 PPARAQ07869 468 aa21.36■■□□□ 1.01
IGHV3-47-201ENST00000425060 ZNF589Q86UQ0 364 aaPredicted RBP21.36■■□□□ 1.01
IGHV3-47-201ENST00000425060 MKNK2Q9HBH9 465 aa21.36■■□□□ 1.01
IGHV3-47-201ENST00000425060 GABRQQ9UN88 632 aa21.36■■□□□ 1.01
IGHV3-47-201ENST00000425060 MYPNQ86TC9 1320 aa21.35■■□□□ 1.01
IGHV3-47-201ENST00000425060 IGKV6D-41A0A0C4DH26 115 aa21.35■■□□□ 1.01
IGHV3-47-201ENST00000425060 EEF2P13639 858 aaKnown RBP21.35■■□□□ 1.01
IGHV3-47-201ENST00000425060 PRKCZQ05513 592 aa21.35■■□□□ 1.01
IGHV3-47-201ENST00000425060 Q3C1V9 767 aa21.35■■□□□ 1.01
IGHV3-47-201ENST00000425060 LBX2Q6XYB7 198 aa21.35■■□□□ 1.01
IGHV3-47-201ENST00000425060 GTF3C2Q8WUA4 911 aaPredicted RBP21.35■■□□□ 1.01
IGHV3-47-201ENST00000425060 ZNF333Q96JL9 665 aa21.35■■□□□ 1.01
IGHV3-47-201ENST00000425060 RPAP3Q9H6T3 665 aaPredicted RBP21.35■■□□□ 1.01
IGHV3-47-201ENST00000425060 ARHGEF10LQ9HCE6 1279 aa21.35■■□□□ 1.01
IGHV3-47-201ENST00000425060 PRDM1O75626 825 aa21.34■■□□□ 1.01
IGHV3-47-201ENST00000425060 SLC9C1Q4G0N8 1177 aa21.34■■□□□ 1.01
IGHV3-47-201ENST00000425060 LPAR1Q92633 364 aa21.34■■□□□ 1.01
IGHV3-47-201ENST00000425060 VCPKMTQ9H867 229 aa21.34■■□□□ 1.01
IGHV3-47-201ENST00000425060 DOCK3Q8IZD9 2030 aa21.34■■□□□ 1.01
IGHV3-47-201ENST00000425060 TNPO2O14787 897 aaKnown RBP21.33■■□□□ 1.01
IGHV3-47-201ENST00000425060 CNMDO75829 334 aa21.33■■□□□ 1.01
IGHV3-47-201ENST00000425060 HSPD1P10809 573 aaKnown RBP21.33■■□□□ 1.01
IGHV3-47-201ENST00000425060 GSPT1P15170 499 aaKnown RBP21.33■■□□□ 1.01
IGHV3-47-201ENST00000425060 GPRC5AQ8NFJ5 357 aa21.33■■□□□ 1.01
IGHV3-47-201ENST00000425060 SH2D4AQ9H788 454 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 709.4 ms