RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 RAB3GAP1Q15042 981 aa20.08■□□□□ 0.81
COL7A1-202ENST00000422991 OPTNQ96CV9 577 aa20.08■□□□□ 0.81
COL7A1-202ENST00000422991 SLC10A3P09131 477 aa20.07■□□□□ 0.8
COL7A1-202ENST00000422991 KRT32Q14532 448 aa20.07■□□□□ 0.8
COL7A1-202ENST00000422991 RALYLQ86SE5 291 aaKnown RBP20.07■□□□□ 0.8
COL7A1-202ENST00000422991 CLEC10AQ8IUN9 316 aa20.07■□□□□ 0.8
COL7A1-202ENST00000422991 NCOA7Q8NI08 942 aa20.07■□□□□ 0.8
COL7A1-202ENST00000422991 OTUD5Q96G74 571 aa20.07■□□□□ 0.8
COL7A1-202ENST00000422991 TBC1D2Q9BYX2 928 aa20.07■□□□□ 0.8
COL7A1-202ENST00000422991 WBP1LQ9NX94 342 aa20.07■□□□□ 0.8
COL7A1-202ENST00000422991 ZHX2Q9Y6X8 837 aa20.07■□□□□ 0.8
COL7A1-202ENST00000422991 LOC285556D6RIA3 1793 aa20.07■□□□□ 0.8
COL7A1-202ENST00000422991 FAM155AB1AL88 458 aaPredicted RBP20.06■□□□□ 0.8
COL7A1-202ENST00000422991 MAP2K2P36507 400 aa20.06■□□□□ 0.8
COL7A1-202ENST00000422991 ICA1Q05084 483 aa20.06■□□□□ 0.8
COL7A1-202ENST00000422991 SPRYD7Q5W111 196 aa20.06■□□□□ 0.8
COL7A1-202ENST00000422991 MB21D2Q8IYB1 491 aaPredicted RBP20.06■□□□□ 0.8
COL7A1-202ENST00000422991 WDR18Q9BV38 432 aa20.06■□□□□ 0.8
COL7A1-202ENST00000422991 ZBTB48P10074 688 aaPredicted RBP20.05■□□□□ 0.8
COL7A1-202ENST00000422991 ADCK5Q3MIX3 580 aa20.05■□□□□ 0.8
COL7A1-202ENST00000422991 CYB5R4Q7L1T6 521 aa20.05■□□□□ 0.8
COL7A1-202ENST00000422991 CCDC102AQ96A19 550 aa20.05■□□□□ 0.8
COL7A1-202ENST00000422991 CEP95Q96GE4 821 aa20.05■□□□□ 0.8
COL7A1-202ENST00000422991 KANSL2Q9H9L4 492 aa20.05■□□□□ 0.8
COL7A1-202ENST00000422991 AS3MTQ9HBK9 375 aa20.05■□□□□ 0.8
COL7A1-202ENST00000422991 IL17RBQ9NRM6 502 aa20.05■□□□□ 0.8
COL7A1-202ENST00000422991 TCP11L1Q9NUJ3 509 aa20.05■□□□□ 0.8
COL7A1-202ENST00000422991 ZSWIM5Q9P217 1185 aa20.05■□□□□ 0.8
COL7A1-202ENST00000422991 AFG3L2Q9Y4W6 797 aa20.05■□□□□ 0.8
COL7A1-202ENST00000422991 NMT2O60551 498 aa20.04■□□□□ 0.8
COL7A1-202ENST00000422991 COL9A3Q14050 684 aaPredicted RBP20.04■□□□□ 0.8
COL7A1-202ENST00000422991 SIAH1Q8IUQ4 282 aa20.04■□□□□ 0.8
COL7A1-202ENST00000422991 ZNF280CQ8ND82 737 aa20.04■□□□□ 0.8
COL7A1-202ENST00000422991 MTMR4Q9NYA4 1195 aa20.04■□□□□ 0.8
COL7A1-202ENST00000422991 KCNH4Q9UQ05 1017 aa20.04■□□□□ 0.8
COL7A1-202ENST00000422991 IRF6O14896 467 aa20.03■□□□□ 0.8
COL7A1-202ENST00000422991 FOXN1O15353 648 aa20.03■□□□□ 0.8
COL7A1-202ENST00000422991 AOC2O75106 756 aa20.03■□□□□ 0.8
COL7A1-202ENST00000422991 NOVP48745 357 aa20.03■□□□□ 0.8
COL7A1-202ENST00000422991 ANTXR2P58335 489 aa20.03■□□□□ 0.8
COL7A1-202ENST00000422991 ANAPC15P60006 121 aa20.03■□□□□ 0.8
COL7A1-202ENST00000422991 NOGQ13253 232 aa20.03■□□□□ 0.8
COL7A1-202ENST00000422991 ACER1Q8TDN7 264 aa20.03■□□□□ 0.8
COL7A1-202ENST00000422991 IL17RAQ96F46 866 aa20.03■□□□□ 0.8
COL7A1-202ENST00000422991 JAKMIP1Q96N16 626 aaKnown RBP20.03■□□□□ 0.8
COL7A1-202ENST00000422991 NEK1Q96PY6 1258 aa20.03■□□□□ 0.8
COL7A1-202ENST00000422991 NYAP2Q9P242 653 aa20.03■□□□□ 0.8
COL7A1-202ENST00000422991 TRIM75PA6NK02 468 aa20.02■□□□□ 0.8
COL7A1-202ENST00000422991 EEF2P13639 858 aaKnown RBP20.02■□□□□ 0.8
COL7A1-202ENST00000422991 CTCFP49711 727 aaPredicted RBP20.02■□□□□ 0.8
COL7A1-202ENST00000422991 MKRN3Q13064 507 aaKnown RBP20.02■□□□□ 0.8
COL7A1-202ENST00000422991 SPP2Q13103 211 aa20.02■□□□□ 0.8
COL7A1-202ENST00000422991 PPP4R3BQ5MIZ7 849 aa20.02■□□□□ 0.8
COL7A1-202ENST00000422991 IQCA1Q86XH1 822 aa20.02■□□□□ 0.8
COL7A1-202ENST00000422991 ZKSCAN3Q9BRR0 538 aa20.02■□□□□ 0.8
COL7A1-202ENST00000422991 UPF2Q9HAU5 1272 aaKnown RBP20.02■□□□□ 0.8
COL7A1-202ENST00000422991 ARHGEF10LQ9HCE6 1279 aa20.02■□□□□ 0.8
COL7A1-202ENST00000422991 A0A1W2PRG0 241 aa20.01■□□□□ 0.79
COL7A1-202ENST00000422991 CXCL11O14625 94 aa20.01■□□□□ 0.79
COL7A1-202ENST00000422991 TTLL1O95922 423 aa20.01■□□□□ 0.79
COL7A1-202ENST00000422991 MCM5P33992 734 aa20.01■□□□□ 0.79
COL7A1-202ENST00000422991 MTMR2Q13614 643 aa20.01■□□□□ 0.79
COL7A1-202ENST00000422991 COL13A1Q5TAT6 717 aaPredicted RBP20.01■□□□□ 0.79
COL7A1-202ENST00000422991 RCSD1Q6JBY9 416 aa20.01■□□□□ 0.79
COL7A1-202ENST00000422991 ZSCAN10Q96SZ4 725 aaPredicted RBP20.01■□□□□ 0.79
COL7A1-202ENST00000422991 UBAC1Q9BSL1 405 aa20.01■□□□□ 0.79
COL7A1-202ENST00000422991 BEGAINQ9BUH8 593 aa20.01■□□□□ 0.79
COL7A1-202ENST00000422991 C22orf23Q9BZE7 217 aa20.01■□□□□ 0.79
COL7A1-202ENST00000422991 KIAA1683Q9H0B3 1180 aa20.01■□□□□ 0.79
COL7A1-202ENST00000422991 TNKSO95271 1327 aa20.01■□□□□ 0.79
COL7A1-202ENST00000422991 WDR19Q8NEZ3 1342 aa20.01■□□□□ 0.79
COL7A1-202ENST00000422991 A0A0G2JLL6 359 aaPredicted RBP20■□□□□ 0.79
COL7A1-202ENST00000422991 USP17L10C9JJH3 530 aa20■□□□□ 0.79
COL7A1-202ENST00000422991 PRC1O43663 620 aa20■□□□□ 0.79
COL7A1-202ENST00000422991 HMGB1P09429 215 aaKnown RBP20■□□□□ 0.79
COL7A1-202ENST00000422991 RBM25P49756 843 aaKnown RBP20■□□□□ 0.79
COL7A1-202ENST00000422991 GTF2A2P52657 109 aa20■□□□□ 0.79
COL7A1-202ENST00000422991 BACE1P56817 501 aa20■□□□□ 0.79
COL7A1-202ENST00000422991 ATP2B2Q01814 1243 aa20■□□□□ 0.79
COL7A1-202ENST00000422991 SNAPC2Q13487 334 aa20■□□□□ 0.79
COL7A1-202ENST00000422991 CCDC178Q5BJE1 867 aa20■□□□□ 0.79
COL7A1-202ENST00000422991 PRRT2Q7Z6L0 340 aaPredicted RBP20■□□□□ 0.79
COL7A1-202ENST00000422991 ENAHQ8N8S7 591 aaPredicted RBP20■□□□□ 0.79
COL7A1-202ENST00000422991 MS4A4AQ96JQ5 239 aa20■□□□□ 0.79
COL7A1-202ENST00000422991 FEZ1Q99689 392 aa20■□□□□ 0.79
COL7A1-202ENST00000422991 TM6SF1Q9BZW5 370 aa20■□□□□ 0.79
COL7A1-202ENST00000422991 SH2D4AQ9H788 454 aa20■□□□□ 0.79
COL7A1-202ENST00000422991 STX8Q9UNK0 236 aa20■□□□□ 0.79
COL7A1-202ENST00000422991 TMX2Q9Y320 296 aa20■□□□□ 0.79
COL7A1-202ENST00000422991 CASTP20810 708 aaKnown RBP19.99■□□□□ 0.79
COL7A1-202ENST00000422991 PSMA5P28066 241 aa19.99■□□□□ 0.79
COL7A1-202ENST00000422991 SEC23AQ15436 765 aa19.99■□□□□ 0.79
COL7A1-202ENST00000422991 SH3D19Q5HYK7 790 aa19.99■□□□□ 0.79
COL7A1-202ENST00000422991 CHST3Q7LGC8 479 aa19.99■□□□□ 0.79
COL7A1-202ENST00000422991 MKL1Q969V6 931 aa19.99■□□□□ 0.79
COL7A1-202ENST00000422991 TTC14Q96N46 770 aa19.99■□□□□ 0.79
COL7A1-202ENST00000422991 MTA3Q9BTC8 594 aa19.99■□□□□ 0.79
COL7A1-202ENST00000422991 CLIP2Q9UDT6 1046 aa19.99■□□□□ 0.79
COL7A1-202ENST00000422991 SYNPO2Q9UMS6 1093 aa19.99■□□□□ 0.79
COL7A1-202ENST00000422991 C19orf81C9J6K1 198 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 190.9 ms