RNA–Protein interactions for RNA: ENST00000419300.3

LINC00963-202, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best) BASIC

Gene LINC00963, Length 9,557 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-202ENST00000419300 NBPF9Q3BBW0 867 aa11.13□□□□□ -0.63
LINC00963-202ENST00000419300 PPP4R1Q8TF05 950 aa11.13□□□□□ -0.63
LINC00963-202ENST00000419300 ZKSCAN3Q9BRR0 538 aa11.13□□□□□ -0.63
LINC00963-202ENST00000419300 RETREG2Q8NC44 543 aa11.13□□□□□ -0.63
LINC00963-202ENST00000419300 NFE2L3Q9Y4A8 694 aa11.13□□□□□ -0.63
LINC00963-202ENST00000419300 TROVE2P10155 538 aaKnown RBP eCLIP11.13□□□□□ -0.63
LINC00963-202ENST00000419300 DEUP1Q05D60 604 aa11.13□□□□□ -0.63
LINC00963-202ENST00000419300 TDRD7Q8NHU6 1098 aaKnown RBP11.13□□□□□ -0.63
LINC00963-202ENST00000419300 HVCN1Q96D96 273 aa11.13□□□□□ -0.63
LINC00963-202ENST00000419300 CDC37L1Q7L3B6 337 aa11.13□□□□□ -0.63
LINC00963-202ENST00000419300 C8orf58Q8NAV2 365 aa11.13□□□□□ -0.63
LINC00963-202ENST00000419300 ACTR5Q9H9F9 607 aaPredicted RBP11.13□□□□□ -0.63
LINC00963-202ENST00000419300 MED23Q9ULK4 1368 aa11.13□□□□□ -0.63
LINC00963-202ENST00000419300 CCDC169A6NNP5 214 aa11.13□□□□□ -0.63
LINC00963-202ENST00000419300 LRRC2Q9BYS8 371 aa11.13□□□□□ -0.63
LINC00963-202ENST00000419300 MLH3Q9UHC1 1453 aa11.13□□□□□ -0.63
LINC00963-202ENST00000419300 TCP1P17987 556 aaKnown RBP11.13□□□□□ -0.63
LINC00963-202ENST00000419300 ZNF131P52739 623 aa11.13□□□□□ -0.63
LINC00963-202ENST00000419300 ST5P78524 1137 aa11.13□□□□□ -0.63
LINC00963-202ENST00000419300 SEPT14Q6ZU15 432 aa11.13□□□□□ -0.63
LINC00963-202ENST00000419300 HYOU1Q9Y4L1 999 aa11.13□□□□□ -0.63
LINC00963-202ENST00000419300 SNX14Q9Y5W7 946 aa11.13□□□□□ -0.63
LINC00963-202ENST00000419300 CASZ1Q86V15 1759 aa11.13□□□□□ -0.63
LINC00963-202ENST00000419300 TMEM87AQ8NBN3 555 aa11.13□□□□□ -0.63
LINC00963-202ENST00000419300 BBOF1Q8ND07 529 aa11.13□□□□□ -0.63
LINC00963-202ENST00000419300 XPO4Q9C0E2 1151 aaKnown RBP11.13□□□□□ -0.63
LINC00963-202ENST00000419300 BICC1Q9H694 974 aaKnown RBP11.13□□□□□ -0.63
LINC00963-202ENST00000419300 RNF14Q9UBS8 474 aa11.13□□□□□ -0.63
LINC00963-202ENST00000419300 N4BP1O75113 896 aaKnown RBP11.12□□□□□ -0.63
LINC00963-202ENST00000419300 KRT71Q3SY84 523 aa11.12□□□□□ -0.63
LINC00963-202ENST00000419300 PPP1R13BQ96KQ4 1090 aa11.12□□□□□ -0.63
LINC00963-202ENST00000419300 HAUS4Q9H6D7 363 aa11.12□□□□□ -0.63
LINC00963-202ENST00000419300 TMEM63CQ9P1W3 806 aa11.12□□□□□ -0.63
LINC00963-202ENST00000419300 EPHB4P54760 987 aa11.12□□□□□ -0.63
LINC00963-202ENST00000419300 GALNT17Q6IS24 598 aa11.12□□□□□ -0.63
LINC00963-202ENST00000419300 WAPLQ7Z5K2 1190 aa11.12□□□□□ -0.63
LINC00963-202ENST00000419300 CCDC89Q8N998 374 aa11.12□□□□□ -0.63
LINC00963-202ENST00000419300 PPP1R1BQ9UD71 204 aaPredicted RBP11.12□□□□□ -0.63
LINC00963-202ENST00000419300 KCNG1Q9UIX4 513 aa11.12□□□□□ -0.63
LINC00963-202ENST00000419300 PTCH1Q13635 1447 aa11.12□□□□□ -0.63
LINC00963-202ENST00000419300 KCNJ18B7U540 433 aa11.12□□□□□ -0.63
LINC00963-202ENST00000419300 ETF1P62495 437 aaKnown RBP11.12□□□□□ -0.63
LINC00963-202ENST00000419300 KCNJ12Q14500 433 aa11.12□□□□□ -0.63
LINC00963-202ENST00000419300 ZNF274Q96GC6 653 aaPredicted RBP11.12□□□□□ -0.63
LINC00963-202ENST00000419300 NT5C3AQ9H0P0 336 aa11.12□□□□□ -0.63
LINC00963-202ENST00000419300 PHF8Q9UPP1 1060 aa11.12□□□□□ -0.63
LINC00963-202ENST00000419300 CCDC85AQ96PX6 553 aaPredicted RBP11.12□□□□□ -0.63
LINC00963-202ENST00000419300 ANKRD2Q9GZV1 360 aa11.12□□□□□ -0.63
LINC00963-202ENST00000419300 GPT2Q8TD30 523 aa11.12□□□□□ -0.63
LINC00963-202ENST00000419300 TSC1Q92574 1164 aa11.12□□□□□ -0.63
LINC00963-202ENST00000419300 EFCAB6Q5THR3 1501 aa11.12□□□□□ -0.63
LINC00963-202ENST00000419300 ZMYM6O95789 1325 aa11.12□□□□□ -0.63
LINC00963-202ENST00000419300 ACEP12821 1306 aa11.12□□□□□ -0.63
LINC00963-202ENST00000419300 CYP7A1P22680 504 aa11.12□□□□□ -0.63
LINC00963-202ENST00000419300 VSIG1Q86XK7 387 aa11.12□□□□□ -0.63
LINC00963-202ENST00000419300 CCHCR1Q8TD31 782 aa11.12□□□□□ -0.63
LINC00963-202ENST00000419300 WHAMMQ8TF30 809 aa11.12□□□□□ -0.63
LINC00963-202ENST00000419300 DRC3Q9H069 523 aa11.12□□□□□ -0.63
LINC00963-202ENST00000419300 CUEDC2Q9H467 287 aa11.12□□□□□ -0.63
LINC00963-202ENST00000419300 VEZTQ9HBM0 779 aa11.12□□□□□ -0.63
LINC00963-202ENST00000419300 PCDH11XQ9BZA7 1347 aa11.12□□□□□ -0.63
LINC00963-202ENST00000419300 PCDH11YQ9BZA8 1340 aa11.12□□□□□ -0.63
LINC00963-202ENST00000419300 CCNT1O60563 726 aaKnown RBP11.12□□□□□ -0.63
LINC00963-202ENST00000419300 PLCB3Q01970 1234 aa11.12□□□□□ -0.63
LINC00963-202ENST00000419300 AGTPBP1Q9UPW5 1226 aa11.12□□□□□ -0.63
LINC00963-202ENST00000419300 TRAF5O00463 557 aa11.11□□□□□ -0.63
LINC00963-202ENST00000419300 IKBKBO14920 756 aa11.11□□□□□ -0.63
LINC00963-202ENST00000419300 DNM2P50570 870 aa11.11□□□□□ -0.63
LINC00963-202ENST00000419300 HHATQ5VTY9 493 aa11.11□□□□□ -0.63
LINC00963-202ENST00000419300 RPAINQ86UA6 219 aa11.11□□□□□ -0.63
LINC00963-202ENST00000419300 MAGEB6Q8N7X4 407 aa11.11□□□□□ -0.63
LINC00963-202ENST00000419300 CCDC88AQ3V6T2 1871 aa11.11□□□□□ -0.63
LINC00963-202ENST00000419300 LRRD1A4D1F6 860 aa11.11□□□□□ -0.63
LINC00963-202ENST00000419300 LAD1O00515 517 aa11.11□□□□□ -0.63
LINC00963-202ENST00000419300 DNAJC8O75937 253 aaPredicted RBP11.11□□□□□ -0.63
LINC00963-202ENST00000419300 SUN1O94901 812 aa11.11□□□□□ -0.63
LINC00963-202ENST00000419300 SMIM23A6NLE4 172 aa11.11□□□□□ -0.63
LINC00963-202ENST00000419300 MTX1Q13505 466 aa11.11□□□□□ -0.63
LINC00963-202ENST00000419300 DCAF17Q5H9S7 520 aaPredicted RBP11.11□□□□□ -0.63
LINC00963-202ENST00000419300 EPSTI1Q96J88 318 aa11.11□□□□□ -0.63
LINC00963-202ENST00000419300 TMEM110-MUSTN1A8MSY1 372 aa11.11□□□□□ -0.63
LINC00963-202ENST00000419300 PUM3Q15397 648 aaKnown RBP11.11□□□□□ -0.63
LINC00963-202ENST00000419300 FBXO41Q8TF61 875 aa11.11□□□□□ -0.63
LINC00963-202ENST00000419300 RIPOR2Q9Y4F9 1068 aa11.11□□□□□ -0.63
LINC00963-202ENST00000419300 PER1O15534 1290 aaPredicted RBP11.11□□□□□ -0.63
LINC00963-202ENST00000419300 PPFIA2O75334 1257 aa11.11□□□□□ -0.63
LINC00963-202ENST00000419300 MRPS9P82933 396 aaKnown RBP11.11□□□□□ -0.63
LINC00963-202ENST00000419300 NCBP1Q09161 790 aaKnown RBP11.11□□□□□ -0.63
LINC00963-202ENST00000419300 SLC17A8Q8NDX2 589 aa11.11□□□□□ -0.63
LINC00963-202ENST00000419300 DISP1Q96F81 1524 aa11.11□□□□□ -0.63
LINC00963-202ENST00000419300 PNMA8AQ86V59 439 aaPredicted RBP11.11□□□□□ -0.63
LINC00963-202ENST00000419300 PCP11498 1178 aaKnown RBP11.11□□□□□ -0.63
LINC00963-202ENST00000419300 ZC3H15Q8WU90 426 aaKnown RBP11.11□□□□□ -0.63
LINC00963-202ENST00000419300 SDCCAG8Q86SQ7 713 aaPredicted RBP11.11□□□□□ -0.63
LINC00963-202ENST00000419300 CDAN1Q8IWY9 1227 aa11.11□□□□□ -0.63
LINC00963-202ENST00000419300 MCTP2Q6DN12 878 aa11.1□□□□□ -0.63
LINC00963-202ENST00000419300 KRT25Q7Z3Z0 450 aa11.1□□□□□ -0.63
LINC00963-202ENST00000419300 CENPKQ9BS16 269 aa11.1□□□□□ -0.63
LINC00963-202ENST00000419300 A0A087WUV0 522 aaPredicted RBP11.1□□□□□ -0.63
LINC00963-202ENST00000419300 CUL1Q13616 776 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms