RNA–Protein interactions for RNA: ENST00000417641.6

VRK2-203, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK2, Length 2,381 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-203ENST00000417641 ATRNO75882 1429 aa8.9□□□□□ -0.98
VRK2-203ENST00000417641 PKD1L3Q7Z443 1732 aa8.9□□□□□ -0.98
VRK2-203ENST00000417641 SETD1BQ9UPS6 1966 aaKnown RBP8.9□□□□□ -0.98
VRK2-203ENST00000417641 GOLGA8AA7E2F4 631 aa8.9□□□□□ -0.99
VRK2-203ENST00000417641 NBPF26B4DH59 902 aa8.9□□□□□ -0.99
VRK2-203ENST00000417641 STX17P56962 302 aa8.9□□□□□ -0.99
VRK2-203ENST00000417641 TRIM29Q14134 588 aa8.9□□□□□ -0.99
VRK2-203ENST00000417641 NBPF14Q5TI25 921 aa8.9□□□□□ -0.99
VRK2-203ENST00000417641 NBPF10Q6P3W6 841 aaKnown RBP8.9□□□□□ -0.99
VRK2-203ENST00000417641 CYP26C1Q6V0L0 522 aa8.9□□□□□ -0.99
VRK2-203ENST00000417641 MICU3Q86XE3 530 aa8.9□□□□□ -0.99
VRK2-203ENST00000417641 NBPF15Q8N660 670 aa8.9□□□□□ -0.99
VRK2-203ENST00000417641 CCDC148Q8NFR7 591 aa8.9□□□□□ -0.99
VRK2-203ENST00000417641 RIN2Q8WYP3 895 aaPredicted RBP8.9□□□□□ -0.99
VRK2-203ENST00000417641 PAGE5Q96GU1 130 aa8.9□□□□□ -0.99
VRK2-203ENST00000417641 MYCBPQ99417 103 aaPredicted RBP8.9□□□□□ -0.99
VRK2-203ENST00000417641 GRIN2DO15399 1336 aa8.89□□□□□ -0.99
VRK2-203ENST00000417641 CDC25AP30304 524 aa8.89□□□□□ -0.99
VRK2-203ENST00000417641 HOXD11P31277 338 aaPredicted RBP8.89□□□□□ -0.99
VRK2-203ENST00000417641 ADD2P35612 726 aa8.89□□□□□ -0.99
VRK2-203ENST00000417641 IRAK1P51617 712 aa8.89□□□□□ -0.99
VRK2-203ENST00000417641 SSRP1Q08945 709 aaKnown RBP8.89□□□□□ -0.99
VRK2-203ENST00000417641 STIM1Q13586 685 aa8.89□□□□□ -0.99
VRK2-203ENST00000417641 KRT31Q15323 416 aa8.89□□□□□ -0.99
VRK2-203ENST00000417641 CCNI2Q6ZMN8 369 aaPredicted RBP8.89□□□□□ -0.99
VRK2-203ENST00000417641 SLC26A6Q9BXS9 759 aa8.89□□□□□ -0.99
VRK2-203ENST00000417641 FAM107BQ9H098 131 aa8.89□□□□□ -0.99
VRK2-203ENST00000417641 CWC25Q9NXE8 425 aaPredicted RBP8.89□□□□□ -0.99
VRK2-203ENST00000417641 FBXO3Q9UK99 471 aa8.89□□□□□ -0.99
VRK2-203ENST00000417641 TBC1D2BQ9UPU7 963 aa8.89□□□□□ -0.99
VRK2-203ENST00000417641 MYO5AQ9Y4I1 1855 aaKnown RBP8.89□□□□□ -0.99
VRK2-203ENST00000417641 PARP4Q9UKK3 1724 aaKnown RBP8.89□□□□□ -0.99
VRK2-203ENST00000417641 LOC102724159A0A0B4J2E5 919 aa8.88□□□□□ -0.99
VRK2-203ENST00000417641 B4E1Z4 1266 aa8.88□□□□□ -0.99
VRK2-203ENST00000417641 MYBL2P10244 700 aa8.88□□□□□ -0.99
VRK2-203ENST00000417641 MCM3P25205 808 aa8.88□□□□□ -0.99
VRK2-203ENST00000417641 GGCXP38435 758 aa8.88□□□□□ -0.99
VRK2-203ENST00000417641 PWP2Q15269 919 aaKnown RBP8.88□□□□□ -0.99
VRK2-203ENST00000417641 FILIP1LQ4L180 1135 aa8.88□□□□□ -0.99
VRK2-203ENST00000417641 KCNV1Q6PIU1 500 aa8.88□□□□□ -0.99
VRK2-203ENST00000417641 WASF1Q92558 559 aa8.88□□□□□ -0.99
VRK2-203ENST00000417641 SHISA4Q96DD7 197 aa8.88□□□□□ -0.99
VRK2-203ENST00000417641 GSDMAQ96QA5 445 aa8.88□□□□□ -0.99
VRK2-203ENST00000417641 CHP1Q99653 195 aa8.88□□□□□ -0.99
VRK2-203ENST00000417641 SLF1Q9BQI6 1058 aa8.88□□□□□ -0.99
VRK2-203ENST00000417641 MYL10Q9BUA6 226 aa8.88□□□□□ -0.99
VRK2-203ENST00000417641 HAUS4Q9H6D7 363 aa8.88□□□□□ -0.99
VRK2-203ENST00000417641 KAT14Q9H8E8 782 aa8.88□□□□□ -0.99
VRK2-203ENST00000417641 CEP126Q9P2H0 1117 aa8.88□□□□□ -0.99
VRK2-203ENST00000417641 TRIM10Q9UDY6 481 aa8.88□□□□□ -0.99
VRK2-203ENST00000417641 KCNJ14Q9UNX9 436 aa8.88□□□□□ -0.99
VRK2-203ENST00000417641 LAMB4A4D0S4 1761 aa8.88□□□□□ -0.99
VRK2-203ENST00000417641 NDUFA10O95299 355 aa8.88□□□□□ -0.99
VRK2-203ENST00000417641 ATP1A1P05023 1023 aaKnown RBP8.88□□□□□ -0.99
VRK2-203ENST00000417641 CEBPAP49715 358 aaPredicted RBP8.88□□□□□ -0.99
VRK2-203ENST00000417641 HERVK_113P62684 666 aa8.88□□□□□ -0.99
VRK2-203ENST00000417641 NR5A1Q13285 461 aa8.88□□□□□ -0.99
VRK2-203ENST00000417641 TRIM14Q14142 442 aa8.88□□□□□ -0.99
VRK2-203ENST00000417641 SART3Q15020 963 aaKnown RBP8.88□□□□□ -0.99
VRK2-203ENST00000417641 ALX1Q15699 326 aa8.88□□□□□ -0.99
VRK2-203ENST00000417641 MAP9Q49MG5 647 aa8.88□□□□□ -0.99
VRK2-203ENST00000417641 PI16Q6UXB8 463 aa8.88□□□□□ -0.99
VRK2-203ENST00000417641 TTLL7Q6ZT98 887 aa8.88□□□□□ -0.99
VRK2-203ENST00000417641 TEX2Q8IWB9 1127 aa8.88□□□□□ -0.99
VRK2-203ENST00000417641 AENQ8WTP8 325 aaKnown RBP8.88□□□□□ -0.99
VRK2-203ENST00000417641 SH3GL2Q99962 352 aa8.88□□□□□ -0.99
VRK2-203ENST00000417641 HDAC6Q9UBN7 1215 aa8.88□□□□□ -0.99
VRK2-203ENST00000417641 EPN1Q9Y6I3 576 aaPredicted RBP8.88□□□□□ -0.99
VRK2-203ENST00000417641 NUP188Q5SRE5 1749 aa8.88□□□□□ -0.99
VRK2-203ENST00000417641 CASP1P29466 404 aa8.87□□□□□ -0.99
VRK2-203ENST00000417641 COPB1P53618 953 aaKnown RBP8.87□□□□□ -0.99
VRK2-203ENST00000417641 KLHL10Q6JEL2 608 aa8.87□□□□□ -0.99
VRK2-203ENST00000417641 MICALL1Q8N3F8 863 aa8.87□□□□□ -0.99
VRK2-203ENST00000417641 OXER1Q8TDS5 423 aa8.87□□□□□ -0.99
VRK2-203ENST00000417641 SMARCC1Q92922 1105 aaPredicted RBP8.87□□□□□ -0.99
VRK2-203ENST00000417641 ZNF512BQ96KM6 892 aaPredicted RBP8.87□□□□□ -0.99
VRK2-203ENST00000417641 RPGRIP1Q96KN7 1286 aa8.87□□□□□ -0.99
VRK2-203ENST00000417641 DEF6Q9H4E7 631 aa8.87□□□□□ -0.99
VRK2-203ENST00000417641 TOMM22Q9NS69 142 aa8.87□□□□□ -0.99
VRK2-203ENST00000417641 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.87□□□□□ -0.992e-6■■■■□ 23.5
VRK2-203ENST00000417641 FAM169AQ9Y6X4 670 aa8.87□□□□□ -0.99
VRK2-203ENST00000417641 PDE2AO00408 941 aaPredicted RBP8.87□□□□□ -0.99
VRK2-203ENST00000417641 HNRNPH1P31943 449 aaKnown RBP8.87□□□□□ -0.99
VRK2-203ENST00000417641 AKAP17AQ02040 695 aaKnown RBP8.87□□□□□ -0.99
VRK2-203ENST00000417641 PPFIA1Q13136 1202 aa8.87□□□□□ -0.99
VRK2-203ENST00000417641 UBE3CQ15386 1083 aa8.87□□□□□ -0.99
VRK2-203ENST00000417641 SMYD4Q8IYR2 804 aaPredicted RBP8.87□□□□□ -0.99
VRK2-203ENST00000417641 FAM76AQ8TAV0 307 aa8.87□□□□□ -0.99
VRK2-203ENST00000417641 EPSTI1Q96J88 318 aa8.87□□□□□ -0.99
VRK2-203ENST00000417641 SELENOOQ9BVL4 669 aa8.87□□□□□ -0.99
VRK2-203ENST00000417641 EHD4Q9H223 541 aa8.87□□□□□ -0.99
VRK2-203ENST00000417641 INCENPQ9NQS7 918 aa8.87□□□□□ -0.99
VRK2-203ENST00000417641 TCRBV5S4A2TA0A5A2 114 aa8.86□□□□□ -0.99
VRK2-203ENST00000417641 EIF3HO15372 352 aaKnown RBP eCLIP8.86□□□□□ -0.99
VRK2-203ENST00000417641 ERLIN2O94905 339 aa8.86□□□□□ -0.99
VRK2-203ENST00000417641 KRT9P35527 623 aa8.86□□□□□ -0.99
VRK2-203ENST00000417641 MCAMP43121 646 aa8.86□□□□□ -0.99
VRK2-203ENST00000417641 CCT5P48643 541 aa8.86□□□□□ -0.99
VRK2-203ENST00000417641 PSEN1P49768 467 aa8.86□□□□□ -0.99
VRK2-203ENST00000417641 SAFBQ15424 915 aaKnown RBP eCLIP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms