RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 SH3TC2Q8TF17 1288 aa18.76■□□□□ 0.59
ITGB1-204ENST00000417122 C12orf42Q96LP6 360 aa18.76■□□□□ 0.59
ITGB1-204ENST00000417122 P2RX7Q99572 595 aaKnown RBP18.76■□□□□ 0.59
ITGB1-204ENST00000417122 FSD1Q9BTV5 496 aa18.76■□□□□ 0.59
ITGB1-204ENST00000417122 KIAA1683Q9H0B3 1180 aa18.76■□□□□ 0.59
ITGB1-204ENST00000417122 POTEFA5A3E0 1075 aa18.75■□□□□ 0.59
ITGB1-204ENST00000417122 SMIM22K7EJ46 135 aa18.75■□□□□ 0.59
ITGB1-204ENST00000417122 TNPO2O14787 897 aaKnown RBP18.75■□□□□ 0.59
ITGB1-204ENST00000417122 GPAA1O43292 621 aa18.75■□□□□ 0.59
ITGB1-204ENST00000417122 CDK8P49336 464 aa18.75■□□□□ 0.59
ITGB1-204ENST00000417122 ARPP21Q9UBL0 812 aaPredicted RBP18.75■□□□□ 0.59
ITGB1-204ENST00000417122 GABRQQ9UN88 632 aa18.75■□□□□ 0.59
ITGB1-204ENST00000417122 HTTP42858 3142 aa18.75■□□□□ 0.59
ITGB1-204ENST00000417122 GSG1L2A8MUP6 293 aa18.74■□□□□ 0.59
ITGB1-204ENST00000417122 M0R2C6 588 aa18.74■□□□□ 0.59
ITGB1-204ENST00000417122 HERVK_113P62684 666 aa18.74■□□□□ 0.59
ITGB1-204ENST00000417122 GIMAP6Q6P9H5 292 aa18.74■□□□□ 0.59
ITGB1-204ENST00000417122 TMEM179Q6ZVK1 233 aa18.74■□□□□ 0.59
ITGB1-204ENST00000417122 C16orf86Q6ZW13 317 aa18.74■□□□□ 0.59
ITGB1-204ENST00000417122 SMC5Q8IY18 1101 aa18.74■□□□□ 0.59
ITGB1-204ENST00000417122 CCDC17Q96LX7 622 aa18.74■□□□□ 0.59
ITGB1-204ENST00000417122 TMEM106CQ9BVX2 250 aa18.74■□□□□ 0.59
ITGB1-204ENST00000417122 STAP2Q9UGK3 403 aa18.74■□□□□ 0.59
ITGB1-204ENST00000417122 AKR1B1P15121 316 aa18.73■□□□□ 0.59
ITGB1-204ENST00000417122 GNAT2P19087 354 aa18.73■□□□□ 0.59
ITGB1-204ENST00000417122 GRK4P32298 578 aa18.73■□□□□ 0.59
ITGB1-204ENST00000417122 PDE1AP54750 535 aa18.73■□□□□ 0.59
ITGB1-204ENST00000417122 SBK1Q52WX2 424 aa18.73■□□□□ 0.59
ITGB1-204ENST00000417122 COA7Q96BR5 231 aa18.73■□□□□ 0.59
ITGB1-204ENST00000417122 SEC62Q99442 399 aaKnown RBP18.73■□□□□ 0.59
ITGB1-204ENST00000417122 MORF4L1Q9UBU8 362 aa18.73■□□□□ 0.59
ITGB1-204ENST00000417122 USP17L15C9J2P7 530 aa18.72■□□□□ 0.59
ITGB1-204ENST00000417122 USP17L13C9JLJ4 530 aa18.72■□□□□ 0.59
ITGB1-204ENST00000417122 USP17L11C9JVI0 530 aa18.72■□□□□ 0.59
ITGB1-204ENST00000417122 USP17L18D6R9N7 530 aa18.72■□□□□ 0.59
ITGB1-204ENST00000417122 USP17L22D6RA61 530 aa18.72■□□□□ 0.59
ITGB1-204ENST00000417122 USP17L17D6RBQ6 530 aa18.72■□□□□ 0.59
ITGB1-204ENST00000417122 USP17L19D6RCP7 530 aa18.72■□□□□ 0.59
ITGB1-204ENST00000417122 USP17L20D6RJB6 530 aa18.72■□□□□ 0.59
ITGB1-204ENST00000417122 MYCP01106 439 aaPredicted RBP18.72■□□□□ 0.59
ITGB1-204ENST00000417122 IGHDP01880 384 aa18.72■□□□□ 0.59
ITGB1-204ENST00000417122 VCAM1P19320 739 aa18.72■□□□□ 0.59
ITGB1-204ENST00000417122 FLT3LGP49771 235 aa18.72■□□□□ 0.59
ITGB1-204ENST00000417122 USP17L24Q0WX57 530 aa18.72■□□□□ 0.59
ITGB1-204ENST00000417122 ZMYM1Q5SVZ6 1142 aa18.72■□□□□ 0.59
ITGB1-204ENST00000417122 B4GALNT3Q6L9W6 998 aa18.72■□□□□ 0.59
ITGB1-204ENST00000417122 LNPKQ9C0E8 428 aa18.72■□□□□ 0.59
ITGB1-204ENST00000417122 DOCK3Q8IZD9 2030 aa18.71■□□□□ 0.59
ITGB1-204ENST00000417122 A0A1W2PRG0 241 aa18.71■□□□□ 0.59
ITGB1-204ENST00000417122 PATL2C9JE40 543 aaKnown RBP18.71■□□□□ 0.59
ITGB1-204ENST00000417122 APPP05067 770 aa18.71■□□□□ 0.59
ITGB1-204ENST00000417122 CATSPERGQ6ZRH7 1159 aa18.71■□□□□ 0.59
ITGB1-204ENST00000417122 GPRC5AQ8NFJ5 357 aa18.71■□□□□ 0.59
ITGB1-204ENST00000417122 GTF3C2Q8WUA4 911 aaPredicted RBP18.71■□□□□ 0.59
ITGB1-204ENST00000417122 EVI5LQ96CN4 794 aa18.71■□□□□ 0.59
ITGB1-204ENST00000417122 EPB41L4AQ9HCS5 686 aaPredicted RBP18.71■□□□□ 0.59
ITGB1-204ENST00000417122 TXNRD2Q9NNW7 524 aa18.71■□□□□ 0.59
ITGB1-204ENST00000417122 MINDY4BA8MYZ0 360 aa18.7■□□□□ 0.58
ITGB1-204ENST00000417122 PEX10O60683 326 aa18.7■□□□□ 0.58
ITGB1-204ENST00000417122 TDO2P48775 406 aa18.7■□□□□ 0.58
ITGB1-204ENST00000417122 ICA1Q05084 483 aa18.7■□□□□ 0.58
ITGB1-204ENST00000417122 IRF5Q13568 498 aa18.7■□□□□ 0.58
ITGB1-204ENST00000417122 SLAIN1Q8ND83 568 aa18.7■□□□□ 0.58
ITGB1-204ENST00000417122 RPAP3Q9H6T3 665 aaPredicted RBP18.7■□□□□ 0.58
ITGB1-204ENST00000417122 ARHGEF10LQ9HCE6 1279 aa18.7■□□□□ 0.58
ITGB1-204ENST00000417122 RBPJLQ9UBG7 517 aa18.7■□□□□ 0.58
ITGB1-204ENST00000417122 ADCY3O60266 1144 aa18.69■□□□□ 0.58
ITGB1-204ENST00000417122 EN2P19622 333 aaPredicted RBP18.69■□□□□ 0.58
ITGB1-204ENST00000417122 CHD1LQ86WJ1 897 aa18.69■□□□□ 0.58
ITGB1-204ENST00000417122 CLEC10AQ8IUN9 316 aa18.69■□□□□ 0.58
ITGB1-204ENST00000417122 IFNL3Q8IZI9 196 aa18.69■□□□□ 0.58
ITGB1-204ENST00000417122 STK11IPQ8N1F8 1099 aa18.69■□□□□ 0.58
ITGB1-204ENST00000417122 PAGR1Q9BTK6 254 aa18.69■□□□□ 0.58
ITGB1-204ENST00000417122 BIN2Q9UBW5 565 aaPredicted RBP18.69■□□□□ 0.58
ITGB1-204ENST00000417122 CENPFP49454 3210 aa18.69■□□□□ 0.58
ITGB1-204ENST00000417122 ROBO3Q96MS0 1386 aa18.68■□□□□ 0.58
ITGB1-204ENST00000417122 ERVK-9P63128 1117 aa18.68■□□□□ 0.58
ITGB1-204ENST00000417122 ERVK-24P63145 666 aa18.68■□□□□ 0.58
ITGB1-204ENST00000417122 UBXN2AP68543 259 aa18.68■□□□□ 0.58
ITGB1-204ENST00000417122 MTFR1Q15390 333 aa18.68■□□□□ 0.58
ITGB1-204ENST00000417122 Q3C1V9 767 aa18.68■□□□□ 0.58
ITGB1-204ENST00000417122 SIAH1Q8IUQ4 282 aa18.68■□□□□ 0.58
ITGB1-204ENST00000417122 PXYLP1Q8TE99 480 aa18.68■□□□□ 0.58
ITGB1-204ENST00000417122 NACAP1Q9BZK3 213 aa18.68■□□□□ 0.58
ITGB1-204ENST00000417122 SH2D4AQ9H788 454 aa18.68■□□□□ 0.58
ITGB1-204ENST00000417122 ELNP15502 786 aa18.67■□□□□ 0.58
ITGB1-204ENST00000417122 NUCB1Q02818 461 aa18.67■□□□□ 0.58
ITGB1-204ENST00000417122 POTEEQ6S8J3 1075 aa18.67■□□□□ 0.58
ITGB1-204ENST00000417122 KANSL2Q9H9L4 492 aa18.67■□□□□ 0.58
ITGB1-204ENST00000417122 MKNK2Q9HBH9 465 aa18.67■□□□□ 0.58
ITGB1-204ENST00000417122 GJD2Q9UKL4 321 aa18.67■□□□□ 0.58
ITGB1-204ENST00000417122 TMX2Q9Y320 296 aa18.67■□□□□ 0.58
ITGB1-204ENST00000417122 RABGAP1Q9Y3P9 1069 aa18.67■□□□□ 0.58
ITGB1-204ENST00000417122 PLXNB2O15031 1838 aa18.66■□□□□ 0.58
ITGB1-204ENST00000417122 EEF2P13639 858 aaKnown RBP18.66■□□□□ 0.58
ITGB1-204ENST00000417122 RASA1P20936 1047 aa18.66■□□□□ 0.58
ITGB1-204ENST00000417122 KIAA1755Q5JYT7 1200 aa18.66■□□□□ 0.58
ITGB1-204ENST00000417122 LBX2Q6XYB7 198 aa18.66■□□□□ 0.58
ITGB1-204ENST00000417122 CCAR1Q8IX12 1150 aaKnown RBP18.66■□□□□ 0.58
ITGB1-204ENST00000417122 LPAR1Q92633 364 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms