RNA–Protein interactions for RNA: ENST00000415749.1

EPHA4-204, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-204ENST00000415749 DEAF1O75398 565 aaPredicted RBP8.4□□□□□ -1.06
EPHA4-204ENST00000415749 CD68P34810 354 aaPredicted RBP8.4□□□□□ -1.06
EPHA4-204ENST00000415749 LRRC14Q15048 493 aa8.4□□□□□ -1.06
EPHA4-204ENST00000415749 EZH2Q15910 746 aaKnown RBP8.4□□□□□ -1.06
EPHA4-204ENST00000415749 ZNF394Q53GI3 561 aa8.4□□□□□ -1.06
EPHA4-204ENST00000415749 DIEXFQ68CQ4 756 aaKnown RBP8.4□□□□□ -1.06
EPHA4-204ENST00000415749 SDE2Q6IQ49 451 aa8.4□□□□□ -1.06
EPHA4-204ENST00000415749 SULF2Q8IWU5 870 aa8.4□□□□□ -1.06
EPHA4-204ENST00000415749 KLHDC7BQ96G42 594 aa8.4□□□□□ -1.06
EPHA4-204ENST00000415749 CORO1BQ9BR76 489 aa8.4□□□□□ -1.06
EPHA4-204ENST00000415749 SPATA31A3Q5VYP0 1347 aa8.39□□□□□ -1.07
EPHA4-204ENST00000415749 CNTNAP5Q8WYK1 1306 aa8.39□□□□□ -1.07
EPHA4-204ENST00000415749 ELNP15502 786 aa8.39□□□□□ -1.07
EPHA4-204ENST00000415749 ARNTP27540 789 aa8.39□□□□□ -1.07
EPHA4-204ENST00000415749 RPS26P62854 115 aaKnown RBP8.39□□□□□ -1.07
EPHA4-204ENST00000415749 PCNX4Q63HM2 1172 aa8.39□□□□□ -1.07
EPHA4-204ENST00000415749 TTBK2Q6IQ55 1244 aa8.39□□□□□ -1.07
EPHA4-204ENST00000415749 ERMP1Q7Z2K6 904 aa8.39□□□□□ -1.07
EPHA4-204ENST00000415749 KRT28Q7Z3Y7 464 aa8.39□□□□□ -1.07
EPHA4-204ENST00000415749 ZNF654Q8IZM8 581 aa8.39□□□□□ -1.07
EPHA4-204ENST00000415749 DDX41Q9UJV9 622 aaKnown RBP8.39□□□□□ -1.07
EPHA4-204ENST00000415749 PCDHGB7Q9Y5F8 929 aa8.39□□□□□ -1.07
EPHA4-204ENST00000415749 NALCNQ8IZF0 1738 aa8.39□□□□□ -1.07
EPHA4-204ENST00000415749 NRXN3Q9Y4C0 1643 aa8.39□□□□□ -1.07
EPHA4-204ENST00000415749 ADGRL2O95490 1459 aa8.38□□□□□ -1.07
EPHA4-204ENST00000415749 NUP155O75694 1391 aa8.38□□□□□ -1.07
EPHA4-204ENST00000415749 FAM83GA6ND36 823 aa8.38□□□□□ -1.07
EPHA4-204ENST00000415749 RNF225M0QZC1 329 aaPredicted RBP8.38□□□□□ -1.07
EPHA4-204ENST00000415749 SPATA31C1P0DKV0 1188 aa8.38□□□□□ -1.07
EPHA4-204ENST00000415749 LIG3P49916 1009 aa8.38□□□□□ -1.07
EPHA4-204ENST00000415749 RACK1P63244 317 aaKnown RBP8.38□□□□□ -1.07
EPHA4-204ENST00000415749 POU4F3Q15319 338 aa8.38□□□□□ -1.07
EPHA4-204ENST00000415749 MAP3K11Q16584 847 aa8.38□□□□□ -1.07
EPHA4-204ENST00000415749 HGSNATQ68CP4 663 aa8.38□□□□□ -1.07
EPHA4-204ENST00000415749 SCARA3Q6AZY7 606 aa8.38□□□□□ -1.07
EPHA4-204ENST00000415749 USP48Q86UV5 1035 aa8.38□□□□□ -1.07
EPHA4-204ENST00000415749 ALYREFQ86V81 257 aaKnown RBP8.38□□□□□ -1.07
EPHA4-204ENST00000415749 GALNT11Q8NCW6 608 aa8.38□□□□□ -1.07
EPHA4-204ENST00000415749 CBX8Q9HC52 389 aa8.38□□□□□ -1.07
EPHA4-204ENST00000415749 CYP8B1Q9UNU6 501 aa8.38□□□□□ -1.07
EPHA4-204ENST00000415749 PXDNQ92626 1479 aa8.38□□□□□ -1.07
EPHA4-204ENST00000415749 MARF1Q9Y4F3 1742 aaKnown RBP8.37□□□□□ -1.07
EPHA4-204ENST00000415749 E9PCH4 1651 aa8.37□□□□□ -1.07
EPHA4-204ENST00000415749 DLL1O00548 723 aa8.37□□□□□ -1.07
EPHA4-204ENST00000415749 PAGE1O75459 146 aa8.37□□□□□ -1.07
EPHA4-204ENST00000415749 GSTP1P09211 210 aaKnown RBP8.37□□□□□ -1.07
EPHA4-204ENST00000415749 GBP2P32456 591 aaPredicted RBP8.37□□□□□ -1.07
EPHA4-204ENST00000415749 NLRP12P59046 1061 aa8.37□□□□□ -1.07
EPHA4-204ENST00000415749 SOGA3Q5TF21 947 aa8.37□□□□□ -1.07
EPHA4-204ENST00000415749 EGFLAMQ63HQ2 1017 aa8.37□□□□□ -1.07
EPHA4-204ENST00000415749 IGF2-ASQ6U949 168 aa8.37□□□□□ -1.07
EPHA4-204ENST00000415749 TMEM74Q96NL1 305 aa8.37□□□□□ -1.07
EPHA4-204ENST00000415749 CAMKK2Q96RR4 588 aa8.37□□□□□ -1.07
EPHA4-204ENST00000415749 TRIM56Q9BRZ2 755 aaKnown RBP8.37□□□□□ -1.07
EPHA4-204ENST00000415749 USP26Q9BXU7 913 aa8.37□□□□□ -1.07
EPHA4-204ENST00000415749 SPHKAPQ2M3C7 1700 aa8.37□□□□□ -1.07
EPHA4-204ENST00000415749 MAOBP27338 520 aa8.36□□□□□ -1.07
EPHA4-204ENST00000415749 LLGL2Q6P1M3 1020 aa8.36□□□□□ -1.07
EPHA4-204ENST00000415749 AGMOQ6ZNB7 445 aa8.36□□□□□ -1.07
EPHA4-204ENST00000415749 VPS37DQ86XT2 251 aa8.36□□□□□ -1.07
EPHA4-204ENST00000415749 NACC1Q96RE7 527 aa8.36□□□□□ -1.07
EPHA4-204ENST00000415749 MRPL18Q9H0U6 180 aaKnown RBP8.36□□□□□ -1.07
EPHA4-204ENST00000415749 KBTBD4Q9NVX7 518 aa8.36□□□□□ -1.07
EPHA4-204ENST00000415749 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.36□□□□□ -1.07
EPHA4-204ENST00000415749 HFM1A2PYH4 1435 aa8.36□□□□□ -1.07
EPHA4-204ENST00000415749 FAM229AH3BQW9 127 aa8.35□□□□□ -1.07
EPHA4-204ENST00000415749 STK10O94804 968 aaKnown RBP8.35□□□□□ -1.07
EPHA4-204ENST00000415749 APBA3O96018 575 aa8.35□□□□□ -1.07
EPHA4-204ENST00000415749 BMP6P22004 513 aa8.35□□□□□ -1.07
EPHA4-204ENST00000415749 DUOXA2Q1HG44 320 aa8.35□□□□□ -1.07
EPHA4-204ENST00000415749 NBPF8Q3BBV2 869 aa8.35□□□□□ -1.07
EPHA4-204ENST00000415749 FOXD4L6Q3SYB3 417 aaPredicted RBP8.35□□□□□ -1.07
EPHA4-204ENST00000415749 FOXD4L3Q6VB84 417 aaPredicted RBP8.35□□□□□ -1.07
EPHA4-204ENST00000415749 NRSN2Q9GZP1 204 aa8.35□□□□□ -1.07
EPHA4-204ENST00000415749 OSBPL2Q9H1P3 480 aa8.35□□□□□ -1.07
EPHA4-204ENST00000415749 SPON1Q9HCB6 807 aa8.35□□□□□ -1.07
EPHA4-204ENST00000415749 KRT82Q9NSB4 513 aa8.35□□□□□ -1.07
EPHA4-204ENST00000415749 STK17AQ9UEE5 414 aa8.35□□□□□ -1.07
EPHA4-204ENST00000415749 TM4SF5O14894 197 aa8.34□□□□□ -1.07
EPHA4-204ENST00000415749 KCNQ2O43526 872 aa8.34□□□□□ -1.07
EPHA4-204ENST00000415749 TRIM37O94972 964 aa8.34□□□□□ -1.07
EPHA4-204ENST00000415749 FAM196AQ6ZSG2 479 aa8.34□□□□□ -1.07
EPHA4-204ENST00000415749 WAPLQ7Z5K2 1190 aa8.34□□□□□ -1.07
EPHA4-204ENST00000415749 MCF2L2Q86YR7 1114 aa8.34□□□□□ -1.07
EPHA4-204ENST00000415749 NLGN1Q8N2Q7 840 aa8.34□□□□□ -1.07
EPHA4-204ENST00000415749 PHC3Q8NDX5 983 aa8.34□□□□□ -1.07
EPHA4-204ENST00000415749 KCNB2Q92953 911 aa8.34□□□□□ -1.07
EPHA4-204ENST00000415749 LOC100289279A0A1B0GTE1 492 aa8.33□□□□□ -1.08
EPHA4-204ENST00000415749 DDX3YO15523 660 aaKnown RBP8.33□□□□□ -1.08
EPHA4-204ENST00000415749 ADAM11O75078 769 aa8.33□□□□□ -1.08
EPHA4-204ENST00000415749 LMNB2Q03252 620 aa8.33□□□□□ -1.08
EPHA4-204ENST00000415749 PDE3AQ14432 1141 aa8.33□□□□□ -1.08
EPHA4-204ENST00000415749 BMS1Q14692 1282 aaKnown RBP8.33□□□□□ -1.08
EPHA4-204ENST00000415749 PDZD3Q86UT5 571 aa8.33□□□□□ -1.08
EPHA4-204ENST00000415749 MIR1-1HGQ9H1L0 117 aa8.33□□□□□ -1.08
EPHA4-204ENST00000415749 COPRSQ9NQ92 184 aa8.33□□□□□ -1.08
EPHA4-204ENST00000415749 BTG4Q9NY30 223 aa8.33□□□□□ -1.08
EPHA4-204ENST00000415749 STK26Q9P289 416 aa8.33□□□□□ -1.08
EPHA4-204ENST00000415749 DISP2A7MBM2 1401 aa8.32□□□□□ -1.08
EPHA4-204ENST00000415749 MINDY4BA8MYZ0 360 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms