RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 DDX46Q7L014 1031 aaKnown RBP6.16□□□□□ -1.42
VPS41-205ENST00000414632 METTL16Q86W50 562 aaKnown RBP6.16□□□□□ -1.42
VPS41-205ENST00000414632 NT5DC4Q86YG4 428 aa6.16□□□□□ -1.42
VPS41-205ENST00000414632 ZBTB38Q8NAP3 1195 aaPredicted RBP6.16□□□□□ -1.42
VPS41-205ENST00000414632 CCDC191Q8NCU4 936 aa6.16□□□□□ -1.42
VPS41-205ENST00000414632 C7orf43Q8WVR3 580 aa6.16□□□□□ -1.42
VPS41-205ENST00000414632 CELF1Q92879 486 aaKnown RBP6.16□□□□□ -1.42
VPS41-205ENST00000414632 AIDAQ96BJ3 306 aa6.16□□□□□ -1.42
VPS41-205ENST00000414632 SEC31BQ9NQW1 1179 aa6.16□□□□□ -1.42
VPS41-205ENST00000414632 ZNF277Q9NRM2 450 aaPredicted RBP6.16□□□□□ -1.42
VPS41-205ENST00000414632 RNF123Q5XPI4 1314 aa6.16□□□□□ -1.42
VPS41-205ENST00000414632 OPLAHO14841 1288 aa6.15□□□□□ -1.42
VPS41-205ENST00000414632 RPLP1P05386 114 aaKnown RBP6.15□□□□□ -1.42
VPS41-205ENST00000414632 NEFLP07196 543 aa6.15□□□□□ -1.42
VPS41-205ENST00000414632 LMNB1P20700 586 aa6.15□□□□□ -1.42
VPS41-205ENST00000414632 GPC1P35052 558 aa6.15□□□□□ -1.42
VPS41-205ENST00000414632 PLA2G4AP47712 749 aa6.15□□□□□ -1.42
VPS41-205ENST00000414632 GCKRQ14397 625 aa6.15□□□□□ -1.42
VPS41-205ENST00000414632 C4orf17Q53FE4 359 aa6.15□□□□□ -1.42
VPS41-205ENST00000414632 BEND3Q5T5X7 828 aa6.15□□□□□ -1.42
VPS41-205ENST00000414632 PIK3R5Q8WYR1 880 aa6.15□□□□□ -1.42
VPS41-205ENST00000414632 RNF34Q969K3 372 aa6.15□□□□□ -1.42
VPS41-205ENST00000414632 YTHDC1Q96MU7 727 aaKnown RBP6.15□□□□□ -1.42
VPS41-205ENST00000414632 GPR101Q96P66 508 aaPredicted RBP6.15□□□□□ -1.42
VPS41-205ENST00000414632 CRAMP1Q96RY5 1269 aa6.15□□□□□ -1.42
VPS41-205ENST00000414632 CFHR5Q9BXR6 569 aa6.15□□□□□ -1.42
VPS41-205ENST00000414632 TAOK3Q9H2K8 898 aa6.15□□□□□ -1.42
VPS41-205ENST00000414632 FAM13BQ9NYF5 915 aa6.15□□□□□ -1.42
VPS41-205ENST00000414632 TNNQ9UQP3 1299 aa6.15□□□□□ -1.42
VPS41-205ENST00000414632 ZBED9Q6R2W3 1325 aa6.15□□□□□ -1.43
VPS41-205ENST00000414632 SNED1Q8TER0 1413 aa6.15□□□□□ -1.43
VPS41-205ENST00000414632 A6NHS1 94 aa6.14□□□□□ -1.43
VPS41-205ENST00000414632 TGFBR3LH3BV60 316 aa6.14□□□□□ -1.43
VPS41-205ENST00000414632 PDE8AO60658 829 aa6.14□□□□□ -1.43
VPS41-205ENST00000414632 BCAR3O75815 825 aa6.14□□□□□ -1.43
VPS41-205ENST00000414632 RNF144AP50876 292 aaPredicted RBP6.14□□□□□ -1.43
VPS41-205ENST00000414632 RARSP54136 660 aaKnown RBP6.14□□□□□ -1.43
VPS41-205ENST00000414632 CASP7P55210 303 aa6.14□□□□□ -1.43
VPS41-205ENST00000414632 CTSWP56202 376 aa6.14□□□□□ -1.43
VPS41-205ENST00000414632 FANCCQ00597 558 aa6.14□□□□□ -1.43
VPS41-205ENST00000414632 RAD51AP2Q09MP3 1159 aa6.14□□□□□ -1.43
VPS41-205ENST00000414632 GRAPQ13588 217 aa6.14□□□□□ -1.43
VPS41-205ENST00000414632 SF3B3Q15393 1217 aaKnown RBP6.14□□□□□ -1.43
VPS41-205ENST00000414632 ALDH1L2Q3SY69 923 aa6.14□□□□□ -1.43
VPS41-205ENST00000414632 EPHA10Q5JZY3 1008 aa6.14□□□□□ -1.43
VPS41-205ENST00000414632 CYP4X1Q8N118 509 aa6.14□□□□□ -1.43
VPS41-205ENST00000414632 LINS1Q8NG48 757 aa6.14□□□□□ -1.43
VPS41-205ENST00000414632 GRAPLQ8TC17 118 aaPredicted RBP6.14□□□□□ -1.43
VPS41-205ENST00000414632 RHPN1Q8TCX5 695 aa6.14□□□□□ -1.43
VPS41-205ENST00000414632 FBF1Q8TES7 1133 aa6.14□□□□□ -1.43
VPS41-205ENST00000414632 INSM2Q96T92 566 aaPredicted RBP6.14□□□□□ -1.43
VPS41-205ENST00000414632 GREM2Q9H772 168 aa6.14□□□□□ -1.43
VPS41-205ENST00000414632 METTL5Q9NRN9 209 aaKnown RBP6.14□□□□□ -1.43
VPS41-205ENST00000414632 NOB1Q9ULX3 412 aaKnown RBP6.14□□□□□ -1.43
VPS41-205ENST00000414632 AK5Q9Y6K8 562 aa6.14□□□□□ -1.43
VPS41-205ENST00000414632 CDHR2Q9BYE9 1310 aa6.14□□□□□ -1.43
VPS41-205ENST00000414632 SCN9AQ15858 1988 aa6.13□□□□□ -1.43
VPS41-205ENST00000414632 H7C1W4 665 aa6.13□□□□□ -1.43
VPS41-205ENST00000414632 NBPF7P0C2Y1 421 aaPredicted RBP6.13□□□□□ -1.43
VPS41-205ENST00000414632 SMPD1P17405 629 aa6.13□□□□□ -1.43
VPS41-205ENST00000414632 ZNF76P36508 570 aa6.13□□□□□ -1.43
VPS41-205ENST00000414632 IARSP41252 1262 aaKnown RBP6.13□□□□□ -1.43
VPS41-205ENST00000414632 PHKA2P46019 1235 aa6.13□□□□□ -1.43
VPS41-205ENST00000414632 GPSM2P81274 684 aa6.13□□□□□ -1.43
VPS41-205ENST00000414632 HIF1AQ16665 826 aa6.13□□□□□ -1.43
VPS41-205ENST00000414632 CCDC152Q4G0S7 254 aa6.13□□□□□ -1.43
VPS41-205ENST00000414632 SOGA3Q5TF21 947 aa6.13□□□□□ -1.43
VPS41-205ENST00000414632 MEIOBQ8N635 442 aa6.13□□□□□ -1.43
VPS41-205ENST00000414632 ZNF280CQ8ND82 737 aa6.13□□□□□ -1.43
VPS41-205ENST00000414632 TTLL11Q8NHH1 800 aa6.13□□□□□ -1.43
VPS41-205ENST00000414632 FRAT1Q92837 279 aaPredicted RBP6.13□□□□□ -1.43
VPS41-205ENST00000414632 KLRG1Q96E93 195 aa6.13□□□□□ -1.43
VPS41-205ENST00000414632 SUSD3Q96L08 255 aa6.13□□□□□ -1.43
VPS41-205ENST00000414632 FRMD6Q96NE9 622 aa6.13□□□□□ -1.43
VPS41-205ENST00000414632 TSEN34Q9BSV6 310 aaKnown RBP6.13□□□□□ -1.43
VPS41-205ENST00000414632 SRCIN1Q9C0H9 1055 aa6.13□□□□□ -1.43
VPS41-205ENST00000414632 DNAJC25Q9H1X3 360 aa6.13□□□□□ -1.43
VPS41-205ENST00000414632 NMRK2Q9NPI5 230 aa6.13□□□□□ -1.43
VPS41-205ENST00000414632 C9orf78Q9NZ63 289 aaPredicted RBP6.13□□□□□ -1.43
VPS41-205ENST00000414632 DMGDHQ9UI17 866 aaKnown RBP6.13□□□□□ -1.43
VPS41-205ENST00000414632 ATP6V0A2Q9Y487 856 aa6.13□□□□□ -1.43
VPS41-205ENST00000414632 PTPRCP08575 1304 aa6.13□□□□□ -1.43
VPS41-205ENST00000414632 ZNF541Q9H0D2 1346 aa6.13□□□□□ -1.43
VPS41-205ENST00000414632 WDR90Q96KV7 1748 aa6.13□□□□□ -1.43
VPS41-205ENST00000414632 ZNF646O15015 1829 aaPredicted RBP6.13□□□□□ -1.43
VPS41-205ENST00000414632 PSME4Q14997 1843 aa6.13□□□□□ -1.43
VPS41-205ENST00000414632 WTIPA6NIX2 430 aaPredicted RBP6.12□□□□□ -1.43
VPS41-205ENST00000414632 GRM8O00222 908 aa6.12□□□□□ -1.43
VPS41-205ENST00000414632 PPIP5K2O43314 1243 aa6.12□□□□□ -1.43
VPS41-205ENST00000414632 GDF9O60383 454 aa6.12□□□□□ -1.43
VPS41-205ENST00000414632 CPNE3O75131 537 aaKnown RBP6.12□□□□□ -1.43
VPS41-205ENST00000414632 BBOX1O75936 387 aa6.12□□□□□ -1.43
VPS41-205ENST00000414632 SCN4AP35499 1836 aa6.12□□□□□ -1.43
VPS41-205ENST00000414632 RPS8P62241 208 aaKnown RBP6.12□□□□□ -1.43
VPS41-205ENST00000414632 FOXO4P98177 505 aa6.12□□□□□ -1.43
VPS41-205ENST00000414632 AOC3Q16853 763 aa6.12□□□□□ -1.43
VPS41-205ENST00000414632 DPP8Q6V1X1 898 aaPredicted RBP6.12□□□□□ -1.43
VPS41-205ENST00000414632 SP8Q8IXZ3 490 aa6.12□□□□□ -1.43
VPS41-205ENST00000414632 RTKN2Q8IZC4 609 aa6.12□□□□□ -1.43
VPS41-205ENST00000414632 SUCLG2Q96I99 432 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms