RNA–Protein interactions for RNA: ENST00000414368.2

LINC00343-201, long intergenic non-protein coding RNA 343, humanhuman

TSL 2

Gene LINC00343, Length 864 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-201ENST00000414368 TMEM229AB2RXF0 380 aa8.51□□□□□ -1.05
LINC00343-201ENST00000414368 PATL2C9JE40 543 aaKnown RBP8.51□□□□□ -1.05
LINC00343-201ENST00000414368 M0R2N6 131 aa8.51□□□□□ -1.05
LINC00343-201ENST00000414368 NFKBIEO00221 500 aa8.51□□□□□ -1.05
LINC00343-201ENST00000414368 MEN1O00255 615 aa8.51□□□□□ -1.05
LINC00343-201ENST00000414368 STAU1O95793 577 aaKnown RBP8.51□□□□□ -1.05
LINC00343-201ENST00000414368 IGHMBP2P38935 993 aaKnown RBP8.51□□□□□ -1.05
LINC00343-201ENST00000414368 PTGIRP43119 386 aa8.51□□□□□ -1.05
LINC00343-201ENST00000414368 RFX5P48382 616 aaPredicted RBP8.51□□□□□ -1.05
LINC00343-201ENST00000414368 SCNN1DP51172 638 aa8.51□□□□□ -1.05
LINC00343-201ENST00000414368 GPSM2P81274 684 aa8.51□□□□□ -1.05
LINC00343-201ENST00000414368 CCDC93Q567U6 631 aa8.51□□□□□ -1.05
LINC00343-201ENST00000414368 TAF7LQ5H9L4 462 aa8.51□□□□□ -1.05
LINC00343-201ENST00000414368 AGBL1Q96MI9 1066 aa8.51□□□□□ -1.05
LINC00343-201ENST00000414368 BSDC1Q9NW68 430 aaPredicted RBP8.51□□□□□ -1.05
LINC00343-201ENST00000414368 MINPP1Q9UNW1 487 aa8.51□□□□□ -1.05
LINC00343-201ENST00000414368 NSFL1CQ9UNZ2 370 aaKnown RBP8.51□□□□□ -1.05
LINC00343-201ENST00000414368 PA2G4Q9UQ80 394 aaKnown RBP8.51□□□□□ -1.05
LINC00343-201ENST00000414368 HDAC5Q9UQL6 1122 aa8.51□□□□□ -1.05
LINC00343-201ENST00000414368 LRRC37AA6NMS7 1700 aa8.51□□□□□ -1.05
LINC00343-201ENST00000414368 SRGAP3O43295 1099 aa8.5□□□□□ -1.05
LINC00343-201ENST00000414368 PRMT3O60678 531 aa8.5□□□□□ -1.05
LINC00343-201ENST00000414368 ATP2B4P23634 1241 aa8.5□□□□□ -1.05
LINC00343-201ENST00000414368 PTPN12Q05209 780 aaKnown RBP8.5□□□□□ -1.05
LINC00343-201ENST00000414368 LRRC24Q50LG9 513 aa8.5□□□□□ -1.05
LINC00343-201ENST00000414368 LDHAL6AQ6ZMR3 332 aa8.5□□□□□ -1.05
LINC00343-201ENST00000414368 RTKN2Q8IZC4 609 aa8.5□□□□□ -1.05
LINC00343-201ENST00000414368 SNED1Q8TER0 1413 aa8.5□□□□□ -1.05
LINC00343-201ENST00000414368 GPR101Q96P66 508 aaPredicted RBP8.5□□□□□ -1.05
LINC00343-201ENST00000414368 MPHOSPH8Q99549 860 aa8.5□□□□□ -1.05
LINC00343-201ENST00000414368 SIL1Q9H173 461 aa8.5□□□□□ -1.05
LINC00343-201ENST00000414368 TMX4Q9H1E5 349 aaPredicted RBP8.5□□□□□ -1.05
LINC00343-201ENST00000414368 ZNF277Q9NRM2 450 aaPredicted RBP8.5□□□□□ -1.05
LINC00343-201ENST00000414368 CNNM1Q9NRU3 951 aa8.5□□□□□ -1.05
LINC00343-201ENST00000414368 A0A1B0GUL6 1792 aa8.49□□□□□ -1.05
LINC00343-201ENST00000414368 A0A1W2PRU2 124 aa8.49□□□□□ -1.05
LINC00343-201ENST00000414368 SNAP23O00161 211 aa8.49□□□□□ -1.05
LINC00343-201ENST00000414368 LGR5O75473 907 aa8.49□□□□□ -1.05
LINC00343-201ENST00000414368 TAF5LO75529 589 aa8.49□□□□□ -1.05
LINC00343-201ENST00000414368 ATP8B2P98198 1209 aa8.49□□□□□ -1.05
LINC00343-201ENST00000414368 FKBP4Q02790 459 aaKnown RBP eCLIP8.49□□□□□ -1.05
LINC00343-201ENST00000414368 CHRNDQ07001 517 aa8.49□□□□□ -1.05
LINC00343-201ENST00000414368 MTX1Q13505 466 aa8.49□□□□□ -1.05
LINC00343-201ENST00000414368 SOGA3Q5TF21 947 aa8.49□□□□□ -1.05
LINC00343-201ENST00000414368 CEP85Q6P2H3 762 aa8.49□□□□□ -1.05
LINC00343-201ENST00000414368 DPP8Q6V1X1 898 aaPredicted RBP8.49□□□□□ -1.05
LINC00343-201ENST00000414368 TMC4Q7Z404 712 aa8.49□□□□□ -1.05
LINC00343-201ENST00000414368 SIRT2Q8IXJ6 389 aa8.49□□□□□ -1.05
LINC00343-201ENST00000414368 MEIOBQ8N635 442 aa8.49□□□□□ -1.05
LINC00343-201ENST00000414368 EXOC6Q8TAG9 804 aa8.49□□□□□ -1.05
LINC00343-201ENST00000414368 TAOK3Q9H2K8 898 aa8.49□□□□□ -1.05
LINC00343-201ENST00000414368 ANKIB1Q9P2G1 1089 aa8.49□□□□□ -1.05
LINC00343-201ENST00000414368 POLLQ9UGP5 575 aa8.49□□□□□ -1.05
LINC00343-201ENST00000414368 RIPOR2Q9Y4F9 1068 aa8.49□□□□□ -1.05
LINC00343-201ENST00000414368 LTBP1Q14766 1721 aa8.49□□□□□ -1.05
LINC00343-201ENST00000414368 DICER1Q9UPY3 1922 aaKnown RBP8.48□□□□□ -1.05
LINC00343-201ENST00000414368 DUOX1Q9NRD9 1551 aa8.48□□□□□ -1.05
LINC00343-201ENST00000414368 TTLL8A6PVC2 850 aa8.48□□□□□ -1.05
LINC00343-201ENST00000414368 SRSF11Q05519 484 aaKnown RBP8.48□□□□□ -1.05
LINC00343-201ENST00000414368 KCNA1Q09470 495 aa8.48□□□□□ -1.05
LINC00343-201ENST00000414368 CLN3Q13286 438 aa8.48□□□□□ -1.05
LINC00343-201ENST00000414368 TLR1Q15399 786 aa8.48□□□□□ -1.05
LINC00343-201ENST00000414368 C9orf131Q5VYM1 1079 aa8.48□□□□□ -1.05
LINC00343-201ENST00000414368 ATG9AQ7Z3C6 839 aa8.48□□□□□ -1.05
LINC00343-201ENST00000414368 TNS4Q8IZW8 715 aa8.48□□□□□ -1.05
LINC00343-201ENST00000414368 TBC1D16Q8TBP0 767 aa8.48□□□□□ -1.05
LINC00343-201ENST00000414368 PRIMPOLQ96LW4 560 aa8.48□□□□□ -1.05
LINC00343-201ENST00000414368 ESYT1Q9BSJ8 1104 aa8.48□□□□□ -1.05
LINC00343-201ENST00000414368 TSEN34Q9BSV6 310 aaKnown RBP8.48□□□□□ -1.05
LINC00343-201ENST00000414368 ZNF395Q9H8N7 513 aaPredicted RBP8.48□□□□□ -1.05
LINC00343-201ENST00000414368 COL4A5P29400 1685 aa8.47□□□□□ -1.05
LINC00343-201ENST00000414368 EYA2O00167 538 aa8.47□□□□□ -1.05
LINC00343-201ENST00000414368 UFL1O94874 794 aa8.47□□□□□ -1.05
LINC00343-201ENST00000414368 IL2RAP01589 272 aa8.47□□□□□ -1.05
LINC00343-201ENST00000414368 LMNB1P20700 586 aa8.47□□□□□ -1.05
LINC00343-201ENST00000414368 KLRK1P26718 216 aa8.47□□□□□ -1.05
LINC00343-201ENST00000414368 IARSP41252 1262 aaKnown RBP8.47□□□□□ -1.05
LINC00343-201ENST00000414368 AOC3Q16853 763 aa8.47□□□□□ -1.05
LINC00343-201ENST00000414368 SSH3Q8TE77 659 aa8.47□□□□□ -1.05
LINC00343-201ENST00000414368 XAGE2Q96GT9 111 aa8.47□□□□□ -1.05
LINC00343-201ENST00000414368 PSMD1Q99460 953 aa8.47□□□□□ -1.05
LINC00343-201ENST00000414368 RTFDC1Q9BY42 306 aaPredicted RBP8.47□□□□□ -1.05
LINC00343-201ENST00000414368 CHMP4BQ9H444 224 aaKnown RBP8.47□□□□□ -1.05
LINC00343-201ENST00000414368 COPRSQ9NQ92 184 aa8.47□□□□□ -1.05
LINC00343-201ENST00000414368 PODXL2Q9NZ53 605 aa8.47□□□□□ -1.05
LINC00343-201ENST00000414368 RNF181Q9P0P0 153 aa8.47□□□□□ -1.05
LINC00343-201ENST00000414368 GGA1Q9UJY5 639 aa8.47□□□□□ -1.05
LINC00343-201ENST00000414368 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.47□□□□□ -1.05
LINC00343-201ENST00000414368 XDHP47989 1333 aa8.47□□□□□ -1.05
LINC00343-201ENST00000414368 LTBP3Q9NS15 1303 aa8.47□□□□□ -1.05
LINC00343-201ENST00000414368 FIGNL2A6NMB9 653 aa8.46□□□□□ -1.06
LINC00343-201ENST00000414368 PPIP5K2O43314 1243 aa8.46□□□□□ -1.06
LINC00343-201ENST00000414368 CENPBP07199 599 aaPredicted RBP8.46□□□□□ -1.06
LINC00343-201ENST00000414368 SMTNP53814 917 aa8.46□□□□□ -1.06
LINC00343-201ENST00000414368 METTL24Q5JXM2 366 aa8.46□□□□□ -1.06
LINC00343-201ENST00000414368 TXNRD3Q86VQ6 643 aa8.46□□□□□ -1.06
LINC00343-201ENST00000414368 RPAP2Q8IXW5 612 aaPredicted RBP8.46□□□□□ -1.06
LINC00343-201ENST00000414368 ANKRD2Q9GZV1 360 aa8.46□□□□□ -1.06
LINC00343-201ENST00000414368 ZNF804BA4D1E1 1349 aa8.46□□□□□ -1.06
LINC00343-201ENST00000414368 A6NJY4 79 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms