RNA–Protein interactions for RNA: ENST00000411917.1

PTPA-208, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 3

Gene PTPA, Length 738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-208ENST00000411917 CALM2P0DP24 149 aa23.71■■□□□ 1.39
PTPA-208ENST00000411917 CALM3P0DP25 149 aa23.71■■□□□ 1.39
PTPA-208ENST00000411917 GUCY1A2P33402 732 aa23.71■■□□□ 1.39
PTPA-208ENST00000411917 TCEANC2Q96MN5 208 aa23.71■■□□□ 1.39
PTPA-208ENST00000411917 GLIS2Q9BZE0 524 aaPredicted RBP23.71■■□□□ 1.39
PTPA-208ENST00000411917 ZBTB21Q9ULJ3 1066 aa23.71■■□□□ 1.39
PTPA-208ENST00000411917 SCAF8Q9UPN6 1271 aaKnown RBP23.71■■□□□ 1.39
PTPA-208ENST00000411917 TOP1P11387 765 aaKnown RBP23.7■■□□□ 1.38
PTPA-208ENST00000411917 RRP1BQ14684 758 aaKnown RBP23.7■■□□□ 1.38
PTPA-208ENST00000411917 APOA5Q6Q788 366 aa23.7■■□□□ 1.38
PTPA-208ENST00000411917 SCYL3Q8IZE3 742 aa23.7■■□□□ 1.38
PTPA-208ENST00000411917 LRRC2Q9BYS8 371 aa23.7■■□□□ 1.38
PTPA-208ENST00000411917 PAPPA2Q9BXP8 1791 aa23.7■■□□□ 1.38
PTPA-208ENST00000411917 POLR2AP24928 1970 aaKnown RBP23.69■■□□□ 1.38
PTPA-208ENST00000411917 CCDC69A6NI79 296 aa23.69■■□□□ 1.38
PTPA-208ENST00000411917 USP2O75604 605 aaPredicted RBP23.69■■□□□ 1.38
PTPA-208ENST00000411917 GH2P01242 217 aa23.69■■□□□ 1.38
PTPA-208ENST00000411917 IREB2P48200 963 aaKnown RBP23.69■■□□□ 1.38
PTPA-208ENST00000411917 CUL4AQ13619 759 aa23.69■■□□□ 1.38
PTPA-208ENST00000411917 TMX3Q96JJ7 454 aa23.69■■□□□ 1.38
PTPA-208ENST00000411917 TPCN1Q9ULQ1 816 aa23.69■■□□□ 1.38
PTPA-208ENST00000411917 SLC12A7Q9Y666 1083 aa23.69■■□□□ 1.38
PTPA-208ENST00000411917 PFKFB2O60825 505 aa23.68■■□□□ 1.38
PTPA-208ENST00000411917 SLURP2P0DP57 97 aa23.68■■□□□ 1.38
PTPA-208ENST00000411917 MAP1SQ66K74 1059 aaPredicted RBP23.68■■□□□ 1.38
PTPA-208ENST00000411917 SYNE3Q6ZMZ3 975 aa23.68■■□□□ 1.38
PTPA-208ENST00000411917 CATIPQ7Z7H3 387 aa23.68■■□□□ 1.38
PTPA-208ENST00000411917 INTS4Q96HW7 963 aaKnown RBP23.68■■□□□ 1.38
PTPA-208ENST00000411917 WRNIP1Q96S55 665 aa23.68■■□□□ 1.38
PTPA-208ENST00000411917 ZKSCAN3Q9BRR0 538 aa23.68■■□□□ 1.38
PTPA-208ENST00000411917 SH2D4AQ9H788 454 aa23.68■■□□□ 1.38
PTPA-208ENST00000411917 KLF18A0A0U1RQI7 1052 aa23.67■■□□□ 1.38
PTPA-208ENST00000411917 MPHOSPH10O00566 681 aaKnown RBP23.67■■□□□ 1.38
PTPA-208ENST00000411917 KIF3CO14782 793 aa23.67■■□□□ 1.38
PTPA-208ENST00000411917 NMT2O60551 498 aa23.67■■□□□ 1.38
PTPA-208ENST00000411917 GDF11O95390 407 aa23.67■■□□□ 1.38
PTPA-208ENST00000411917 PDIA3P30101 505 aaKnown RBP23.67■■□□□ 1.38
PTPA-208ENST00000411917 MAP3K9P80192 1104 aa23.67■■□□□ 1.38
PTPA-208ENST00000411917 ICA1Q05084 483 aa23.67■■□□□ 1.38
PTPA-208ENST00000411917 TROAPQ12815 778 aa23.67■■□□□ 1.38
PTPA-208ENST00000411917 PRAMEF18Q5VWM3 479 aa23.67■■□□□ 1.38
PTPA-208ENST00000411917 GMCL1P1Q8NEA9 526 aa23.67■■□□□ 1.38
PTPA-208ENST00000411917 TMEM47Q9BQJ4 181 aa23.67■■□□□ 1.38
PTPA-208ENST00000411917 WDR18Q9BV38 432 aa23.67■■□□□ 1.38
PTPA-208ENST00000411917 KAT14Q9H8E8 782 aa23.67■■□□□ 1.38
PTPA-208ENST00000411917 BRPF3Q9ULD4 1205 aa23.67■■□□□ 1.38
PTPA-208ENST00000411917 ITGBL1O95965 494 aaPredicted RBP23.66■■□□□ 1.38
PTPA-208ENST00000411917 APOBRQ0VD83 1088 aa23.66■■□□□ 1.38
PTPA-208ENST00000411917 SEPT2Q15019 361 aa23.66■■□□□ 1.38
PTPA-208ENST00000411917 ME3Q16798 604 aa23.66■■□□□ 1.38
PTPA-208ENST00000411917 NFXL1Q6ZNB6 911 aa23.66■■□□□ 1.38
PTPA-208ENST00000411917 ARMC9Q7Z3E5 817 aa23.66■■□□□ 1.38
PTPA-208ENST00000411917 ZNF654Q8IZM8 581 aa23.66■■□□□ 1.38
PTPA-208ENST00000411917 ARHGEF10LQ9HCE6 1279 aa23.66■■□□□ 1.38
PTPA-208ENST00000411917 GPHNQ9NQX3 736 aaPredicted RBP23.66■■□□□ 1.38
PTPA-208ENST00000411917 STX8Q9UNK0 236 aa23.66■■□□□ 1.38
PTPA-208ENST00000411917 CCDC196A0A1B0GTZ2 297 aa23.65■■□□□ 1.38
PTPA-208ENST00000411917 ZBTB43O43298 467 aa23.65■■□□□ 1.38
PTPA-208ENST00000411917 DHX16O60231 1041 aaKnown RBP23.65■■□□□ 1.38
PTPA-208ENST00000411917 SNHG28P0DPA3 235 aa23.65■■□□□ 1.38
PTPA-208ENST00000411917 JAG1P78504 1218 aa23.65■■□□□ 1.38
PTPA-208ENST00000411917 SIAH1Q8IUQ4 282 aa23.65■■□□□ 1.38
PTPA-208ENST00000411917 ANKRD13AQ8IZ07 590 aa23.65■■□□□ 1.38
PTPA-208ENST00000411917 PNMA1Q8ND90 353 aa23.65■■□□□ 1.38
PTPA-208ENST00000411917 RBM46Q8TBY0 533 aaKnown RBP23.65■■□□□ 1.38
PTPA-208ENST00000411917 ZNF526Q8TF50 670 aaPredicted RBP23.65■■□□□ 1.38
PTPA-208ENST00000411917 GTF3C6Q969F1 213 aa23.65■■□□□ 1.38
PTPA-208ENST00000411917 HPS5Q9UPZ3 1129 aa23.65■■□□□ 1.38
PTPA-208ENST00000411917 DOCK1Q14185 1865 aa23.64■■□□□ 1.38
PTPA-208ENST00000411917 USP17L5A8MUK1 530 aa23.64■■□□□ 1.37
PTPA-208ENST00000411917 LDLRAD1Q5T700 205 aa23.64■■□□□ 1.37
PTPA-208ENST00000411917 IPO9Q96P70 1041 aaKnown RBP23.64■■□□□ 1.37
PTPA-208ENST00000411917 LLPHQ9BRT6 129 aaKnown RBP23.64■■□□□ 1.37
PTPA-208ENST00000411917 SLKQ9H2G2 1235 aaPredicted RBP23.64■■□□□ 1.37
PTPA-208ENST00000411917 AS3MTQ9HBK9 375 aa23.64■■□□□ 1.37
PTPA-208ENST00000411917 SENP2Q9HC62 589 aa23.64■■□□□ 1.37
PTPA-208ENST00000411917 PICK1Q9NRD5 415 aa23.64■■□□□ 1.37
PTPA-208ENST00000411917 RBM28Q9NW13 759 aaKnown RBP23.64■■□□□ 1.37
PTPA-208ENST00000411917 TMX2Q9Y320 296 aa23.64■■□□□ 1.37
PTPA-208ENST00000411917 GOLGA8BA8MQT2 603 aa23.63■■□□□ 1.37
PTPA-208ENST00000411917 EEF2P13639 858 aaKnown RBP23.63■■□□□ 1.37
PTPA-208ENST00000411917 INPP5BP32019 993 aa23.63■■□□□ 1.37
PTPA-208ENST00000411917 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.63■■□□□ 1.37
PTPA-208ENST00000411917 SMC1BQ8NDV3 1235 aa23.63■■□□□ 1.37
PTPA-208ENST00000411917 CLIP2Q9UDT6 1046 aa23.63■■□□□ 1.37
PTPA-208ENST00000411917 CSADQ9Y600 493 aa23.63■■□□□ 1.37
PTPA-208ENST00000411917 PASKQ96RG2 1323 aa23.62■■□□□ 1.37
PTPA-208ENST00000411917 PTPRAP18433 802 aa23.62■■□□□ 1.37
PTPA-208ENST00000411917 KIF5BP33176 963 aa23.62■■□□□ 1.37
PTPA-208ENST00000411917 METAP2P50579 478 aaKnown RBP eCLIP23.62■■□□□ 1.37
PTPA-208ENST00000411917 RAB3GAP1Q15042 981 aa23.62■■□□□ 1.37
PTPA-208ENST00000411917 SMARCA1P28370 1054 aa23.61■■□□□ 1.37
PTPA-208ENST00000411917 GNAQP50148 359 aa23.61■■□□□ 1.37
PTPA-208ENST00000411917 FANCBQ8NB91 859 aa23.61■■□□□ 1.37
PTPA-208ENST00000411917 GMCL1Q96IK5 515 aa23.61■■□□□ 1.37
PTPA-208ENST00000411917 KIAA1683Q9H0B3 1180 aa23.61■■□□□ 1.37
PTPA-208ENST00000411917 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.61■■□□□ 1.37
PTPA-208ENST00000411917 SNCAIPQ9Y6H5 919 aa23.61■■□□□ 1.37
PTPA-208ENST00000411917 TOMM70O94826 608 aa23.6■■□□□ 1.37
PTPA-208ENST00000411917 LARGE1O95461 756 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms