RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 ETAA1Q9NY74 926 aa6.55□□□□□ -1.36
R3HDM1-202ENST00000409478 SYNRGQ9UMZ2 1314 aa6.55□□□□□ -1.36
R3HDM1-202ENST00000409478 SLIT1O75093 1534 aa6.55□□□□□ -1.36
R3HDM1-202ENST00000409478 PPP1R37O75864 691 aa6.55□□□□□ -1.36
R3HDM1-202ENST00000409478 CDKL5O76039 1030 aa6.55□□□□□ -1.36
R3HDM1-202ENST00000409478 TNFRSF8P28908 595 aa6.55□□□□□ -1.36
R3HDM1-202ENST00000409478 GCKP35557 465 aa6.55□□□□□ -1.36
R3HDM1-202ENST00000409478 KRT83P78385 493 aa6.55□□□□□ -1.36
R3HDM1-202ENST00000409478 SLMAPQ14BN4 828 aa6.55□□□□□ -1.36
R3HDM1-202ENST00000409478 PTGISQ16647 500 aa6.55□□□□□ -1.36
R3HDM1-202ENST00000409478 TTMPQ5BVD1 217 aa6.55□□□□□ -1.36
R3HDM1-202ENST00000409478 NLRP14Q86W24 1093 aa6.55□□□□□ -1.36
R3HDM1-202ENST00000409478 GSPT2Q8IYD1 628 aaKnown RBP6.55□□□□□ -1.36
R3HDM1-202ENST00000409478 FUKQ8N0W3 1084 aa6.55□□□□□ -1.36
R3HDM1-202ENST00000409478 C1orf131Q8NDD1 294 aaKnown RBP6.55□□□□□ -1.36
R3HDM1-202ENST00000409478 IL17REQ8NFR9 667 aa6.55□□□□□ -1.36
R3HDM1-202ENST00000409478 NUP88Q99567 741 aaPredicted RBP6.55□□□□□ -1.36
R3HDM1-202ENST00000409478 HAUS7Q99871 368 aa6.55□□□□□ -1.36
R3HDM1-202ENST00000409478 HOMER3Q9NSC5 361 aa6.55□□□□□ -1.36
R3HDM1-202ENST00000409478 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.55□□□□□ -1.36
R3HDM1-202ENST00000409478 EID1Q9Y6B2 187 aa6.55□□□□□ -1.36
R3HDM1-202ENST00000409478 A2ML1A8K2U0 1454 aa6.55□□□□□ -1.36
R3HDM1-202ENST00000409478 GOLGA8BA8MQT2 603 aa6.55□□□□□ -1.36
R3HDM1-202ENST00000409478 KRT86O43790 486 aa6.55□□□□□ -1.36
R3HDM1-202ENST00000409478 ZMYND10O75800 440 aa6.55□□□□□ -1.36
R3HDM1-202ENST00000409478 NDUFA10O95299 355 aa6.55□□□□□ -1.36
R3HDM1-202ENST00000409478 ATP1A1P05023 1023 aaKnown RBP6.55□□□□□ -1.36
R3HDM1-202ENST00000409478 PIP4K2AP48426 406 aaPredicted RBP6.55□□□□□ -1.36
R3HDM1-202ENST00000409478 FXR1P51114 621 aaKnown RBP eCLIP6.55□□□□□ -1.36
R3HDM1-202ENST00000409478 CDKAL1Q5VV42 579 aa6.55□□□□□ -1.36
R3HDM1-202ENST00000409478 VPS37DQ86XT2 251 aa6.55□□□□□ -1.36
R3HDM1-202ENST00000409478 FNBP4Q8N3X1 1017 aaPredicted RBP6.55□□□□□ -1.36
R3HDM1-202ENST00000409478 EYA1Q99502 592 aa6.55□□□□□ -1.36
R3HDM1-202ENST00000409478 SLF1Q9BQI6 1058 aa6.55□□□□□ -1.36
R3HDM1-202ENST00000409478 EPN1Q9Y6I3 576 aaPredicted RBP6.55□□□□□ -1.36
R3HDM1-202ENST00000409478 PALLDQ8WX93 1383 aa6.55□□□□□ -1.36
R3HDM1-202ENST00000409478 GRM8O00222 908 aa6.54□□□□□ -1.36
R3HDM1-202ENST00000409478 CCNHP51946 323 aaPredicted RBP6.54□□□□□ -1.36
R3HDM1-202ENST00000409478 RWDD2BP57060 319 aa6.54□□□□□ -1.36
R3HDM1-202ENST00000409478 SPECC1Q5M775 1068 aa6.54□□□□□ -1.36
R3HDM1-202ENST00000409478 C6orf89Q6UWU4 347 aa6.54□□□□□ -1.36
R3HDM1-202ENST00000409478 KSR2Q6VAB6 950 aa6.54□□□□□ -1.36
R3HDM1-202ENST00000409478 KBTBD3Q8NAB2 608 aa6.54□□□□□ -1.36
R3HDM1-202ENST00000409478 MYCBPAPQ8TBZ2 947 aa6.54□□□□□ -1.36
R3HDM1-202ENST00000409478 EDC3Q96F86 508 aaKnown RBP6.54□□□□□ -1.36
R3HDM1-202ENST00000409478 CAPZA3Q96KX2 299 aa6.54□□□□□ -1.36
R3HDM1-202ENST00000409478 SCLT1Q96NL6 688 aa6.54□□□□□ -1.36
R3HDM1-202ENST00000409478 CCT8L2Q96SF2 557 aa6.54□□□□□ -1.36
R3HDM1-202ENST00000409478 DBF4Q9UBU7 674 aaPredicted RBP6.54□□□□□ -1.36
R3HDM1-202ENST00000409478 IQSEC3Q9UPP2 1182 aaPredicted RBP6.54□□□□□ -1.36
R3HDM1-202ENST00000409478 MAP3K2Q9Y2U5 619 aa6.54□□□□□ -1.36
R3HDM1-202ENST00000409478 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.54□□□□□ -1.36
R3HDM1-202ENST00000409478 ENC1O14682 589 aa6.54□□□□□ -1.36
R3HDM1-202ENST00000409478 ABL1P00519 1130 aa6.54□□□□□ -1.36
R3HDM1-202ENST00000409478 EIF4A1P60842 406 aaKnown RBP6.54□□□□□ -1.36
R3HDM1-202ENST00000409478 SPAG1Q07617 926 aa6.54□□□□□ -1.36
R3HDM1-202ENST00000409478 IFT88Q13099 833 aa6.54□□□□□ -1.36
R3HDM1-202ENST00000409478 DIP2AQ14689 1571 aa6.54□□□□□ -1.36
R3HDM1-202ENST00000409478 RBBP5Q15291 538 aaKnown RBP6.54□□□□□ -1.36
R3HDM1-202ENST00000409478 ARMC9Q7Z3E5 817 aa6.54□□□□□ -1.36
R3HDM1-202ENST00000409478 ZNF572Q7Z3I7 529 aaPredicted RBP6.54□□□□□ -1.36
R3HDM1-202ENST00000409478 SPATA20Q8TB22 786 aa6.54□□□□□ -1.36
R3HDM1-202ENST00000409478 SUCLG2Q96I99 432 aa6.54□□□□□ -1.36
R3HDM1-202ENST00000409478 HDAC6Q9UBN7 1215 aa6.54□□□□□ -1.36
R3HDM1-202ENST00000409478 KLF18A0A0U1RQI7 1052 aa6.54□□□□□ -1.36
R3HDM1-202ENST00000409478 ANKRD18BA2A2Z9 1011 aa6.54□□□□□ -1.36
R3HDM1-202ENST00000409478 IRF6O14896 467 aa6.54□□□□□ -1.36
R3HDM1-202ENST00000409478 WASHC4Q2M389 1173 aa6.54□□□□□ -1.36
R3HDM1-202ENST00000409478 CCDC122Q5T0U0 273 aa6.54□□□□□ -1.36
R3HDM1-202ENST00000409478 ARFGAP2Q8N6H7 521 aa6.54□□□□□ -1.36
R3HDM1-202ENST00000409478 TATDN2Q93075 761 aa6.54□□□□□ -1.36
R3HDM1-202ENST00000409478 FAM210AQ96ND0 272 aa6.54□□□□□ -1.36
R3HDM1-202ENST00000409478 WDR19Q8NEZ3 1342 aa6.53□□□□□ -1.36
R3HDM1-202ENST00000409478 FOXN1O15353 648 aa6.53□□□□□ -1.36
R3HDM1-202ENST00000409478 PDHBP11177 359 aa6.53□□□□□ -1.36
R3HDM1-202ENST00000409478 NR1D1P20393 614 aa6.53□□□□□ -1.36
R3HDM1-202ENST00000409478 INHBEP58166 350 aa6.53□□□□□ -1.36
R3HDM1-202ENST00000409478 TRIM29Q14134 588 aa6.53□□□□□ -1.36
R3HDM1-202ENST00000409478 TSR1Q2NL82 804 aaKnown RBP6.53□□□□□ -1.36
R3HDM1-202ENST00000409478 TNNI3KQ59H18 835 aa6.53□□□□□ -1.36
R3HDM1-202ENST00000409478 PPP4R3AQ6IN85 833 aa6.53□□□□□ -1.36
R3HDM1-202ENST00000409478 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.53□□□□□ -1.36
R3HDM1-202ENST00000409478 CD302Q8IX05 232 aa6.53□□□□□ -1.36
R3HDM1-202ENST00000409478 ZNF579Q8NAF0 562 aaKnown RBP6.53□□□□□ -1.36
R3HDM1-202ENST00000409478 LINS1Q8NG48 757 aa6.53□□□□□ -1.36
R3HDM1-202ENST00000409478 TCP11Q8WWU5 503 aa6.53□□□□□ -1.36
R3HDM1-202ENST00000409478 ARL8AQ96BM9 186 aa6.53□□□□□ -1.36
R3HDM1-202ENST00000409478 SAAL1Q96ER3 474 aa6.53□□□□□ -1.36
R3HDM1-202ENST00000409478 RNPC3Q96LT9 517 aaKnown RBP6.53□□□□□ -1.36
R3HDM1-202ENST00000409478 MED15Q96RN5 788 aa6.53□□□□□ -1.36
R3HDM1-202ENST00000409478 ALG1Q9BT22 464 aa6.53□□□□□ -1.36
R3HDM1-202ENST00000409478 TPX2Q9ULW0 747 aaKnown RBP6.53□□□□□ -1.36
R3HDM1-202ENST00000409478 FPGT-TNNI3KV9GXZ4 949 aa6.53□□□□□ -1.36
R3HDM1-202ENST00000409478 HMGB1P1B2RPK0 211 aaPredicted RBP6.53□□□□□ -1.36
R3HDM1-202ENST00000409478 SRGAP2O75044 1071 aa6.53□□□□□ -1.36
R3HDM1-202ENST00000409478 HSPD1P10809 573 aaKnown RBP6.53□□□□□ -1.36
R3HDM1-202ENST00000409478 MDH1P40925 334 aaKnown RBP6.53□□□□□ -1.36
R3HDM1-202ENST00000409478 ATP1A2P50993 1020 aa6.53□□□□□ -1.36
R3HDM1-202ENST00000409478 CCHCR1Q8TD31 782 aa6.53□□□□□ -1.36
R3HDM1-202ENST00000409478 ITFG2Q969R8 447 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms