RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 GOLIM4O00461 696 aa12.06□□□□□ -0.48
NIF3L1-204ENST00000409357 SLC27A2O14975 620 aa12.06□□□□□ -0.48
NIF3L1-204ENST00000409357 SYF2O95926 243 aaKnown RBP12.06□□□□□ -0.48
NIF3L1-204ENST00000409357 INPP5BP32019 993 aa12.06□□□□□ -0.48
NIF3L1-204ENST00000409357 CWC27Q6UX04 472 aaKnown RBP12.06□□□□□ -0.48
NIF3L1-204ENST00000409357 EP400NLQ6ZTU2 488 aa12.06□□□□□ -0.48
NIF3L1-204ENST00000409357 ANKRD18AQ8IVF6 992 aa12.06□□□□□ -0.48
NIF3L1-204ENST00000409357 CCDC50Q8IVM0 306 aa12.06□□□□□ -0.48
NIF3L1-204ENST00000409357 TEX11Q8IYF3 940 aa12.06□□□□□ -0.48
NIF3L1-204ENST00000409357 RUBCNQ92622 972 aa12.06□□□□□ -0.48
NIF3L1-204ENST00000409357 BRF1Q92994 677 aa12.06□□□□□ -0.48
NIF3L1-204ENST00000409357 FAXDC2Q96IV6 333 aa12.06□□□□□ -0.48
NIF3L1-204ENST00000409357 EPC1Q9H2F5 836 aa12.06□□□□□ -0.48
NIF3L1-204ENST00000409357 VEZTQ9HBM0 779 aa12.06□□□□□ -0.48
NIF3L1-204ENST00000409357 RNF181Q9P0P0 153 aa12.06□□□□□ -0.48
NIF3L1-204ENST00000409357 TUBE1Q9UJT0 475 aa12.06□□□□□ -0.48
NIF3L1-204ENST00000409357 RBM8AQ9Y5S9 174 aaKnown RBP12.06□□□□□ -0.48
NIF3L1-204ENST00000409357 CDHR2Q9BYE9 1310 aa12.06□□□□□ -0.48
NIF3L1-204ENST00000409357 TAF1P21675 1872 aa12.06□□□□□ -0.48
NIF3L1-204ENST00000409357 DICER1Q9UPY3 1922 aaKnown RBP12.06□□□□□ -0.48
NIF3L1-204ENST00000409357 TARSL2A2RTX5 802 aaKnown RBP12.06□□□□□ -0.48
NIF3L1-204ENST00000409357 H3BQV1 296 aa12.06□□□□□ -0.48
NIF3L1-204ENST00000409357 RNF40O75150 1001 aa12.06□□□□□ -0.48
NIF3L1-204ENST00000409357 CLSTN1O94985 981 aa12.06□□□□□ -0.48
NIF3L1-204ENST00000409357 YEATS4O95619 227 aa12.06□□□□□ -0.48
NIF3L1-204ENST00000409357 HOXB7P09629 217 aa12.06□□□□□ -0.48
NIF3L1-204ENST00000409357 TOP1P11387 765 aaKnown RBP12.06□□□□□ -0.48
NIF3L1-204ENST00000409357 CPA1P15085 419 aa12.06□□□□□ -0.48
NIF3L1-204ENST00000409357 ARHGAP25P42331 645 aa12.06□□□□□ -0.48
NIF3L1-204ENST00000409357 UBASH3AP57075 661 aa12.06□□□□□ -0.48
NIF3L1-204ENST00000409357 PPFIA1Q13136 1202 aa12.06□□□□□ -0.48
NIF3L1-204ENST00000409357 DRP2Q13474 957 aa12.06□□□□□ -0.48
NIF3L1-204ENST00000409357 IFFO2Q5TF58 517 aa12.06□□□□□ -0.48
NIF3L1-204ENST00000409357 SYNE4Q8N205 404 aa12.06□□□□□ -0.48
NIF3L1-204ENST00000409357 FSIP1Q8NA03 581 aa12.06□□□□□ -0.48
NIF3L1-204ENST00000409357 MASTLQ96GX5 879 aa12.06□□□□□ -0.48
NIF3L1-204ENST00000409357 LARP6Q9BRS8 491 aaKnown RBP12.06□□□□□ -0.48
NIF3L1-204ENST00000409357 HSD3B7Q9H2F3 369 aa12.06□□□□□ -0.48
NIF3L1-204ENST00000409357 GPBP1L1Q9HC44 474 aaPredicted RBP12.06□□□□□ -0.48
NIF3L1-204ENST00000409357 NEDD4P46934 1319 aa12.06□□□□□ -0.48
NIF3L1-204ENST00000409357 DDX60Q8IY21 1712 aaKnown RBP12.05□□□□□ -0.48
NIF3L1-204ENST00000409357 N4BP1O75113 896 aaKnown RBP12.05□□□□□ -0.48
NIF3L1-204ENST00000409357 WDHD1O75717 1129 aaPredicted RBP12.05□□□□□ -0.48
NIF3L1-204ENST00000409357 MNX1P50219 401 aaPredicted RBP12.05□□□□□ -0.48
NIF3L1-204ENST00000409357 ICA1Q05084 483 aa12.05□□□□□ -0.48
NIF3L1-204ENST00000409357 SCRN1Q12765 414 aa12.05□□□□□ -0.48
NIF3L1-204ENST00000409357 ZKSCAN8Q15776 578 aaPredicted RBP12.05□□□□□ -0.48
NIF3L1-204ENST00000409357 DPCR1Q3MIW9 517 aa12.05□□□□□ -0.48
NIF3L1-204ENST00000409357 ISM2Q6H9L7 571 aa12.05□□□□□ -0.48
NIF3L1-204ENST00000409357 STYK1Q6J9G0 422 aa12.05□□□□□ -0.48
NIF3L1-204ENST00000409357 RPGRIP1Q96KN7 1286 aa12.05□□□□□ -0.48
NIF3L1-204ENST00000409357 PANX2Q96RD6 677 aa12.05□□□□□ -0.48
NIF3L1-204ENST00000409357 PNKPQ96T60 521 aa12.05□□□□□ -0.48
NIF3L1-204ENST00000409357 SDF4Q9BRK5 362 aa12.05□□□□□ -0.48
NIF3L1-204ENST00000409357 PHAXQ9H814 394 aaKnown RBP12.05□□□□□ -0.48
NIF3L1-204ENST00000409357 SHTN1A0MZ66 631 aa12.04□□□□□ -0.48
NIF3L1-204ENST00000409357 SLC3A2P08195 630 aaKnown RBP12.04□□□□□ -0.48
NIF3L1-204ENST00000409357 IFIT2P09913 472 aaKnown RBP12.04□□□□□ -0.48
NIF3L1-204ENST00000409357 CCDC175P0C221 793 aa12.04□□□□□ -0.48
NIF3L1-204ENST00000409357 RDXP35241 583 aaKnown RBP12.04□□□□□ -0.48
NIF3L1-204ENST00000409357 MYL5Q02045 173 aa12.04□□□□□ -0.48
NIF3L1-204ENST00000409357 CRY2Q49AN0 593 aa12.04□□□□□ -0.48
NIF3L1-204ENST00000409357 TAX1BP1Q86VP1 789 aa12.04□□□□□ -0.48
NIF3L1-204ENST00000409357 KCNG4Q8TDN1 519 aa12.04□□□□□ -0.48
NIF3L1-204ENST00000409357 C7orf43Q8WVR3 580 aa12.04□□□□□ -0.48
NIF3L1-204ENST00000409357 CCDC102AQ96A19 550 aa12.04□□□□□ -0.48
NIF3L1-204ENST00000409357 SGSM3Q96HU1 749 aa12.04□□□□□ -0.48
NIF3L1-204ENST00000409357 GPATCH3Q96I76 525 aa12.04□□□□□ -0.48
NIF3L1-204ENST00000409357 DBF4Q9UBU7 674 aaPredicted RBP12.04□□□□□ -0.48
NIF3L1-204ENST00000409357 ZC3H4Q9UPT8 1303 aaKnown RBP12.04□□□□□ -0.48
NIF3L1-204ENST00000409357 COL4A1P02462 1669 aa12.04□□□□□ -0.48
NIF3L1-204ENST00000409357 FAM237AA0A1B0GTK4 181 aa12.03□□□□□ -0.48
NIF3L1-204ENST00000409357 PATL2C9JE40 543 aaKnown RBP12.03□□□□□ -0.48
NIF3L1-204ENST00000409357 NPR1P16066 1061 aa12.03□□□□□ -0.48
NIF3L1-204ENST00000409357 FECHP22830 423 aa12.03□□□□□ -0.48
NIF3L1-204ENST00000409357 SSR1P43307 286 aaKnown RBP12.03□□□□□ -0.48
NIF3L1-204ENST00000409357 IRAK1P51617 712 aa12.03□□□□□ -0.48
NIF3L1-204ENST00000409357 SMTNP53814 917 aa12.03□□□□□ -0.48
NIF3L1-204ENST00000409357 SKOR1P84550 965 aa12.03□□□□□ -0.48
NIF3L1-204ENST00000409357 RIC1Q4ADV7 1423 aa12.03□□□□□ -0.48
NIF3L1-204ENST00000409357 EMC10Q5UCC4 262 aa12.03□□□□□ -0.48
NIF3L1-204ENST00000409357 MICALCLQ6ZW33 695 aa12.03□□□□□ -0.48
NIF3L1-204ENST00000409357 NLRP10Q86W26 655 aa12.03□□□□□ -0.48
NIF3L1-204ENST00000409357 TICAM2Q86XR7 235 aa12.03□□□□□ -0.48
NIF3L1-204ENST00000409357 CCDC12Q8WUD4 166 aaPredicted RBP12.03□□□□□ -0.48
NIF3L1-204ENST00000409357 CNKSR1Q969H4 720 aa12.03□□□□□ -0.48
NIF3L1-204ENST00000409357 NYXQ9GZU5 481 aa12.03□□□□□ -0.48
NIF3L1-204ENST00000409357 NMRK2Q9NPI5 230 aa12.03□□□□□ -0.48
NIF3L1-204ENST00000409357 ECHDC1Q9NTX5 307 aa12.03□□□□□ -0.48
NIF3L1-204ENST00000409357 SNED1Q8TER0 1413 aa12.03□□□□□ -0.48
NIF3L1-204ENST00000409357 MED23Q9ULK4 1368 aa12.03□□□□□ -0.48
NIF3L1-204ENST00000409357 CTAGE15A4D2H0 777 aa12.03□□□□□ -0.48
NIF3L1-204ENST00000409357 KIF5CO60282 957 aa12.03□□□□□ -0.48
NIF3L1-204ENST00000409357 PFKFB2O60825 505 aa12.03□□□□□ -0.48
NIF3L1-204ENST00000409357 ALDH1L1O75891 902 aa12.03□□□□□ -0.48
NIF3L1-204ENST00000409357 CTAGE8P0CG41 777 aa12.03□□□□□ -0.48
NIF3L1-204ENST00000409357 C1QTNF8P60827 252 aa12.03□□□□□ -0.48
NIF3L1-204ENST00000409357 GRIK3Q13003 919 aa12.03□□□□□ -0.48
NIF3L1-204ENST00000409357 MTX1Q13505 466 aa12.03□□□□□ -0.48
NIF3L1-204ENST00000409357 NBPF9Q3BBW0 867 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms