RNA–Protein interactions for RNA: ENST00000409159.2

RAB1C-201, Transcript of RAB1C, member RAS oncogene family pseudogene, humanhuman

BASIC

Gene RAB1C, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1C-201ENST00000409159 NYAP2Q9P242 653 aa13.09□□□□□ -0.31
RAB1C-201ENST00000409159 NAP1L2Q9ULW6 460 aaPredicted RBP13.09□□□□□ -0.31
RAB1C-201ENST00000409159 PTPDC1A2A3K4 754 aa13.08□□□□□ -0.32
RAB1C-201ENST00000409159 GLTPD2A6NH11 291 aa13.08□□□□□ -0.32
RAB1C-201ENST00000409159 STX6O43752 255 aa13.08□□□□□ -0.32
RAB1C-201ENST00000409159 CTDNEP1O95476 244 aa13.08□□□□□ -0.32
RAB1C-201ENST00000409159 SYT1P21579 422 aa13.08□□□□□ -0.32
RAB1C-201ENST00000409159 CCT2P78371 535 aaKnown RBP13.08□□□□□ -0.32
RAB1C-201ENST00000409159 NTRK3Q16288 839 aa13.08□□□□□ -0.32
RAB1C-201ENST00000409159 TBC1D10BQ4KMP7 808 aaPredicted RBP13.08□□□□□ -0.32
RAB1C-201ENST00000409159 USP50Q70EL3 339 aaPredicted RBP13.08□□□□□ -0.32
RAB1C-201ENST00000409159 SAMD7Q7Z3H4 446 aa13.08□□□□□ -0.32
RAB1C-201ENST00000409159 MICU3Q86XE3 530 aa13.08□□□□□ -0.32
RAB1C-201ENST00000409159 FAM184AQ8NB25 1140 aa13.08□□□□□ -0.32
RAB1C-201ENST00000409159 PNMA1Q8ND90 353 aa13.08□□□□□ -0.32
RAB1C-201ENST00000409159 CTCFLQ8NI51 663 aaPredicted RBP13.08□□□□□ -0.32
RAB1C-201ENST00000409159 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.08□□□□□ -0.32
RAB1C-201ENST00000409159 SENP2Q9HC62 589 aa13.08□□□□□ -0.32
RAB1C-201ENST00000409159 CABP5Q9NP86 173 aa13.08□□□□□ -0.32
RAB1C-201ENST00000409159 FOXD4L1Q9NU39 408 aa13.08□□□□□ -0.32
RAB1C-201ENST00000409159 HACL1Q9UJ83 578 aa13.08□□□□□ -0.32
RAB1C-201ENST00000409159 ATP6V1DQ9Y5K8 247 aa13.08□□□□□ -0.32
RAB1C-201ENST00000409159 IQCA1LA6NCM1 817 aa13.07□□□□□ -0.32
RAB1C-201ENST00000409159 DDNO94850 711 aaPredicted RBP13.07□□□□□ -0.32
RAB1C-201ENST00000409159 AKR1B1P15121 316 aa13.07□□□□□ -0.32
RAB1C-201ENST00000409159 ABCB5Q2M3G0 1257 aa13.07□□□□□ -0.32
RAB1C-201ENST00000409159 SLC4A8Q2Y0W8 1093 aa13.07□□□□□ -0.32
RAB1C-201ENST00000409159 RBM26Q5T8P6 1007 aaKnown RBP13.07□□□□□ -0.32
RAB1C-201ENST00000409159 LARP1BQ659C4 914 aaKnown RBP13.07□□□□□ -0.32
RAB1C-201ENST00000409159 DCAF15Q66K64 600 aa13.07□□□□□ -0.32
RAB1C-201ENST00000409159 TRIM22Q8IYM9 498 aa13.07□□□□□ -0.32
RAB1C-201ENST00000409159 CEP95Q96GE4 821 aa13.07□□□□□ -0.32
RAB1C-201ENST00000409159 TEPSINQ96N21 525 aa13.07□□□□□ -0.32
RAB1C-201ENST00000409159 TMEM47Q9BQJ4 181 aa13.07□□□□□ -0.32
RAB1C-201ENST00000409159 RNF26Q9BY78 433 aaPredicted RBP13.07□□□□□ -0.32
RAB1C-201ENST00000409159 DEFB129Q9H1M3 183 aa13.07□□□□□ -0.32
RAB1C-201ENST00000409159 DICER1Q9UPY3 1922 aaKnown RBP13.06□□□□□ -0.32
RAB1C-201ENST00000409159 SHTN1A0MZ66 631 aa13.06□□□□□ -0.32
RAB1C-201ENST00000409159 NMT2O60551 498 aa13.06□□□□□ -0.32
RAB1C-201ENST00000409159 FMNL1O95466 1100 aaPredicted RBP13.06□□□□□ -0.32
RAB1C-201ENST00000409159 EGFRP00533 1210 aa13.06□□□□□ -0.32
RAB1C-201ENST00000409159 PTMSP20962 102 aa13.06□□□□□ -0.32
RAB1C-201ENST00000409159 CDC27P30260 824 aa13.06□□□□□ -0.32
RAB1C-201ENST00000409159 ADD1P35611 737 aaKnown RBP13.06□□□□□ -0.32
RAB1C-201ENST00000409159 EPS15P42566 896 aa13.06□□□□□ -0.32
RAB1C-201ENST00000409159 SSRP1Q08945 709 aaKnown RBP13.06□□□□□ -0.32
RAB1C-201ENST00000409159 GRM4Q14833 912 aa13.06□□□□□ -0.32
RAB1C-201ENST00000409159 TMTC3Q6ZXV5 915 aa13.06□□□□□ -0.32
RAB1C-201ENST00000409159 GBP4Q96PP9 640 aa13.06□□□□□ -0.32
RAB1C-201ENST00000409159 TMEM39BQ9GZU3 492 aa13.06□□□□□ -0.32
RAB1C-201ENST00000409159 NCOA5Q9HCD5 579 aaKnown RBP13.06□□□□□ -0.32
RAB1C-201ENST00000409159 ORC3Q9UBD5 711 aaPredicted RBP13.06□□□□□ -0.32
RAB1C-201ENST00000409159 STX8Q9UNK0 236 aa13.06□□□□□ -0.32
RAB1C-201ENST00000409159 BAZ2AQ9UIF9 1905 aaKnown RBP13.05□□□□□ -0.32
RAB1C-201ENST00000409159 PRPF3O43395 683 aaKnown RBP13.05□□□□□ -0.32
RAB1C-201ENST00000409159 JAK2O60674 1132 aa13.05□□□□□ -0.32
RAB1C-201ENST00000409159 SNHG28P0DPA3 235 aa13.05□□□□□ -0.32
RAB1C-201ENST00000409159 ZSCAN22P10073 491 aaPredicted RBP13.05□□□□□ -0.32
RAB1C-201ENST00000409159 FDPSP14324 419 aaKnown RBP13.05□□□□□ -0.32
RAB1C-201ENST00000409159 SUPT20HL1Q3ZLR7 823 aa13.05□□□□□ -0.32
RAB1C-201ENST00000409159 NUP133Q8WUM0 1156 aa13.05□□□□□ -0.32
RAB1C-201ENST00000409159 ZSCAN16Q9H4T2 348 aaPredicted RBP13.05□□□□□ -0.32
RAB1C-201ENST00000409159 MTMR6Q9Y217 621 aa13.05□□□□□ -0.32
RAB1C-201ENST00000409159 ADAMTSL1Q8N6G6 1762 aa13.04□□□□□ -0.32
RAB1C-201ENST00000409159 CDK5RAP2Q96SN8 1893 aa13.04□□□□□ -0.32
RAB1C-201ENST00000409159 PALM3A6NDB9 673 aaPredicted RBP13.04□□□□□ -0.32
RAB1C-201ENST00000409159 DCAF8L1A6NGE4 600 aa13.04□□□□□ -0.32
RAB1C-201ENST00000409159 CTNND1O60716 968 aaKnown RBP13.04□□□□□ -0.32
RAB1C-201ENST00000409159 DEXIO95424 95 aa13.04□□□□□ -0.32
RAB1C-201ENST00000409159 ASNSP08243 561 aa13.04□□□□□ -0.32
RAB1C-201ENST00000409159 CAP2P40123 477 aa13.04□□□□□ -0.32
RAB1C-201ENST00000409159 HIRAP54198 1017 aaPredicted RBP13.04□□□□□ -0.32
RAB1C-201ENST00000409159 AKAP17AQ02040 695 aaKnown RBP13.04□□□□□ -0.32
RAB1C-201ENST00000409159 FUT2Q10981 343 aa13.04□□□□□ -0.32
RAB1C-201ENST00000409159 ASPRV1Q53RT3 343 aa13.04□□□□□ -0.32
RAB1C-201ENST00000409159 GPATCH4Q5T3I0 446 aaKnown RBP13.04□□□□□ -0.32
RAB1C-201ENST00000409159 ANGEL2Q5VTE6 544 aaKnown RBP13.04□□□□□ -0.32
RAB1C-201ENST00000409159 NBPF11Q86T75 865 aa13.04□□□□□ -0.32
RAB1C-201ENST00000409159 PNMA8AQ86V59 439 aaPredicted RBP13.04□□□□□ -0.32
RAB1C-201ENST00000409159 TRPM4Q8TD43 1214 aa13.04□□□□□ -0.32
RAB1C-201ENST00000409159 TNPO1Q92973 898 aaKnown RBP13.04□□□□□ -0.32
RAB1C-201ENST00000409159 MYL10Q9BUA6 226 aa13.04□□□□□ -0.32
RAB1C-201ENST00000409159 SH2D4AQ9H788 454 aa13.04□□□□□ -0.32
RAB1C-201ENST00000409159 ZNF112Q9UJU3 913 aa13.04□□□□□ -0.32
RAB1C-201ENST00000409159 ZDHHC9Q9Y397 364 aa13.04□□□□□ -0.32
RAB1C-201ENST00000409159 ECM29Q5VYK3 1845 aa13.04□□□□□ -0.32
RAB1C-201ENST00000409159 MPHOSPH10O00566 681 aaKnown RBP13.03□□□□□ -0.32
RAB1C-201ENST00000409159 PARP1P09874 1014 aaKnown RBP13.03□□□□□ -0.32
RAB1C-201ENST00000409159 XBP1P17861 261 aa13.03□□□□□ -0.32
RAB1C-201ENST00000409159 ICA1Q05084 483 aa13.03□□□□□ -0.32
RAB1C-201ENST00000409159 ATL3Q6DD88 541 aa13.03□□□□□ -0.32
RAB1C-201ENST00000409159 GMCL1P1Q8NEA9 526 aa13.03□□□□□ -0.32
RAB1C-201ENST00000409159 FBXO18Q8NFZ0 1043 aa13.03□□□□□ -0.32
RAB1C-201ENST00000409159 DCAF4Q8WV16 495 aa13.03□□□□□ -0.32
RAB1C-201ENST00000409159 DCPSQ96C86 337 aaKnown RBP13.03□□□□□ -0.32
RAB1C-201ENST00000409159 SPZ1Q9BXG8 430 aa13.03□□□□□ -0.32
RAB1C-201ENST00000409159 ZNF341Q9BYN7 854 aa13.03□□□□□ -0.32
RAB1C-201ENST00000409159 GGA3Q9NZ52 723 aa13.03□□□□□ -0.32
RAB1C-201ENST00000409159 CLIP2Q9UDT6 1046 aa13.03□□□□□ -0.32
RAB1C-201ENST00000409159 MYH1P12882 1939 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms