RNA–Protein interactions for RNA: ENST00000405025.5

HDAC11-206, Transcript of histone deacetylase 11, humanhuman

TSL 4 BASIC

Gene HDAC11, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-206ENST00000405025 HOXA7P31268 230 aaPredicted RBP31.54■■■□□ 2.64
HDAC11-206ENST00000405025 FCGRTP55899 365 aa31.54■■■□□ 2.64
HDAC11-206ENST00000405025 LRRFIP1Q32MZ4 808 aaKnown RBP31.54■■■□□ 2.64
HDAC11-206ENST00000405025 ZMYM1Q5SVZ6 1142 aa31.54■■■□□ 2.64
HDAC11-206ENST00000405025 CLEC10AQ8IUN9 316 aa31.54■■■□□ 2.64
HDAC11-206ENST00000405025 ARPP21Q9UBL0 812 aaPredicted RBP31.54■■■□□ 2.64
HDAC11-206ENST00000405025 IRX3P78415 501 aaPredicted RBP31.53■■■□□ 2.64
HDAC11-206ENST00000405025 CHD1LQ86WJ1 897 aa31.53■■■□□ 2.64
HDAC11-206ENST00000405025 C12orf42Q96LP6 360 aa31.53■■■□□ 2.64
HDAC11-206ENST00000405025 P2RX7Q99572 595 aaKnown RBP31.53■■■□□ 2.64
HDAC11-206ENST00000405025 KIAA1683Q9H0B3 1180 aa31.53■■■□□ 2.64
HDAC11-206ENST00000405025 PEX10O60683 326 aa31.52■■■□□ 2.64
HDAC11-206ENST00000405025 NUCB1Q02818 461 aa31.52■■■□□ 2.64
HDAC11-206ENST00000405025 FAM110CQ1W6H9 321 aa31.52■■■□□ 2.64
HDAC11-206ENST00000405025 TAOK2Q9UL54 1235 aa31.52■■■□□ 2.64
HDAC11-206ENST00000405025 MYPNQ86TC9 1320 aa31.51■■■□□ 2.64
HDAC11-206ENST00000405025 A0A1W2PRG0 241 aa31.51■■■□□ 2.63
HDAC11-206ENST00000405025 GCLCP48506 637 aaPredicted RBP31.51■■■□□ 2.63
HDAC11-206ENST00000405025 PRKCZQ05513 592 aa31.51■■■□□ 2.63
HDAC11-206ENST00000405025 SLC9C1Q4G0N8 1177 aa31.51■■■□□ 2.63
HDAC11-206ENST00000405025 SBK1Q52WX2 424 aa31.51■■■□□ 2.63
HDAC11-206ENST00000405025 GIMAP6Q6P9H5 292 aa31.51■■■□□ 2.63
HDAC11-206ENST00000405025 TMEM179Q6ZVK1 233 aa31.51■■■□□ 2.63
HDAC11-206ENST00000405025 SH3TC2Q8TF17 1288 aa31.51■■■□□ 2.63
HDAC11-206ENST00000405025 EVI5LQ96CN4 794 aa31.51■■■□□ 2.63
HDAC11-206ENST00000405025 CENPFP49454 3210 aa31.51■■■□□ 2.63
HDAC11-206ENST00000405025 PRMT2P55345 433 aa31.5■■■□□ 2.63
HDAC11-206ENST00000405025 STK11IPQ8N1F8 1099 aa31.5■■■□□ 2.63
HDAC11-206ENST00000405025 GABRQQ9UN88 632 aa31.5■■■□□ 2.63
HDAC11-206ENST00000405025 GNAT2P19087 354 aa31.49■■■□□ 2.63
HDAC11-206ENST00000405025 VCAM1P19320 739 aa31.49■■■□□ 2.63
HDAC11-206ENST00000405025 HOXD10P28358 340 aa31.49■■■□□ 2.63
HDAC11-206ENST00000405025 USP14P54578 494 aa31.49■■■□□ 2.63
HDAC11-206ENST00000405025 HERVK_113P62684 666 aa31.49■■■□□ 2.63
HDAC11-206ENST00000405025 POTEEQ6S8J3 1075 aa31.49■■■□□ 2.63
HDAC11-206ENST00000405025 CCDC129Q6ZRS4 1044 aa31.49■■■□□ 2.63
HDAC11-206ENST00000405025 ZNF333Q96JL9 665 aa31.49■■■□□ 2.63
HDAC11-206ENST00000405025 TXNRD2Q9NNW7 524 aa31.49■■■□□ 2.63
HDAC11-206ENST00000405025 ROBO3Q96MS0 1386 aa31.48■■■□□ 2.63
HDAC11-206ENST00000405025 MINDY4BA8MYZ0 360 aa31.48■■■□□ 2.63
HDAC11-206ENST00000405025 APPP05067 770 aa31.48■■■□□ 2.63
HDAC11-206ENST00000405025 TDO2P48775 406 aa31.48■■■□□ 2.63
HDAC11-206ENST00000405025 MLLT1Q03111 559 aaPredicted RBP31.48■■■□□ 2.63
HDAC11-206ENST00000405025 SIAH1Q8IUQ4 282 aa31.48■■■□□ 2.63
HDAC11-206ENST00000405025 PLEKHM2Q8IWE5 1019 aa31.48■■■□□ 2.63
HDAC11-206ENST00000405025 DOCK3Q8IZD9 2030 aa31.48■■■□□ 2.63
HDAC11-206ENST00000405025 PATL2C9JE40 543 aaKnown RBP31.47■■■□□ 2.63
HDAC11-206ENST00000405025 MORF4L1Q9UBU8 362 aa31.47■■■□□ 2.63
HDAC11-206ENST00000405025 RBBP6Q7Z6E9 1792 aaKnown RBP31.47■■■□□ 2.63
HDAC11-206ENST00000405025 GREB1LQ9C091 1923 aaPredicted RBP31.46■■■□□ 2.63
HDAC11-206ENST00000405025 POTEFA5A3E0 1075 aa31.46■■■□□ 2.63
HDAC11-206ENST00000405025 TNPO2O14787 897 aaKnown RBP31.46■■■□□ 2.63
HDAC11-206ENST00000405025 IFNL3Q8IZI9 196 aa31.46■■■□□ 2.63
HDAC11-206ENST00000405025 RAET1EQ8TD07 263 aa31.46■■■□□ 2.63
HDAC11-206ENST00000405025 CCDC17Q96LX7 622 aa31.46■■■□□ 2.63
HDAC11-206ENST00000405025 FOXP2O15409 715 aa31.45■■■□□ 2.63
HDAC11-206ENST00000405025 MYCP01106 439 aaPredicted RBP31.45■■■□□ 2.63
HDAC11-206ENST00000405025 ICA1Q05084 483 aa31.45■■■□□ 2.63
HDAC11-206ENST00000405025 KIAA1755Q5JYT7 1200 aa31.45■■■□□ 2.63
HDAC11-206ENST00000405025 USP17L15C9J2P7 530 aa31.44■■■□□ 2.62
HDAC11-206ENST00000405025 USP17L13C9JLJ4 530 aa31.44■■■□□ 2.62
HDAC11-206ENST00000405025 USP17L11C9JVI0 530 aa31.44■■■□□ 2.62
HDAC11-206ENST00000405025 USP17L18D6R9N7 530 aa31.44■■■□□ 2.62
HDAC11-206ENST00000405025 USP17L22D6RA61 530 aa31.44■■■□□ 2.62
HDAC11-206ENST00000405025 USP17L17D6RBQ6 530 aa31.44■■■□□ 2.62
HDAC11-206ENST00000405025 USP17L19D6RCP7 530 aa31.44■■■□□ 2.62
HDAC11-206ENST00000405025 USP17L20D6RJB6 530 aa31.44■■■□□ 2.62
HDAC11-206ENST00000405025 USP17L24Q0WX57 530 aa31.44■■■□□ 2.62
HDAC11-206ENST00000405025 CATSPERGQ6ZRH7 1159 aa31.44■■■□□ 2.62
HDAC11-206ENST00000405025 GNL3Q9BVP2 549 aaKnown RBP eCLIP31.44■■■□□ 2.62
HDAC11-206ENST00000405025 RBPJLQ9UBG7 517 aa31.44■■■□□ 2.62
HDAC11-206ENST00000405025 RASA1P20936 1047 aa31.43■■■□□ 2.62
HDAC11-206ENST00000405025 FLT3LGP49771 235 aa31.43■■■□□ 2.62
HDAC11-206ENST00000405025 NBPF11Q86T75 865 aa31.43■■■□□ 2.62
HDAC11-206ENST00000405025 FAM227BQ96M60 508 aa31.43■■■□□ 2.62
HDAC11-206ENST00000405025 RPAP3Q9H6T3 665 aaPredicted RBP31.43■■■□□ 2.62
HDAC11-206ENST00000405025 KIAA0100Q14667 2235 aaKnown RBP31.42■■■□□ 2.62
HDAC11-206ENST00000405025 A0A0D9SFI3 127 aa31.41■■■□□ 2.62
HDAC11-206ENST00000405025 TRIM6-TRIM34B2RNG4 842 aa31.41■■■□□ 2.62
HDAC11-206ENST00000405025 GRK4P32298 578 aa31.41■■■□□ 2.62
HDAC11-206ENST00000405025 VPS53Q5VIR6 699 aa31.41■■■□□ 2.62
HDAC11-206ENST00000405025 PAGR1Q9BTK6 254 aa31.41■■■□□ 2.62
HDAC11-206ENST00000405025 NACAP1Q9BZK3 213 aa31.41■■■□□ 2.62
HDAC11-206ENST00000405025 OSBPL3Q9H4L5 887 aa31.41■■■□□ 2.62
HDAC11-206ENST00000405025 ARHGEF10LQ9HCE6 1279 aa31.41■■■□□ 2.62
HDAC11-206ENST00000405025 PLXNB2O15031 1838 aa31.4■■■□□ 2.62
HDAC11-206ENST00000405025 Q3C1V9 767 aa31.4■■■□□ 2.62
HDAC11-206ENST00000405025 GPRC5AQ8NFJ5 357 aa31.4■■■□□ 2.62
HDAC11-206ENST00000405025 RILPL2Q969X0 211 aa31.4■■■□□ 2.62
HDAC11-206ENST00000405025 COA7Q96BR5 231 aa31.4■■■□□ 2.62
HDAC11-206ENST00000405025 NAPBQ9H115 298 aa31.4■■■□□ 2.62
HDAC11-206ENST00000405025 TMX2Q9Y320 296 aa31.4■■■□□ 2.62
HDAC11-206ENST00000405025 PRDM1O75626 825 aa31.39■■■□□ 2.62
HDAC11-206ENST00000405025 CNMDO75829 334 aa31.39■■■□□ 2.62
HDAC11-206ENST00000405025 EEF2P13639 858 aaKnown RBP31.39■■■□□ 2.62
HDAC11-206ENST00000405025 ERVK-9P63128 1117 aa31.39■■■□□ 2.62
HDAC11-206ENST00000405025 ERVK-24P63145 666 aa31.39■■■□□ 2.62
HDAC11-206ENST00000405025 MKNK2Q9HBH9 465 aa31.39■■■□□ 2.62
HDAC11-206ENST00000405025 HELLSQ9NRZ9 838 aa31.39■■■□□ 2.62
HDAC11-206ENST00000405025 RLFQ13129 1914 aa31.39■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms