RNA–Protein interactions for RNA: ENST00000399973.1

USP16-202, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 3

Gene USP16, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-202ENST00000399973 SWAP70Q9UH65 585 aa10.09□□□□□ -0.79
USP16-202ENST00000399973 SLC45A1Q9Y2W3 748 aa10.09□□□□□ -0.79
USP16-202ENST00000399973 PTCH2Q9Y6C5 1203 aa10.09□□□□□ -0.79
USP16-202ENST00000399973 A0A0G2JMZ2 1700 aa10.09□□□□□ -0.79
USP16-202ENST00000399973 PLXNB2O15031 1838 aa10.09□□□□□ -0.79
USP16-202ENST00000399973 COL11A1P12107 1806 aaPredicted RBP10.08□□□□□ -0.8
USP16-202ENST00000399973 MYCP01106 439 aaPredicted RBP10.08□□□□□ -0.8
USP16-202ENST00000399973 BCRP11274 1271 aa10.08□□□□□ -0.8
USP16-202ENST00000399973 PSMC4P43686 418 aa10.08□□□□□ -0.8
USP16-202ENST00000399973 FCGRTP55899 365 aa10.08□□□□□ -0.8
USP16-202ENST00000399973 GABPAQ06546 454 aa10.08□□□□□ -0.8
USP16-202ENST00000399973 SEPT2Q15019 361 aa10.08□□□□□ -0.8
USP16-202ENST00000399973 SLC9C1Q4G0N8 1177 aa10.08□□□□□ -0.8
USP16-202ENST00000399973 SH3D19Q5HYK7 790 aa10.08□□□□□ -0.8
USP16-202ENST00000399973 C12orf60Q5U649 245 aa10.08□□□□□ -0.8
USP16-202ENST00000399973 USP17L2Q6R6M4 530 aa10.08□□□□□ -0.8
USP16-202ENST00000399973 ANKRD13CQ8N6S4 541 aa10.08□□□□□ -0.8
USP16-202ENST00000399973 TRIM47Q96LD4 638 aa10.08□□□□□ -0.8
USP16-202ENST00000399973 STRBPQ96SI9 672 aaKnown RBP10.08□□□□□ -0.8
USP16-202ENST00000399973 ASCC2Q9H1I8 757 aaPredicted RBP10.08□□□□□ -0.8
USP16-202ENST00000399973 EPB41L4AQ9HCS5 686 aaPredicted RBP10.08□□□□□ -0.8
USP16-202ENST00000399973 MYPNQ86TC9 1320 aa10.07□□□□□ -0.8
USP16-202ENST00000399973 ROBO3Q96MS0 1386 aa10.07□□□□□ -0.8
USP16-202ENST00000399973 GSG1L2A8MUP6 293 aa10.07□□□□□ -0.8
USP16-202ENST00000399973 C19orf81C9J6K1 198 aa10.07□□□□□ -0.8
USP16-202ENST00000399973 TNPO2O14787 897 aaKnown RBP10.07□□□□□ -0.8
USP16-202ENST00000399973 AKR1B1P15121 316 aa10.07□□□□□ -0.8
USP16-202ENST00000399973 GNAT2P19087 354 aa10.07□□□□□ -0.8
USP16-202ENST00000399973 CTGFP29279 349 aa10.07□□□□□ -0.8
USP16-202ENST00000399973 CDK8P49336 464 aa10.07□□□□□ -0.8
USP16-202ENST00000399973 ATP2B2Q01814 1243 aa10.07□□□□□ -0.8
USP16-202ENST00000399973 NUCB1Q02818 461 aa10.07□□□□□ -0.8
USP16-202ENST00000399973 ICA1Q05084 483 aa10.07□□□□□ -0.8
USP16-202ENST00000399973 ZMYM1Q5SVZ6 1142 aa10.07□□□□□ -0.8
USP16-202ENST00000399973 CTR9Q6PD62 1173 aa10.07□□□□□ -0.8
USP16-202ENST00000399973 CCDC129Q6ZRS4 1044 aa10.07□□□□□ -0.8
USP16-202ENST00000399973 TMEM179Q6ZVK1 233 aa10.07□□□□□ -0.8
USP16-202ENST00000399973 C16orf86Q6ZW13 317 aa10.07□□□□□ -0.8
USP16-202ENST00000399973 ACER1Q8TDN7 264 aa10.07□□□□□ -0.8
USP16-202ENST00000399973 RILPL2Q969X0 211 aa10.07□□□□□ -0.8
USP16-202ENST00000399973 EVI5LQ96CN4 794 aa10.07□□□□□ -0.8
USP16-202ENST00000399973 PAGR1Q9BTK6 254 aa10.07□□□□□ -0.8
USP16-202ENST00000399973 NACAP1Q9BZK3 213 aa10.07□□□□□ -0.8
USP16-202ENST00000399973 STAP2Q9UGK3 403 aa10.07□□□□□ -0.8
USP16-202ENST00000399973 TAOK2Q9UL54 1235 aa10.07□□□□□ -0.8
USP16-202ENST00000399973 DOCK3Q8IZD9 2030 aa10.06□□□□□ -0.8
USP16-202ENST00000399973 RAD21O60216 631 aa10.06□□□□□ -0.8
USP16-202ENST00000399973 VCAM1P19320 739 aa10.06□□□□□ -0.8
USP16-202ENST00000399973 GUCY1A2P33402 732 aa10.06□□□□□ -0.8
USP16-202ENST00000399973 GCLCP48506 637 aaPredicted RBP10.06□□□□□ -0.8
USP16-202ENST00000399973 USP14P54578 494 aa10.06□□□□□ -0.8
USP16-202ENST00000399973 HERVK_113P62684 666 aa10.06□□□□□ -0.8
USP16-202ENST00000399973 PRKCZQ05513 592 aa10.06□□□□□ -0.8
USP16-202ENST00000399973 FAM110CQ1W6H9 321 aa10.06□□□□□ -0.8
USP16-202ENST00000399973 RAET1EQ8TD07 263 aa10.06□□□□□ -0.8
USP16-202ENST00000399973 SH3TC2Q8TF17 1288 aa10.06□□□□□ -0.8
USP16-202ENST00000399973 TANGO6Q9C0B7 1094 aa10.06□□□□□ -0.8
USP16-202ENST00000399973 KIAA1683Q9H0B3 1180 aa10.06□□□□□ -0.8
USP16-202ENST00000399973 NAPBQ9H115 298 aa10.06□□□□□ -0.8
USP16-202ENST00000399973 ARHGEF10LQ9HCE6 1279 aa10.06□□□□□ -0.8
USP16-202ENST00000399973 EMILIN3Q9NT22 766 aa10.06□□□□□ -0.8
USP16-202ENST00000399973 RLFQ13129 1914 aa10.05□□□□□ -0.8
USP16-202ENST00000399973 A0A0D9SFI3 127 aa10.05□□□□□ -0.8
USP16-202ENST00000399973 PEX10O60683 326 aa10.05□□□□□ -0.8
USP16-202ENST00000399973 PRDM1O75626 825 aa10.05□□□□□ -0.8
USP16-202ENST00000399973 GNRH1P01148 92 aa10.05□□□□□ -0.8
USP16-202ENST00000399973 HOXD10P28358 340 aa10.05□□□□□ -0.8
USP16-202ENST00000399973 NMIQ13287 307 aaPredicted RBP10.05□□□□□ -0.8
USP16-202ENST00000399973 IFNL3Q8IZI9 196 aa10.05□□□□□ -0.8
USP16-202ENST00000399973 RPAP3Q9H6T3 665 aaPredicted RBP10.05□□□□□ -0.8
USP16-202ENST00000399973 SH2D4AQ9H788 454 aa10.05□□□□□ -0.8
USP16-202ENST00000399973 MKNK2Q9HBH9 465 aa10.05□□□□□ -0.8
USP16-202ENST00000399973 CWC22Q9HCG8 908 aaKnown RBP10.05□□□□□ -0.8
USP16-202ENST00000399973 SRRDQ9UH36 339 aa10.05□□□□□ -0.8
USP16-202ENST00000399973 HTTP42858 3142 aa10.05□□□□□ -0.8
USP16-202ENST00000399973 A0A1W2PRG0 241 aa10.04□□□□□ -0.8
USP16-202ENST00000399973 USP17L15C9J2P7 530 aa10.04□□□□□ -0.8
USP16-202ENST00000399973 USP17L13C9JLJ4 530 aa10.04□□□□□ -0.8
USP16-202ENST00000399973 USP17L11C9JVI0 530 aa10.04□□□□□ -0.8
USP16-202ENST00000399973 USP17L18D6R9N7 530 aa10.04□□□□□ -0.8
USP16-202ENST00000399973 USP17L22D6RA61 530 aa10.04□□□□□ -0.8
USP16-202ENST00000399973 USP17L17D6RBQ6 530 aa10.04□□□□□ -0.8
USP16-202ENST00000399973 USP17L19D6RCP7 530 aa10.04□□□□□ -0.8
USP16-202ENST00000399973 USP17L20D6RJB6 530 aa10.04□□□□□ -0.8
USP16-202ENST00000399973 HOXA7P31268 230 aaPredicted RBP10.04□□□□□ -0.8
USP16-202ENST00000399973 PRMT2P55345 433 aa10.04□□□□□ -0.8
USP16-202ENST00000399973 MLLT1Q03111 559 aaPredicted RBP10.04□□□□□ -0.8
USP16-202ENST00000399973 USP17L24Q0WX57 530 aa10.04□□□□□ -0.8
USP16-202ENST00000399973 SBK1Q52WX2 424 aa10.04□□□□□ -0.8
USP16-202ENST00000399973 GIMAP6Q6P9H5 292 aa10.04□□□□□ -0.8
USP16-202ENST00000399973 PLEKHM2Q8IWE5 1019 aa10.04□□□□□ -0.8
USP16-202ENST00000399973 CCAR1Q8IX12 1150 aaKnown RBP10.04□□□□□ -0.8
USP16-202ENST00000399973 SPICE1Q8N0Z3 855 aa10.04□□□□□ -0.8
USP16-202ENST00000399973 COA7Q96BR5 231 aa10.04□□□□□ -0.8
USP16-202ENST00000399973 C12orf42Q96LP6 360 aa10.04□□□□□ -0.8
USP16-202ENST00000399973 CCDC17Q96LX7 622 aa10.04□□□□□ -0.8
USP16-202ENST00000399973 FAM227BQ96M60 508 aa10.04□□□□□ -0.8
USP16-202ENST00000399973 P2RX7Q99572 595 aaKnown RBP10.04□□□□□ -0.8
USP16-202ENST00000399973 DIAPH3Q9NSV4 1193 aa10.04□□□□□ -0.8
USP16-202ENST00000399973 BIN2Q9UBW5 565 aaPredicted RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms