RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 POTEFA5A3E0 1075 aa17.86■□□□□ 0.45
SMIM11A-203ENST00000399299 TNPO2O14787 897 aaKnown RBP17.86■□□□□ 0.45
SMIM11A-203ENST00000399299 GRK4P32298 578 aa17.86■□□□□ 0.45
SMIM11A-203ENST00000399299 TMEM179Q6ZVK1 233 aa17.86■□□□□ 0.45
SMIM11A-203ENST00000399299 C16orf86Q6ZW13 317 aa17.86■□□□□ 0.45
SMIM11A-203ENST00000399299 SLC44A5Q8NCS7 719 aa17.86■□□□□ 0.45
SMIM11A-203ENST00000399299 SH3TC2Q8TF17 1288 aa17.86■□□□□ 0.45
SMIM11A-203ENST00000399299 DYNLL2Q96FJ2 89 aa17.86■□□□□ 0.45
SMIM11A-203ENST00000399299 TMEM106CQ9BVX2 250 aa17.86■□□□□ 0.45
SMIM11A-203ENST00000399299 ARPP21Q9UBL0 812 aaPredicted RBP17.86■□□□□ 0.45
SMIM11A-203ENST00000399299 BRCA2P51587 3418 aa17.86■□□□□ 0.45
SMIM11A-203ENST00000399299 GNAT2P19087 354 aa17.85■□□□□ 0.45
SMIM11A-203ENST00000399299 HERVK_113P62684 666 aa17.85■□□□□ 0.45
SMIM11A-203ENST00000399299 IRF5Q13568 498 aa17.85■□□□□ 0.45
SMIM11A-203ENST00000399299 SEPT2Q15019 361 aa17.85■□□□□ 0.45
SMIM11A-203ENST00000399299 SBK1Q52WX2 424 aa17.85■□□□□ 0.45
SMIM11A-203ENST00000399299 CTR9Q6PD62 1173 aa17.85■□□□□ 0.45
SMIM11A-203ENST00000399299 SLAIN1Q8ND83 568 aa17.85■□□□□ 0.45
SMIM11A-203ENST00000399299 ACER1Q8TDN7 264 aa17.85■□□□□ 0.45
SMIM11A-203ENST00000399299 COA7Q96BR5 231 aa17.85■□□□□ 0.45
SMIM11A-203ENST00000399299 CCDC17Q96LX7 622 aa17.85■□□□□ 0.45
SMIM11A-203ENST00000399299 P2RX7Q99572 595 aaKnown RBP17.85■□□□□ 0.45
SMIM11A-203ENST00000399299 STAP2Q9UGK3 403 aa17.85■□□□□ 0.45
SMIM11A-203ENST00000399299 GABRQQ9UN88 632 aa17.85■□□□□ 0.45
SMIM11A-203ENST00000399299 CYP2D7A0A087X1C5 515 aa17.84■□□□□ 0.45
SMIM11A-203ENST00000399299 GSG1L2A8MUP6 293 aa17.84■□□□□ 0.45
SMIM11A-203ENST00000399299 USP17L15C9J2P7 530 aa17.84■□□□□ 0.45
SMIM11A-203ENST00000399299 USP17L13C9JLJ4 530 aa17.84■□□□□ 0.45
SMIM11A-203ENST00000399299 USP17L11C9JVI0 530 aa17.84■□□□□ 0.45
SMIM11A-203ENST00000399299 USP17L18D6R9N7 530 aa17.84■□□□□ 0.45
SMIM11A-203ENST00000399299 USP17L22D6RA61 530 aa17.84■□□□□ 0.45
SMIM11A-203ENST00000399299 USP17L17D6RBQ6 530 aa17.84■□□□□ 0.45
SMIM11A-203ENST00000399299 USP17L19D6RCP7 530 aa17.84■□□□□ 0.45
SMIM11A-203ENST00000399299 USP17L20D6RJB6 530 aa17.84■□□□□ 0.45
SMIM11A-203ENST00000399299 MPHOSPH10O00566 681 aaKnown RBP17.84■□□□□ 0.45
SMIM11A-203ENST00000399299 GPAA1O43292 621 aa17.84■□□□□ 0.45
SMIM11A-203ENST00000399299 CDK8P49336 464 aa17.84■□□□□ 0.45
SMIM11A-203ENST00000399299 USP17L24Q0WX57 530 aa17.84■□□□□ 0.45
SMIM11A-203ENST00000399299 SMC5Q8IY18 1101 aa17.84■□□□□ 0.45
SMIM11A-203ENST00000399299 RWDD1Q9H446 243 aaPredicted RBP17.84■□□□□ 0.45
SMIM11A-203ENST00000399299 GREB1LQ9C091 1923 aaPredicted RBP17.84■□□□□ 0.45
SMIM11A-203ENST00000399299 ROBO3Q96MS0 1386 aa17.83■□□□□ 0.45
SMIM11A-203ENST00000399299 VCAM1P19320 739 aa17.83■□□□□ 0.44
SMIM11A-203ENST00000399299 FLT3LGP49771 235 aa17.83■□□□□ 0.44
SMIM11A-203ENST00000399299 ZYXQ15942 572 aaKnown RBP17.83■□□□□ 0.44
SMIM11A-203ENST00000399299 PXYLP1Q8TE99 480 aa17.83■□□□□ 0.44
SMIM11A-203ENST00000399299 FSD1Q9BTV5 496 aa17.83■□□□□ 0.44
SMIM11A-203ENST00000399299 PLXNB2O15031 1838 aa17.82■□□□□ 0.44
SMIM11A-203ENST00000399299 SMIM22K7EJ46 135 aa17.82■□□□□ 0.44
SMIM11A-203ENST00000399299 M0R2C6 588 aa17.82■□□□□ 0.44
SMIM11A-203ENST00000399299 PDE1AP54750 535 aa17.82■□□□□ 0.44
SMIM11A-203ENST00000399299 LBX2Q6XYB7 198 aa17.82■□□□□ 0.44
SMIM11A-203ENST00000399299 CATSPERGQ6ZRH7 1159 aa17.82■□□□□ 0.44
SMIM11A-203ENST00000399299 GPRC5AQ8NFJ5 357 aa17.82■□□□□ 0.44
SMIM11A-203ENST00000399299 A0A1W2PRG0 241 aa17.81■□□□□ 0.44
SMIM11A-203ENST00000399299 ADCY3O60266 1144 aa17.81■□□□□ 0.44
SMIM11A-203ENST00000399299 AKR1B1P15121 316 aa17.81■□□□□ 0.44
SMIM11A-203ENST00000399299 UBXN2AP68543 259 aa17.81■□□□□ 0.44
SMIM11A-203ENST00000399299 ZMYM1Q5SVZ6 1142 aa17.81■□□□□ 0.44
SMIM11A-203ENST00000399299 TICAM2Q86XR7 235 aa17.81■□□□□ 0.44
SMIM11A-203ENST00000399299 EXOC6Q8TAG9 804 aa17.81■□□□□ 0.44
SMIM11A-203ENST00000399299 SH2D4AQ9H788 454 aa17.81■□□□□ 0.44
SMIM11A-203ENST00000399299 ARHGEF10LQ9HCE6 1279 aa17.81■□□□□ 0.44
SMIM11A-203ENST00000399299 EPB41L4AQ9HCS5 686 aaPredicted RBP17.81■□□□□ 0.44
SMIM11A-203ENST00000399299 TXNRD2Q9NNW7 524 aa17.81■□□□□ 0.44
SMIM11A-203ENST00000399299 RBPJLQ9UBG7 517 aa17.81■□□□□ 0.44
SMIM11A-203ENST00000399299 PATL2C9JE40 543 aaKnown RBP17.8■□□□□ 0.44
SMIM11A-203ENST00000399299 EN2P19622 333 aaPredicted RBP17.8■□□□□ 0.44
SMIM11A-203ENST00000399299 ERVK-9P63128 1117 aa17.8■□□□□ 0.44
SMIM11A-203ENST00000399299 ERVK-24P63145 666 aa17.8■□□□□ 0.44
SMIM11A-203ENST00000399299 ICA1Q05084 483 aa17.8■□□□□ 0.44
SMIM11A-203ENST00000399299 LPAR1Q92633 364 aa17.8■□□□□ 0.44
SMIM11A-203ENST00000399299 EVI5LQ96CN4 794 aa17.8■□□□□ 0.44
SMIM11A-203ENST00000399299 TMX2Q9Y320 296 aa17.8■□□□□ 0.44
SMIM11A-203ENST00000399299 RABGAP1Q9Y3P9 1069 aa17.8■□□□□ 0.44
SMIM11A-203ENST00000399299 A0A0G2JMZ2 1700 aa17.8■□□□□ 0.44
SMIM11A-203ENST00000399299 RLFQ13129 1914 aa17.8■□□□□ 0.44
SMIM11A-203ENST00000399299 MKI67P46013 3256 aaKnown RBP17.8■□□□□ 0.44
SMIM11A-203ENST00000399299 MAPK4P31152 587 aa17.79■□□□□ 0.44
SMIM11A-203ENST00000399299 TDO2P48775 406 aa17.79■□□□□ 0.44
SMIM11A-203ENST00000399299 MTFR1Q15390 333 aa17.79■□□□□ 0.44
SMIM11A-203ENST00000399299 POTEEQ6S8J3 1075 aa17.79■□□□□ 0.44
SMIM11A-203ENST00000399299 SIAH1Q8IUQ4 282 aa17.79■□□□□ 0.44
SMIM11A-203ENST00000399299 SEC62Q99442 399 aaKnown RBP17.79■□□□□ 0.44
SMIM11A-203ENST00000399299 RPAP3Q9H6T3 665 aaPredicted RBP17.79■□□□□ 0.44
SMIM11A-203ENST00000399299 BIN2Q9UBW5 565 aaPredicted RBP17.79■□□□□ 0.44
SMIM11A-203ENST00000399299 GJD2Q9UKL4 321 aa17.79■□□□□ 0.44
SMIM11A-203ENST00000399299 PARP14Q460N5 1801 aa17.79■□□□□ 0.44
SMIM11A-203ENST00000399299 CCL5P13501 91 aa17.78■□□□□ 0.44
SMIM11A-203ENST00000399299 IFNL3Q8IZI9 196 aa17.78■□□□□ 0.44
SMIM11A-203ENST00000399299 SOCS4Q8WXH5 440 aa17.78■□□□□ 0.44
SMIM11A-203ENST00000399299 PAGR1Q9BTK6 254 aa17.78■□□□□ 0.44
SMIM11A-203ENST00000399299 NACAP1Q9BZK3 213 aa17.78■□□□□ 0.44
SMIM11A-203ENST00000399299 LNPKQ9C0E8 428 aa17.78■□□□□ 0.44
SMIM11A-203ENST00000399299 VCPKMTQ9H867 229 aa17.78■□□□□ 0.44
SMIM11A-203ENST00000399299 KANSL2Q9H9L4 492 aa17.78■□□□□ 0.44
SMIM11A-203ENST00000399299 SUPT16HQ9Y5B9 1047 aaKnown RBP17.78■□□□□ 0.44
SMIM11A-203ENST00000399299 SPDYE16A6NNV3 312 aaPredicted RBP17.77■□□□□ 0.44
SMIM11A-203ENST00000399299 MINDY4BA8MYZ0 360 aa17.77■□□□□ 0.44
SMIM11A-203ENST00000399299 CNMDO75829 334 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms