RNA–Protein interactions for RNA: ENST00000399273.5

CCDC144A-206, Transcript of coiled-coil domain containing 144A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC144A, Length 8,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-206ENST00000399273 CAPN2P17655 700 aa12.84□□□□□ -0.35
CCDC144A-206ENST00000399273 SKA2Q8WVK7 121 aaPredicted RBP12.84□□□□□ -0.35
CCDC144A-206ENST00000399273 USH1CQ9Y6N9 552 aa12.84□□□□□ -0.35
CCDC144A-206ENST00000399273 IFT20Q8IY31 132 aa12.84□□□□□ -0.35
CCDC144A-206ENST00000399273 MRPL50Q8N5N7 158 aaKnown RBP12.84□□□□□ -0.35
CCDC144A-206ENST00000399273 CSGALNACT2Q8N6G5 542 aa12.84□□□□□ -0.35
CCDC144A-206ENST00000399273 LLPHQ9BRT6 129 aaKnown RBP12.84□□□□□ -0.35
CCDC144A-206ENST00000399273 NT5C3AQ9H0P0 336 aa12.84□□□□□ -0.35
CCDC144A-206ENST00000399273 POLR2DO15514 142 aaKnown RBP12.84□□□□□ -0.35
CCDC144A-206ENST00000399273 HVCN1Q96D96 273 aa12.84□□□□□ -0.35
CCDC144A-206ENST00000399273 BCS1LQ9Y276 419 aa12.84□□□□□ -0.35
CCDC144A-206ENST00000399273 ZNF790Q6PG37 636 aa12.84□□□□□ -0.35
CCDC144A-206ENST00000399273 REXO1Q8N1G1 1221 aaKnown RBP12.84□□□□□ -0.35
CCDC144A-206ENST00000399273 SNX29Q8TEQ0 813 aa12.84□□□□□ -0.35
CCDC144A-206ENST00000399273 METTL22Q9BUU2 404 aaPredicted RBP12.84□□□□□ -0.35
CCDC144A-206ENST00000399273 TRIM56Q9BRZ2 755 aaKnown RBP12.84□□□□□ -0.35
CCDC144A-206ENST00000399273 PAK1Q13153 545 aa12.84□□□□□ -0.35
CCDC144A-206ENST00000399273 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.84□□□□□ -0.35
CCDC144A-206ENST00000399273 TESPA1A2RU30 521 aaPredicted RBP12.84□□□□□ -0.35
CCDC144A-206ENST00000399273 POLR2BP30876 1174 aaKnown RBP12.84□□□□□ -0.35
CCDC144A-206ENST00000399273 AK2P54819 239 aa12.84□□□□□ -0.35
CCDC144A-206ENST00000399273 MYL5Q02045 173 aa12.84□□□□□ -0.35
CCDC144A-206ENST00000399273 RHOXF2BP0C7M4 288 aa12.83□□□□□ -0.35
CCDC144A-206ENST00000399273 ITKQ08881 620 aa12.83□□□□□ -0.35
CCDC144A-206ENST00000399273 DIXDC1Q155Q3 683 aa12.83□□□□□ -0.35
CCDC144A-206ENST00000399273 DNAJC21Q5F1R6 531 aaKnown RBP12.83□□□□□ -0.35
CCDC144A-206ENST00000399273 C8orf74Q6P047 294 aa12.83□□□□□ -0.35
CCDC144A-206ENST00000399273 RHOXF2Q9BQY4 288 aa12.83□□□□□ -0.35
CCDC144A-206ENST00000399273 STAM2O75886 525 aa12.83□□□□□ -0.36
CCDC144A-206ENST00000399273 TBC1D8O95759 1140 aa12.83□□□□□ -0.36
CCDC144A-206ENST00000399273 MCF2L2Q86YR7 1114 aa12.83□□□□□ -0.36
CCDC144A-206ENST00000399273 FNBP4Q8N3X1 1017 aaPredicted RBP12.83□□□□□ -0.36
CCDC144A-206ENST00000399273 LPIN2Q92539 896 aa12.83□□□□□ -0.36
CCDC144A-206ENST00000399273 CCDC68Q9H2F9 335 aa12.83□□□□□ -0.36
CCDC144A-206ENST00000399273 VPS18Q9P253 973 aa12.83□□□□□ -0.36
CCDC144A-206ENST00000399273 CCPG1Q9ULG6 757 aa12.83□□□□□ -0.36
CCDC144A-206ENST00000399273 MAN1A1P33908 653 aa12.83□□□□□ -0.36
CCDC144A-206ENST00000399273 NBPF11Q86T75 865 aa12.83□□□□□ -0.36
CCDC144A-206ENST00000399273 MRRFQ96E11 262 aaKnown RBP12.83□□□□□ -0.36
CCDC144A-206ENST00000399273 BCAP29Q9UHQ4 241 aa12.83□□□□□ -0.36
CCDC144A-206ENST00000399273 CEP57Q86XR8 500 aa12.83□□□□□ -0.36
CCDC144A-206ENST00000399273 XPAP23025 273 aaPredicted RBP12.83□□□□□ -0.36
CCDC144A-206ENST00000399273 B4GALNT4Q76KP1 1039 aa12.83□□□□□ -0.36
CCDC144A-206ENST00000399273 CCDC170Q8IYT3 715 aa12.83□□□□□ -0.36
CCDC144A-206ENST00000399273 MMS19Q96T76 1030 aa12.83□□□□□ -0.36
CCDC144A-206ENST00000399273 PSMD6Q15008 389 aa12.83□□□□□ -0.36
CCDC144A-206ENST00000399273 MTHFSDQ2M296 383 aaKnown RBP12.83□□□□□ -0.36
CCDC144A-206ENST00000399273 HERC4Q5GLZ8 1057 aaPredicted RBP12.83□□□□□ -0.36
CCDC144A-206ENST00000399273 APPBP2Q92624 585 aa12.83□□□□□ -0.36
CCDC144A-206ENST00000399273 RBSNQ9H1K0 784 aa12.83□□□□□ -0.36
CCDC144A-206ENST00000399273 TPH2Q8IWU9 490 aa12.83□□□□□ -0.36
CCDC144A-206ENST00000399273 C10orf67Q8IYJ2 551 aa12.83□□□□□ -0.36
CCDC144A-206ENST00000399273 MCUR1Q96AQ8 359 aa12.83□□□□□ -0.36
CCDC144A-206ENST00000399273 KRT3P12035 628 aa12.82□□□□□ -0.36
CCDC144A-206ENST00000399273 TUBB2AQ13885 445 aa12.82□□□□□ -0.36
CCDC144A-206ENST00000399273 TTC38Q5R3I4 469 aa12.82□□□□□ -0.36
CCDC144A-206ENST00000399273 FAM102BQ5T8I3 360 aa12.82□□□□□ -0.36
CCDC144A-206ENST00000399273 GOLGA5Q8TBA6 731 aa12.82□□□□□ -0.36
CCDC144A-206ENST00000399273 TGFBRAP1Q8WUH2 860 aa12.82□□□□□ -0.36
CCDC144A-206ENST00000399273 HAUS8Q9BT25 410 aa12.82□□□□□ -0.36
CCDC144A-206ENST00000399273 TUBB2BQ9BVA1 445 aa12.82□□□□□ -0.36
CCDC144A-206ENST00000399273 NUCKS1Q9H1E3 243 aaKnown RBP12.82□□□□□ -0.36
CCDC144A-206ENST00000399273 PARP2Q9UGN5 583 aa12.82□□□□□ -0.36
CCDC144A-206ENST00000399273 PHBP35232 272 aa12.82□□□□□ -0.36
CCDC144A-206ENST00000399273 IRAK4Q9NWZ3 460 aa12.82□□□□□ -0.36
CCDC144A-206ENST00000399273 GPAA1O43292 621 aa12.82□□□□□ -0.36
CCDC144A-206ENST00000399273 SLFN12Q8IYM2 578 aa12.82□□□□□ -0.36
CCDC144A-206ENST00000399273 IGSF22Q8N9C0 903 aa12.82□□□□□ -0.36
CCDC144A-206ENST00000399273 PSPC1Q8WXF1 523 aaKnown RBP12.82□□□□□ -0.36
CCDC144A-206ENST00000399273 XAGE2Q96GT9 111 aa12.82□□□□□ -0.36
CCDC144A-206ENST00000399273 DDX21Q9NR30 783 aaKnown RBP eCLIP12.82□□□□□ -0.36
CCDC144A-206ENST00000399273 ST7Q9NRC1 585 aa12.82□□□□□ -0.36
CCDC144A-206ENST00000399273 ANAPC5Q9UJX4 755 aa12.82□□□□□ -0.36
CCDC144A-206ENST00000399273 PLEKHG3A1L390 1219 aa12.82□□□□□ -0.36
CCDC144A-206ENST00000399273 GIGYF1O75420 1035 aaPredicted RBP12.82□□□□□ -0.36
CCDC144A-206ENST00000399273 LIG4P49917 911 aa12.82□□□□□ -0.36
CCDC144A-206ENST00000399273 ANKRD35Q8N283 1001 aa12.82□□□□□ -0.36
CCDC144A-206ENST00000399273 TRERF1Q96PN7 1200 aa12.82□□□□□ -0.36
CCDC144A-206ENST00000399273 TTF2Q9UNY4 1162 aaKnown RBP12.82□□□□□ -0.36
CCDC144A-206ENST00000399273 ZNF131P52739 623 aa12.82□□□□□ -0.36
CCDC144A-206ENST00000399273 CCDC184Q52MB2 194 aa12.82□□□□□ -0.36
CCDC144A-206ENST00000399273 RSRC1Q96IZ7 334 aaKnown RBP12.82□□□□□ -0.36
CCDC144A-206ENST00000399273 CSRNP1Q96S65 589 aa12.82□□□□□ -0.36
CCDC144A-206ENST00000399273 CTTNBP2NLQ9P2B4 639 aa12.82□□□□□ -0.36
CCDC144A-206ENST00000399273 PTPREP23469 700 aa12.81□□□□□ -0.36
CCDC144A-206ENST00000399273 DENND2CQ68D51 928 aa12.81□□□□□ -0.36
CCDC144A-206ENST00000399273 NOP9Q86U38 636 aaKnown RBP12.81□□□□□ -0.36
CCDC144A-206ENST00000399273 ARPP21Q9UBL0 812 aaPredicted RBP12.81□□□□□ -0.36
CCDC144A-206ENST00000399273 FAM160B1Q5W0V3 765 aa12.81□□□□□ -0.36
CCDC144A-206ENST00000399273 KRT26Q7Z3Y9 468 aa12.81□□□□□ -0.36
CCDC144A-206ENST00000399273 KIF9Q9HAQ2 790 aa12.81□□□□□ -0.36
CCDC144A-206ENST00000399273 TBC1D7Q9P0N9 293 aa12.81□□□□□ -0.36
CCDC144A-206ENST00000399273 TPCN1Q9ULQ1 816 aa12.81□□□□□ -0.36
CCDC144A-206ENST00000399273 RPS6KB1P23443 525 aa12.81□□□□□ -0.36
CCDC144A-206ENST00000399273 HPDP32754 393 aaPredicted RBP12.81□□□□□ -0.36
CCDC144A-206ENST00000399273 CCNA1P78396 465 aa12.81□□□□□ -0.36
CCDC144A-206ENST00000399273 PRPSAP1Q14558 356 aa12.81□□□□□ -0.36
CCDC144A-206ENST00000399273 NONOQ15233 471 aaKnown RBP eCLIP12.81□□□□□ -0.36
CCDC144A-206ENST00000399273 MFSD14BQ5SR56 506 aa12.81□□□□□ -0.36
CCDC144A-206ENST00000399273 CCDC186Q7Z3E2 898 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms