RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 EPB41L2O43491 1005 aaKnown RBP14.7□□□□□ -0.06
HLA-DQB1-203ENST00000399082 NMT2O60551 498 aa14.7□□□□□ -0.06
HLA-DQB1-203ENST00000399082 ZBTB48P10074 688 aaPredicted RBP14.7□□□□□ -0.06
HLA-DQB1-203ENST00000399082 PCP11498 1178 aaKnown RBP14.7□□□□□ -0.06
HLA-DQB1-203ENST00000399082 TFAP4Q01664 338 aa14.7□□□□□ -0.06
HLA-DQB1-203ENST00000399082 DGKZQ13574 1117 aa14.7□□□□□ -0.06
HLA-DQB1-203ENST00000399082 MOGSQ13724 837 aa14.7□□□□□ -0.06
HLA-DQB1-203ENST00000399082 RAB3GAP1Q15042 981 aa14.7□□□□□ -0.06
HLA-DQB1-203ENST00000399082 RRP12Q5JTH9 1297 aaKnown RBP14.7□□□□□ -0.06
HLA-DQB1-203ENST00000399082 MFSD6Q6ZSS7 791 aa14.7□□□□□ -0.06
HLA-DQB1-203ENST00000399082 PAXIP1Q6ZW49 1069 aaPredicted RBP14.7□□□□□ -0.06
HLA-DQB1-203ENST00000399082 MS4A4AQ96JQ5 239 aa14.7□□□□□ -0.06
HLA-DQB1-203ENST00000399082 WDR18Q9BV38 432 aa14.7□□□□□ -0.06
HLA-DQB1-203ENST00000399082 RNF41Q9H4P4 317 aaPredicted RBP14.7□□□□□ -0.06
HLA-DQB1-203ENST00000399082 IL17RBQ9NRM6 502 aa14.7□□□□□ -0.06
HLA-DQB1-203ENST00000399082 ECE1P42892 770 aa14.69□□□□□ -0.06
HLA-DQB1-203ENST00000399082 NOVP48745 357 aa14.69□□□□□ -0.06
HLA-DQB1-203ENST00000399082 GRM1Q13255 1194 aa14.69□□□□□ -0.06
HLA-DQB1-203ENST00000399082 ADCK5Q3MIX3 580 aa14.69□□□□□ -0.06
HLA-DQB1-203ENST00000399082 TSGA10IPQ3SY00 556 aa14.69□□□□□ -0.06
HLA-DQB1-203ENST00000399082 CYB5R4Q7L1T6 521 aa14.69□□□□□ -0.06
HLA-DQB1-203ENST00000399082 ZNF444Q8N0Y2 327 aaPredicted RBP14.69□□□□□ -0.06
HLA-DQB1-203ENST00000399082 CCDC102AQ96A19 550 aa14.69□□□□□ -0.06
HLA-DQB1-203ENST00000399082 CEP95Q96GE4 821 aa14.69□□□□□ -0.06
HLA-DQB1-203ENST00000399082 ZNF287Q9HBT7 754 aa14.69□□□□□ -0.06
HLA-DQB1-203ENST00000399082 CABP5Q9NP86 173 aa14.69□□□□□ -0.06
HLA-DQB1-203ENST00000399082 SNX14Q9Y5W7 946 aa14.69□□□□□ -0.06
HLA-DQB1-203ENST00000399082 MYH4Q9Y623 1939 aa14.68□□□□□ -0.06
HLA-DQB1-203ENST00000399082 TRIM75PA6NK02 468 aa14.68□□□□□ -0.06
HLA-DQB1-203ENST00000399082 TSPY2A6NKD2 308 aa14.68□□□□□ -0.06
HLA-DQB1-203ENST00000399082 RANBP6O60518 1105 aaKnown RBP14.68□□□□□ -0.06
HLA-DQB1-203ENST00000399082 KDM4AO75164 1064 aa14.68□□□□□ -0.06
HLA-DQB1-203ENST00000399082 ANTXR2P58335 489 aa14.68□□□□□ -0.06
HLA-DQB1-203ENST00000399082 ICA1Q05084 483 aa14.68□□□□□ -0.06
HLA-DQB1-203ENST00000399082 SPP2Q13103 211 aa14.68□□□□□ -0.06
HLA-DQB1-203ENST00000399082 RCSD1Q6JBY9 416 aa14.68□□□□□ -0.06
HLA-DQB1-203ENST00000399082 MB21D2Q8IYB1 491 aaPredicted RBP14.68□□□□□ -0.06
HLA-DQB1-203ENST00000399082 ZNF280CQ8ND82 737 aa14.68□□□□□ -0.06
HLA-DQB1-203ENST00000399082 BRI3BPQ8WY22 251 aa14.68□□□□□ -0.06
HLA-DQB1-203ENST00000399082 TOMM22Q9NS69 142 aa14.68□□□□□ -0.06
HLA-DQB1-203ENST00000399082 MTMR4Q9NYA4 1195 aa14.68□□□□□ -0.06
HLA-DQB1-203ENST00000399082 ZSWIM5Q9P217 1185 aa14.68□□□□□ -0.06
HLA-DQB1-203ENST00000399082 A0A0G2JLL6 359 aaPredicted RBP14.67□□□□□ -0.06
HLA-DQB1-203ENST00000399082 TESPA1A2RU30 521 aaPredicted RBP14.67□□□□□ -0.06
HLA-DQB1-203ENST00000399082 CXCL11O14625 94 aa14.67□□□□□ -0.06
HLA-DQB1-203ENST00000399082 TSPY3P0CV98 308 aa14.67□□□□□ -0.06
HLA-DQB1-203ENST00000399082 TSPY8P0CW00 308 aa14.67□□□□□ -0.06
HLA-DQB1-203ENST00000399082 EEF2P13639 858 aaKnown RBP14.67□□□□□ -0.06
HLA-DQB1-203ENST00000399082 KIF23Q02241 960 aaPredicted RBP14.67□□□□□ -0.06
HLA-DQB1-203ENST00000399082 NOGQ13253 232 aa14.67□□□□□ -0.06
HLA-DQB1-203ENST00000399082 MTMR2Q13614 643 aa14.67□□□□□ -0.06
HLA-DQB1-203ENST00000399082 SH3D19Q5HYK7 790 aa14.67□□□□□ -0.06
HLA-DQB1-203ENST00000399082 KIAA1755Q5JYT7 1200 aa14.67□□□□□ -0.06
HLA-DQB1-203ENST00000399082 PRRT2Q7Z6L0 340 aaPredicted RBP14.67□□□□□ -0.06
HLA-DQB1-203ENST00000399082 ESR2Q92731 530 aa14.67□□□□□ -0.06
HLA-DQB1-203ENST00000399082 PTPN18Q99952 460 aa14.67□□□□□ -0.06
HLA-DQB1-203ENST00000399082 CNNM2Q9H8M5 875 aa14.67□□□□□ -0.06
HLA-DQB1-203ENST00000399082 ZKSCAN3Q9BRR0 538 aa14.66□□□□□ -0.06
HLA-DQB1-203ENST00000399082 TBC1D2Q9BYX2 928 aa14.66□□□□□ -0.06
HLA-DQB1-203ENST00000399082 KRT23Q9C075 422 aa14.66□□□□□ -0.06
HLA-DQB1-203ENST00000399082 KANSL2Q9H9L4 492 aa14.66□□□□□ -0.06
HLA-DQB1-203ENST00000399082 AS3MTQ9HBK9 375 aa14.66□□□□□ -0.06
HLA-DQB1-203ENST00000399082 EMILIN3Q9NT22 766 aa14.66□□□□□ -0.06
HLA-DQB1-203ENST00000399082 TCP11L1Q9NUJ3 509 aa14.66□□□□□ -0.06
HLA-DQB1-203ENST00000399082 NYAP2Q9P242 653 aa14.66□□□□□ -0.06
HLA-DQB1-203ENST00000399082 IGF2BP3O00425 579 aaKnown RBP eCLIP14.65□□□□□ -0.06
HLA-DQB1-203ENST00000399082 NT5C2P49902 561 aa14.65□□□□□ -0.06
HLA-DQB1-203ENST00000399082 HMGCS2P54868 508 aa14.65□□□□□ -0.06
HLA-DQB1-203ENST00000399082 BACE1P56817 501 aa14.65□□□□□ -0.06
HLA-DQB1-203ENST00000399082 SNAPC2Q13487 334 aa14.65□□□□□ -0.06
HLA-DQB1-203ENST00000399082 SEC23AQ15436 765 aa14.65□□□□□ -0.06
HLA-DQB1-203ENST00000399082 ZYXQ15942 572 aaKnown RBP14.65□□□□□ -0.06
HLA-DQB1-203ENST00000399082 RNF20Q5VTR2 975 aa14.65□□□□□ -0.06
HLA-DQB1-203ENST00000399082 GPAT2Q6NUI2 795 aa14.65□□□□□ -0.06
HLA-DQB1-203ENST00000399082 CHST3Q7LGC8 479 aa14.65□□□□□ -0.06
HLA-DQB1-203ENST00000399082 NCOA7Q8NI08 942 aa14.65□□□□□ -0.06
HLA-DQB1-203ENST00000399082 IL17RAQ96F46 866 aa14.65□□□□□ -0.06
HLA-DQB1-203ENST00000399082 C12orf42Q96LP6 360 aa14.65□□□□□ -0.06
HLA-DQB1-203ENST00000399082 BACH2Q9BYV9 841 aa14.65□□□□□ -0.06
HLA-DQB1-203ENST00000399082 KIAA1683Q9H0B3 1180 aa14.65□□□□□ -0.06
HLA-DQB1-203ENST00000399082 TMX2Q9Y320 296 aa14.65□□□□□ -0.06
HLA-DQB1-203ENST00000399082 CCL15-CCL14A0A0B4J2E2 113 aa14.64□□□□□ -0.07
HLA-DQB1-203ENST00000399082 MANSC4A6NHS7 340 aaPredicted RBP14.64□□□□□ -0.07
HLA-DQB1-203ENST00000399082 USP17L10C9JJH3 530 aa14.64□□□□□ -0.07
HLA-DQB1-203ENST00000399082 CPA1P15085 419 aa14.64□□□□□ -0.07
HLA-DQB1-203ENST00000399082 MAP2K2P36507 400 aa14.64□□□□□ -0.07
HLA-DQB1-203ENST00000399082 GTF2A2P52657 109 aa14.64□□□□□ -0.07
HLA-DQB1-203ENST00000399082 CCL15Q16663 113 aa14.64□□□□□ -0.07
HLA-DQB1-203ENST00000399082 ENAHQ8N8S7 591 aaPredicted RBP14.64□□□□□ -0.07
HLA-DQB1-203ENST00000399082 MKL1Q969V6 931 aa14.64□□□□□ -0.07
HLA-DQB1-203ENST00000399082 SENP2Q9HC62 589 aa14.64□□□□□ -0.07
HLA-DQB1-203ENST00000399082 GPHNQ9NQX3 736 aaPredicted RBP14.64□□□□□ -0.07
HLA-DQB1-203ENST00000399082 CLIP2Q9UDT6 1046 aa14.64□□□□□ -0.07
HLA-DQB1-203ENST00000399082 TNKSO95271 1327 aa14.64□□□□□ -0.07
HLA-DQB1-203ENST00000399082 BTBD19C9JJ37 291 aa14.63□□□□□ -0.07
HLA-DQB1-203ENST00000399082 TTLL1O95922 423 aa14.63□□□□□ -0.07
HLA-DQB1-203ENST00000399082 CETPP11597 493 aa14.63□□□□□ -0.07
HLA-DQB1-203ENST00000399082 ZKSCAN1P17029 563 aaPredicted RBP14.63□□□□□ -0.07
HLA-DQB1-203ENST00000399082 TM4SF4P48230 202 aa14.63□□□□□ -0.07
HLA-DQB1-203ENST00000399082 EXOSC10Q01780 885 aaKnown RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms