RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 COL5A2P05997 1499 aaPredicted RBP15.88■□□□□ 0.13
NUP98-204ENST00000397004 BCORQ6W2J9 1755 aa15.88■□□□□ 0.13
NUP98-204ENST00000397004 MYH8P13535 1937 aa15.88■□□□□ 0.13
NUP98-204ENST00000397004 ZNF579Q8NAF0 562 aaKnown RBP15.88■□□□□ 0.13
NUP98-204ENST00000397004 SPATA5Q8NB90 893 aa15.88■□□□□ 0.13
NUP98-204ENST00000397004 PAGE5Q96GU1 130 aa15.88■□□□□ 0.13
NUP98-204ENST00000397004 CDHR2Q9BYE9 1310 aa15.88■□□□□ 0.13
NUP98-204ENST00000397004 MYH3P11055 1940 aa15.88■□□□□ 0.13
NUP98-204ENST00000397004 AKR1B15C9JRZ8 316 aaPredicted RBP15.88■□□□□ 0.13
NUP98-204ENST00000397004 IRS4O14654 1257 aaPredicted RBP15.88■□□□□ 0.13
NUP98-204ENST00000397004 VPS54Q9P1Q0 977 aa15.88■□□□□ 0.13
NUP98-204ENST00000397004 ADAM21Q9UKJ8 722 aa15.88■□□□□ 0.13
NUP98-204ENST00000397004 VGLL3A8MV65 326 aa15.88■□□□□ 0.13
NUP98-204ENST00000397004 ATP8B1O43520 1251 aa15.88■□□□□ 0.13
NUP98-204ENST00000397004 ARHGAP25P42331 645 aa15.88■□□□□ 0.13
NUP98-204ENST00000397004 IGSF22Q8N9C0 903 aa15.88■□□□□ 0.13
NUP98-204ENST00000397004 MIGA1Q8NAN2 632 aa15.88■□□□□ 0.13
NUP98-204ENST00000397004 PANX2Q96RD6 677 aa15.88■□□□□ 0.13
NUP98-204ENST00000397004 NAPBQ9H115 298 aa15.88■□□□□ 0.13
NUP98-204ENST00000397004 RTN1Q16799 776 aa15.87■□□□□ 0.13
NUP98-204ENST00000397004 ARFGAP3Q9NP61 516 aa15.87■□□□□ 0.13
NUP98-204ENST00000397004 TTF1Q15361 905 aaPredicted RBP15.87■□□□□ 0.13
NUP98-204ENST00000397004 IL17AQ16552 155 aa15.87■□□□□ 0.13
NUP98-204ENST00000397004 RILPL1Q5EBL4 403 aa15.87■□□□□ 0.13
NUP98-204ENST00000397004 CPLX2Q6PUV4 134 aaKnown RBP15.87■□□□□ 0.13
NUP98-204ENST00000397004 BBXQ8WY36 941 aaPredicted RBP15.87■□□□□ 0.13
NUP98-204ENST00000397004 RASGRP2Q7LDG7 609 aa15.87■□□□□ 0.13
NUP98-204ENST00000397004 FANCBQ8NB91 859 aa15.87■□□□□ 0.13
NUP98-204ENST00000397004 SYMPKQ92797 1274 aaKnown RBP15.87■□□□□ 0.13
NUP98-204ENST00000397004 TFR2Q9UP52 801 aa15.87■□□□□ 0.13
NUP98-204ENST00000397004 BAZ2BQ9UIF8 2168 aaKnown RBP15.86■□□□□ 0.13
NUP98-204ENST00000397004 ANKRD18BA2A2Z9 1011 aa15.86■□□□□ 0.13
NUP98-204ENST00000397004 MFAP3LO75121 409 aa15.86■□□□□ 0.13
NUP98-204ENST00000397004 SEC23AQ15436 765 aa15.86■□□□□ 0.13
NUP98-204ENST00000397004 STAG1Q8WVM7 1258 aa15.86■□□□□ 0.13
NUP98-204ENST00000397004 CALCOCO1Q9P1Z2 691 aa15.86■□□□□ 0.13
NUP98-204ENST00000397004 TRIM10Q9UDY6 481 aa15.86■□□□□ 0.13
NUP98-204ENST00000397004 ERCC5P28715 1186 aaPredicted RBP15.86■□□□□ 0.13
NUP98-204ENST00000397004 CHMP4BP1P59074 171 aa15.86■□□□□ 0.13
NUP98-204ENST00000397004 SRGAP1Q7Z6B7 1085 aa15.86■□□□□ 0.13
NUP98-204ENST00000397004 CREBRFQ8IUR6 639 aa15.86■□□□□ 0.13
NUP98-204ENST00000397004 GOLGA1Q92805 767 aa15.86■□□□□ 0.13
NUP98-204ENST00000397004 LRP5O75197 1615 aa15.86■□□□□ 0.13
NUP98-204ENST00000397004 XDHP47989 1333 aa15.86■□□□□ 0.13
NUP98-204ENST00000397004 BCAMP50895 628 aa15.86■□□□□ 0.13
NUP98-204ENST00000397004 SPATA1Q5VX52 437 aa15.86■□□□□ 0.13
NUP98-204ENST00000397004 FOXR1Q6PIV2 292 aa15.86■□□□□ 0.13
NUP98-204ENST00000397004 SLC35F6Q8N357 371 aa15.86■□□□□ 0.13
NUP98-204ENST00000397004 NOA1Q8NC60 698 aaKnown RBP15.86■□□□□ 0.13
NUP98-204ENST00000397004 NUP133Q8WUM0 1156 aa15.86■□□□□ 0.13
NUP98-204ENST00000397004 PDE11AQ9HCR9 933 aa15.86■□□□□ 0.13
NUP98-204ENST00000397004 CCDC175P0C221 793 aa15.85■□□□□ 0.13
NUP98-204ENST00000397004 FECHP22830 423 aa15.85■□□□□ 0.13
NUP98-204ENST00000397004 MFSD6Q6ZSS7 791 aa15.85■□□□□ 0.13
NUP98-204ENST00000397004 ZNF654Q8IZM8 581 aa15.85■□□□□ 0.13
NUP98-204ENST00000397004 SDR42E1Q8WUS8 393 aa15.85■□□□□ 0.13
NUP98-204ENST00000397004 RAB21Q9UL25 225 aa15.85■□□□□ 0.13
NUP98-204ENST00000397004 REXO2Q9Y3B8 237 aaKnown RBP15.85■□□□□ 0.13
NUP98-204ENST00000397004 COL16A1Q07092 1604 aaPredicted RBP15.85■□□□□ 0.13
NUP98-204ENST00000397004 PLEKHA8P1O95397 391 aa15.85■□□□□ 0.13
NUP98-204ENST00000397004 CCT6AP40227 531 aaKnown RBP15.85■□□□□ 0.13
NUP98-204ENST00000397004 VSNL1P62760 191 aa15.85■□□□□ 0.13
NUP98-204ENST00000397004 TRIML1Q8N9V2 468 aa15.85■□□□□ 0.13
NUP98-204ENST00000397004 ABCB6Q9NP58 842 aa15.85■□□□□ 0.13
NUP98-204ENST00000397004 MYH6P13533 1939 aa15.85■□□□□ 0.13
NUP98-204ENST00000397004 CYP2D7A0A087X1C5 515 aa15.85■□□□□ 0.13
NUP98-204ENST00000397004 CCDC151A5D8V7 595 aa15.85■□□□□ 0.13
NUP98-204ENST00000397004 IL2RBP14784 551 aa15.85■□□□□ 0.13
NUP98-204ENST00000397004 ZNF569Q5MCW4 686 aa15.85■□□□□ 0.13
NUP98-204ENST00000397004 TNFRSF25Q93038 417 aa15.85■□□□□ 0.13
NUP98-204ENST00000397004 BLZF1Q9H2G9 400 aa15.85■□□□□ 0.13
NUP98-204ENST00000397004 FEZ2Q9UHY8 353 aaPredicted RBP15.85■□□□□ 0.13
NUP98-204ENST00000397004 L1RE1Q9UN81 338 aa15.85■□□□□ 0.13
NUP98-204ENST00000397004 ZBTB1Q9Y2K1 713 aa15.85■□□□□ 0.13
NUP98-204ENST00000397004 ARAP2Q8WZ64 1704 aa15.84■□□□□ 0.13
NUP98-204ENST00000397004 TPM1P09493 284 aa15.84■□□□□ 0.13
NUP98-204ENST00000397004 WTAPQ15007 396 aa15.84■□□□□ 0.13
NUP98-204ENST00000397004 GOLGA6L9A6NEM1 432 aa15.84■□□□□ 0.13
NUP98-204ENST00000397004 DEXIO95424 95 aa15.84■□□□□ 0.13
NUP98-204ENST00000397004 AATFQ9NY61 560 aaKnown RBP eCLIP15.84■□□□□ 0.13
NUP98-204ENST00000397004 CDC23Q9UJX2 597 aa15.84■□□□□ 0.13
NUP98-204ENST00000397004 SYNRGQ9UMZ2 1314 aa15.84■□□□□ 0.13
NUP98-204ENST00000397004 NUP98P52948 1817 aa15.84■□□□□ 0.13
NUP98-204ENST00000397004 TRIM66O15016 1216 aa15.84■□□□□ 0.13
NUP98-204ENST00000397004 MAPK8IP2Q13387 824 aaPredicted RBP15.84■□□□□ 0.13
NUP98-204ENST00000397004 KIF6Q6ZMV9 814 aa15.84■□□□□ 0.13
NUP98-204ENST00000397004 MSANTD4Q8NCY6 345 aa15.84■□□□□ 0.13
NUP98-204ENST00000397004 PHF20Q9BVI0 1012 aa15.84■□□□□ 0.13
NUP98-204ENST00000397004 PRDM11Q9NQV5 511 aa15.84■□□□□ 0.13
NUP98-204ENST00000397004 TRMT112Q9UI30 125 aaKnown RBP15.84■□□□□ 0.13
NUP98-204ENST00000397004 TBC1D2BQ9UPU7 963 aa15.84■□□□□ 0.13
NUP98-204ENST00000397004 USP5P45974 858 aa15.83■□□□□ 0.13
NUP98-204ENST00000397004 MCM6Q14566 821 aa15.83■□□□□ 0.13
NUP98-204ENST00000397004 E2F4Q16254 413 aa15.83■□□□□ 0.13
NUP98-204ENST00000397004 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.83■□□□□ 0.13
NUP98-204ENST00000397004 LPIN2Q92539 896 aa15.83■□□□□ 0.13
NUP98-204ENST00000397004 CHP1Q99653 195 aa15.83■□□□□ 0.13
NUP98-204ENST00000397004 TOMM22Q9NS69 142 aa15.83■□□□□ 0.13
NUP98-204ENST00000397004 SLC4A4Q9Y6R1 1079 aa15.83■□□□□ 0.13
NUP98-204ENST00000397004 MYH2Q9UKX2 1941 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms