RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 PCDH11XQ9BZA7 1347 aa27.19■■□□□ 1.94
CSNK1E-203ENST00000396832 PCDH11YQ9BZA8 1340 aa27.19■■□□□ 1.94
CSNK1E-203ENST00000396832 CTAGE15A4D2H0 777 aa27.19■■□□□ 1.94
CSNK1E-203ENST00000396832 CTAGE8P0CG41 777 aa27.19■■□□□ 1.94
CSNK1E-203ENST00000396832 CTAGE6Q86UF2 777 aa27.19■■□□□ 1.94
CSNK1E-203ENST00000396832 CTAGE4Q8IX94 777 aa27.19■■□□□ 1.94
CSNK1E-203ENST00000396832 IFNL3Q8IZI9 196 aa27.19■■□□□ 1.94
CSNK1E-203ENST00000396832 PRDM11Q9NQV5 511 aa27.19■■□□□ 1.94
CSNK1E-203ENST00000396832 A0A1B0GTH6 734 aa27.19■■□□□ 1.94
CSNK1E-203ENST00000396832 ABL1P00519 1130 aa27.19■■□□□ 1.94
CSNK1E-203ENST00000396832 TICAM2Q86XR7 235 aa27.19■■□□□ 1.94
CSNK1E-203ENST00000396832 RGS22Q8NE09 1264 aa27.19■■□□□ 1.94
CSNK1E-203ENST00000396832 TMEM87BQ96K49 555 aa27.19■■□□□ 1.94
CSNK1E-203ENST00000396832 NAA15Q9BXJ9 866 aaKnown RBP27.19■■□□□ 1.94
CSNK1E-203ENST00000396832 IQSEC3Q9UPP2 1182 aaPredicted RBP27.19■■□□□ 1.94
CSNK1E-203ENST00000396832 A0A087X0B3 334 aa27.18■■□□□ 1.94
CSNK1E-203ENST00000396832 PRDM1O75626 825 aa27.18■■□□□ 1.94
CSNK1E-203ENST00000396832 ZBTB38Q8NAP3 1195 aaPredicted RBP27.18■■□□□ 1.94
CSNK1E-203ENST00000396832 ALS2Q96Q42 1657 aa27.18■■□□□ 1.94
CSNK1E-203ENST00000396832 MED4Q9NPJ6 270 aa27.18■■□□□ 1.94
CSNK1E-203ENST00000396832 WDR19Q8NEZ3 1342 aa27.18■■□□□ 1.94
CSNK1E-203ENST00000396832 RASGRP2Q7LDG7 609 aa27.18■■□□□ 1.94
CSNK1E-203ENST00000396832 IGSF22Q8N9C0 903 aa27.18■■□□□ 1.94
CSNK1E-203ENST00000396832 DRC1Q96MC2 740 aa27.18■■□□□ 1.94
CSNK1E-203ENST00000396832 CDC5LQ99459 802 aaKnown RBP27.18■■□□□ 1.94
CSNK1E-203ENST00000396832 FMNL1O95466 1100 aaPredicted RBP27.17■■□□□ 1.94
CSNK1E-203ENST00000396832 PCCAP05165 728 aaPredicted RBP27.17■■□□□ 1.94
CSNK1E-203ENST00000396832 CCT6AP40227 531 aaKnown RBP27.17■■□□□ 1.94
CSNK1E-203ENST00000396832 TDO2P48775 406 aa27.17■■□□□ 1.94
CSNK1E-203ENST00000396832 MORC3Q14149 939 aa27.17■■□□□ 1.94
CSNK1E-203ENST00000396832 RTN1Q16799 776 aa27.17■■□□□ 1.94
CSNK1E-203ENST00000396832 ACBD3Q9H3P7 528 aa27.17■■□□□ 1.94
CSNK1E-203ENST00000396832 CD44P16070 742 aaKnown RBP27.17■■□□□ 1.94
CSNK1E-203ENST00000396832 ELOA2Q8IYF1 753 aaPredicted RBP27.16■■□□□ 1.94
CSNK1E-203ENST00000396832 ANKRD18BA2A2Z9 1011 aa27.16■■□□□ 1.94
CSNK1E-203ENST00000396832 PTPREP23469 700 aa27.16■■□□□ 1.94
CSNK1E-203ENST00000396832 PIP4K2BP78356 416 aa27.16■■□□□ 1.94
CSNK1E-203ENST00000396832 TRIM22Q8IYM9 498 aa27.16■■□□□ 1.94
CSNK1E-203ENST00000396832 NOA1Q8NC60 698 aaKnown RBP27.16■■□□□ 1.94
CSNK1E-203ENST00000396832 VPS54Q9P1Q0 977 aa27.16■■□□□ 1.94
CSNK1E-203ENST00000396832 KCPQ6ZWJ8 1503 aa27.16■■□□□ 1.94
CSNK1E-203ENST00000396832 COL18A1P39060 1754 aa27.16■■□□□ 1.94
CSNK1E-203ENST00000396832 SARSP49591 514 aaKnown RBP27.15■■□□□ 1.94
CSNK1E-203ENST00000396832 EARS2Q5JPH6 523 aaKnown RBP27.15■■□□□ 1.94
CSNK1E-203ENST00000396832 NT5DC1Q5TFE4 455 aa27.15■■□□□ 1.94
CSNK1E-203ENST00000396832 WNT7AO00755 349 aa27.15■■□□□ 1.94
CSNK1E-203ENST00000396832 ACTN4O43707 911 aaKnown RBP27.15■■□□□ 1.94
CSNK1E-203ENST00000396832 PPFIA4O75335 1185 aa27.15■■□□□ 1.94
CSNK1E-203ENST00000396832 MFSD6Q6ZSS7 791 aa27.15■■□□□ 1.94
CSNK1E-203ENST00000396832 ACRBPQ8NEB7 543 aa27.15■■□□□ 1.94
CSNK1E-203ENST00000396832 NAPGQ99747 312 aaPredicted RBP27.15■■□□□ 1.94
CSNK1E-203ENST00000396832 RNF216Q9NWF9 866 aaPredicted RBP27.15■■□□□ 1.94
CSNK1E-203ENST00000396832 TRMT112Q9UI30 125 aaKnown RBP27.15■■□□□ 1.94
CSNK1E-203ENST00000396832 TCRBV5S4A2TA0A5A2 114 aa27.14■■□□□ 1.94
CSNK1E-203ENST00000396832 RNF40O75150 1001 aa27.14■■□□□ 1.94
CSNK1E-203ENST00000396832 CSF1RP07333 972 aa27.14■■□□□ 1.94
CSNK1E-203ENST00000396832 CDC25AP30304 524 aa27.14■■□□□ 1.94
CSNK1E-203ENST00000396832 WHAMMP3Q1A5X7 153 aa27.14■■□□□ 1.94
CSNK1E-203ENST00000396832 IRS4O14654 1257 aaPredicted RBP27.14■■□□□ 1.94
CSNK1E-203ENST00000396832 WTAPQ15007 396 aa27.14■■□□□ 1.94
CSNK1E-203ENST00000396832 UBE3CQ15386 1083 aa27.14■■□□□ 1.94
CSNK1E-203ENST00000396832 SGMS1Q86VZ5 419 aa27.14■■□□□ 1.94
CSNK1E-203ENST00000396832 LCORLQ8N3X6 602 aa27.14■■□□□ 1.94
CSNK1E-203ENST00000396832 TUBBP07437 444 aa27.14■■□□□ 1.93
CSNK1E-203ENST00000396832 CTSWP56202 376 aa27.14■■□□□ 1.93
CSNK1E-203ENST00000396832 SKIDA1Q1XH10 827 aa27.14■■□□□ 1.93
CSNK1E-203ENST00000396832 PDE8BO95263 885 aa27.13■■□□□ 1.93
CSNK1E-203ENST00000396832 CASP14P31944 242 aa27.13■■□□□ 1.93
CSNK1E-203ENST00000396832 TTF1Q15361 905 aaPredicted RBP27.13■■□□□ 1.93
CSNK1E-203ENST00000396832 PKD1L3Q7Z443 1732 aa27.13■■□□□ 1.93
CSNK1E-203ENST00000396832 RASGRF1Q13972 1273 aa27.13■■□□□ 1.93
CSNK1E-203ENST00000396832 AFAP1L1Q8TED9 768 aa27.13■■□□□ 1.93
CSNK1E-203ENST00000396832 SYNRGQ9UMZ2 1314 aa27.12■■□□□ 1.93
CSNK1E-203ENST00000396832 MINDY4BA8MYZ0 360 aa27.12■■□□□ 1.93
CSNK1E-203ENST00000396832 IFNAR1P17181 557 aa27.12■■□□□ 1.93
CSNK1E-203ENST00000396832 PLCD1P51178 756 aa27.12■■□□□ 1.93
CSNK1E-203ENST00000396832 AKNAD1Q5T1N1 836 aa27.12■■□□□ 1.93
CSNK1E-203ENST00000396832 APTXQ7Z2E3 356 aaKnown RBP27.12■■□□□ 1.93
CSNK1E-203ENST00000396832 SHISA4Q96DD7 197 aa27.12■■□□□ 1.93
CSNK1E-203ENST00000396832 DEF6Q9H4E7 631 aa27.12■■□□□ 1.93
CSNK1E-203ENST00000396832 MYH8P13535 1937 aa27.12■■□□□ 1.93
CSNK1E-203ENST00000396832 MFAP3LO75121 409 aa27.12■■□□□ 1.93
CSNK1E-203ENST00000396832 EFCAB13Q8IY85 973 aa27.12■■□□□ 1.93
CSNK1E-203ENST00000396832 VGLL2Q8N8G2 317 aa27.12■■□□□ 1.93
CSNK1E-203ENST00000396832 BLZF1Q9H2G9 400 aa27.12■■□□□ 1.93
CSNK1E-203ENST00000396832 TMOD3Q9NYL9 352 aa27.12■■□□□ 1.93
CSNK1E-203ENST00000396832 TTF2Q9UNY4 1162 aaKnown RBP27.12■■□□□ 1.93
CSNK1E-203ENST00000396832 SLC4A4Q9Y6R1 1079 aa27.12■■□□□ 1.93
CSNK1E-203ENST00000396832 SYF2O95926 243 aaKnown RBP27.11■■□□□ 1.93
CSNK1E-203ENST00000396832 DNAJC21Q5F1R6 531 aaKnown RBP27.11■■□□□ 1.93
CSNK1E-203ENST00000396832 ERVV-2B6SEH9 535 aa27.11■■□□□ 1.93
CSNK1E-203ENST00000396832 RILPL1Q5EBL4 403 aa27.11■■□□□ 1.93
CSNK1E-203ENST00000396832 WDR93Q6P2C0 686 aa27.11■■□□□ 1.93
CSNK1E-203ENST00000396832 NLRP10Q86W26 655 aa27.11■■□□□ 1.93
CSNK1E-203ENST00000396832 LOC102724159A0A0B4J2E5 919 aa27.1■■□□□ 1.93
CSNK1E-203ENST00000396832 PWP2Q15269 919 aaKnown RBP27.1■■□□□ 1.93
CSNK1E-203ENST00000396832 NCAPH2Q6IBW4 605 aa27.1■■□□□ 1.93
CSNK1E-203ENST00000396832 TRIML1Q8N9V2 468 aa27.1■■□□□ 1.93
CSNK1E-203ENST00000396832 SPATA5Q8NB90 893 aa27.1■■□□□ 1.93
CSNK1E-203ENST00000396832 SDR42E1Q8WUS8 393 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms