RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 PNMA1Q8ND90 353 aa18.54■□□□□ 0.56
SNX6-202ENST00000396526 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.53■□□□□ 0.56
SNX6-202ENST00000396526 RIMBP2O15034 1052 aa18.53■□□□□ 0.56
SNX6-202ENST00000396526 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.53■□□□□ 0.56
SNX6-202ENST00000396526 MASTLQ96GX5 879 aa18.53■□□□□ 0.56
SNX6-202ENST00000396526 TCP11L1Q9NUJ3 509 aa18.53■□□□□ 0.56
SNX6-202ENST00000396526 UBE2Q2LH0YL09 131 aa18.53■□□□□ 0.56
SNX6-202ENST00000396526 SRGNP10124 158 aa18.53■□□□□ 0.56
SNX6-202ENST00000396526 CNNM3Q8NE01 707 aa18.53■□□□□ 0.56
SNX6-202ENST00000396526 ANKS1AQ92625 1134 aa18.53■□□□□ 0.56
SNX6-202ENST00000396526 MMP10P09238 476 aa18.53■□□□□ 0.56
SNX6-202ENST00000396526 SCG2P13521 617 aa18.53■□□□□ 0.56
SNX6-202ENST00000396526 RESP18Q5W5W9 173 aa18.53■□□□□ 0.56
SNX6-202ENST00000396526 SAP30BPQ9UHR5 308 aaKnown RBP18.53■□□□□ 0.56
SNX6-202ENST00000396526 KCNH3Q9ULD8 1083 aa18.53■□□□□ 0.56
SNX6-202ENST00000396526 STX8Q9UNK0 236 aa18.53■□□□□ 0.56
SNX6-202ENST00000396526 MYH2Q9UKX2 1941 aa18.52■□□□□ 0.56
SNX6-202ENST00000396526 MAST2Q6P0Q8 1798 aa18.52■□□□□ 0.56
SNX6-202ENST00000396526 NMT2O60551 498 aa18.52■□□□□ 0.56
SNX6-202ENST00000396526 RXRBP28702 533 aa18.52■□□□□ 0.56
SNX6-202ENST00000396526 NR5A1Q13285 461 aa18.52■□□□□ 0.56
SNX6-202ENST00000396526 DYNLL2Q96FJ2 89 aa18.52■□□□□ 0.56
SNX6-202ENST00000396526 LZTS2Q9BRK4 669 aa18.52■□□□□ 0.56
SNX6-202ENST00000396526 SMTNL1A8MU46 457 aa18.52■□□□□ 0.56
SNX6-202ENST00000396526 PHF20Q9BVI0 1012 aa18.52■□□□□ 0.56
SNX6-202ENST00000396526 FUT2Q10981 343 aa18.51■□□□□ 0.55
SNX6-202ENST00000396526 KANK3Q6NY19 840 aa18.51■□□□□ 0.55
SNX6-202ENST00000396526 ZNF579Q8NAF0 562 aaKnown RBP18.51■□□□□ 0.55
SNX6-202ENST00000396526 AKT1S1Q96B36 256 aa18.51■□□□□ 0.55
SNX6-202ENST00000396526 ROBO3Q96MS0 1386 aa18.51■□□□□ 0.55
SNX6-202ENST00000396526 PTPREP23469 700 aa18.51■□□□□ 0.55
SNX6-202ENST00000396526 SPC24Q8NBT2 197 aa18.51■□□□□ 0.55
SNX6-202ENST00000396526 ZNF622Q969S3 477 aaKnown RBP eCLIP18.51■□□□□ 0.554e-7■■□□□ 11.4
SNX6-202ENST00000396526 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.51■□□□□ 0.559e-6■□□□□ 11.3
SNX6-202ENST00000396526 FAM237AA0A1B0GTK4 181 aa18.51■□□□□ 0.55
SNX6-202ENST00000396526 GRIK5Q16478 980 aa18.51■□□□□ 0.55
SNX6-202ENST00000396526 PKN1Q16512 942 aa18.51■□□□□ 0.55
SNX6-202ENST00000396526 ZNF827Q17R98 1081 aa18.51■□□□□ 0.55
SNX6-202ENST00000396526 NLRP12P59046 1061 aa18.5■□□□□ 0.55
SNX6-202ENST00000396526 SHC4Q6S5L8 630 aa18.5■□□□□ 0.55
SNX6-202ENST00000396526 SRBD1Q8N5C6 995 aaKnown RBP18.5■□□□□ 0.55
SNX6-202ENST00000396526 NAP1L5Q96NT1 182 aaPredicted RBP18.5■□□□□ 0.55
SNX6-202ENST00000396526 HPSEQ9Y251 543 aa18.5■□□□□ 0.55
SNX6-202ENST00000396526 OLFM4Q6UX06 510 aa18.5■□□□□ 0.55
SNX6-202ENST00000396526 GAKO14976 1311 aa18.5■□□□□ 0.55
SNX6-202ENST00000396526 PFKFB3Q16875 520 aaPredicted RBP18.5■□□□□ 0.55
SNX6-202ENST00000396526 CNTNAP5Q8WYK1 1306 aa18.5■□□□□ 0.55
SNX6-202ENST00000396526 CLIC6Q96NY7 704 aa18.5■□□□□ 0.55
SNX6-202ENST00000396526 SRPRBQ9Y5M8 271 aaKnown RBP18.5■□□□□ 0.55
SNX6-202ENST00000396526 hCG_1642624A0A1W2PR95 340 aa18.49■□□□□ 0.55
SNX6-202ENST00000396526 TRAPPC10P48553 1259 aa18.49■□□□□ 0.55
SNX6-202ENST00000396526 ZNF75DP51815 510 aa18.49■□□□□ 0.55
SNX6-202ENST00000396526 IQCB1Q15051 598 aa18.49■□□□□ 0.55
SNX6-202ENST00000396526 C11orf57Q6ZUT1 292 aaPredicted RBP18.49■□□□□ 0.55
SNX6-202ENST00000396526 CCDC148Q8NFR7 591 aa18.49■□□□□ 0.55
SNX6-202ENST00000396526 CDK8P49336 464 aa18.49■□□□□ 0.55
SNX6-202ENST00000396526 TOB1P50616 345 aaPredicted RBP18.49■□□□□ 0.55
SNX6-202ENST00000396526 RCSD1Q6JBY9 416 aa18.49■□□□□ 0.55
SNX6-202ENST00000396526 OXER1Q8TDS5 423 aa18.49■□□□□ 0.55
SNX6-202ENST00000396526 FERMT2Q96AC1 680 aa18.49■□□□□ 0.55
SNX6-202ENST00000396526 SH3GLB2Q9NR46 395 aa18.49■□□□□ 0.55
SNX6-202ENST00000396526 H0YIN7 160 aa18.48■□□□□ 0.55
SNX6-202ENST00000396526 PLCD1P51178 756 aa18.48■□□□□ 0.55
SNX6-202ENST00000396526 SARM1Q6SZW1 724 aa18.48■□□□□ 0.55
SNX6-202ENST00000396526 C16orf86Q6ZW13 317 aa18.48■□□□□ 0.55
SNX6-202ENST00000396526 PCDHB6Q9Y5E3 794 aa18.48■□□□□ 0.55
SNX6-202ENST00000396526 GRM4Q14833 912 aa18.48■□□□□ 0.55
SNX6-202ENST00000396526 ELOA2Q8IYF1 753 aaPredicted RBP18.48■□□□□ 0.55
SNX6-202ENST00000396526 TTF2Q9UNY4 1162 aaKnown RBP18.48■□□□□ 0.55
SNX6-202ENST00000396526 MORC2Q9Y6X9 1032 aaPredicted RBP18.48■□□□□ 0.55
SNX6-202ENST00000396526 FLT1P17948 1338 aa18.48■□□□□ 0.55
SNX6-202ENST00000396526 KRBA2Q6ZNG9 492 aa18.48■□□□□ 0.55
SNX6-202ENST00000396526 FAM177A1Q8N128 213 aaPredicted RBP18.48■□□□□ 0.55
SNX6-202ENST00000396526 NEDD1Q8NHV4 660 aa18.48■□□□□ 0.55
SNX6-202ENST00000396526 BPIFA3Q9BQP9 254 aa18.48■□□□□ 0.55
SNX6-202ENST00000396526 SLC51AQ86UW1 340 aa18.47■□□□□ 0.55
SNX6-202ENST00000396526 CCDC12Q8WUD4 166 aaPredicted RBP18.47■□□□□ 0.55
SNX6-202ENST00000396526 PIBF1Q8WXW3 757 aa18.47■□□□□ 0.55
SNX6-202ENST00000396526 USP17L3A6NCW0 530 aa18.47■□□□□ 0.55
SNX6-202ENST00000396526 USP17L4A6NCW7 530 aa18.47■□□□□ 0.55
SNX6-202ENST00000396526 RASA1P20936 1047 aa18.47■□□□□ 0.55
SNX6-202ENST00000396526 EVX2Q03828 476 aa18.47■□□□□ 0.55
SNX6-202ENST00000396526 GALNT17Q6IS24 598 aa18.47■□□□□ 0.55
SNX6-202ENST00000396526 USP17L1Q7RTZ2 530 aa18.47■□□□□ 0.55
SNX6-202ENST00000396526 AOPEPQ8N6M6 819 aa18.47■□□□□ 0.55
SNX6-202ENST00000396526 IL17RBQ9NRM6 502 aa18.47■□□□□ 0.55
SNX6-202ENST00000396526 BIN1O00499 593 aa18.47■□□□□ 0.55
SNX6-202ENST00000396526 OFD1O75665 1012 aa18.47■□□□□ 0.55
SNX6-202ENST00000396526 PODNQ7Z5L7 613 aa18.47■□□□□ 0.55
SNX6-202ENST00000396526 ERCC4Q92889 916 aaPredicted RBP18.47■□□□□ 0.55
SNX6-202ENST00000396526 CLIP2Q9UDT6 1046 aa18.47■□□□□ 0.55
SNX6-202ENST00000396526 FBXO2Q9UK22 296 aaPredicted RBP18.47■□□□□ 0.55
SNX6-202ENST00000396526 DAGLAQ9Y4D2 1042 aa18.47■□□□□ 0.55
SNX6-202ENST00000396526 F8W031 263 aaPredicted RBP18.46■□□□□ 0.55
SNX6-202ENST00000396526 DNTTIP2Q5QJE6 756 aaKnown RBP18.46■□□□□ 0.55
SNX6-202ENST00000396526 TTC38Q5R3I4 469 aa18.46■□□□□ 0.55
SNX6-202ENST00000396526 C2CD5Q86YS7 1000 aa18.46■□□□□ 0.55
SNX6-202ENST00000396526 PYM1Q9BRP8 204 aaKnown RBP18.46■□□□□ 0.55
SNX6-202ENST00000396526 TTC12Q9H892 705 aaPredicted RBP18.46■□□□□ 0.55
SNX6-202ENST00000396526 DACH1Q9UI36 760 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 719.5 ms