RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 SAMSN1Q9NSI8 373 aaKnown RBP15.46■□□□□ 0.07
GTF2F1-201ENST00000394456 TRPC5Q9UL62 973 aaPredicted RBP15.46■□□□□ 0.07
GTF2F1-201ENST00000394456 PNPLA7Q6ZV29 1317 aa15.46■□□□□ 0.06
GTF2F1-201ENST00000394456 ADKP55263 362 aaKnown RBP15.45■□□□□ 0.06
GTF2F1-201ENST00000394456 TPM4P67936 248 aa15.45■□□□□ 0.06
GTF2F1-201ENST00000394456 TXNRD3Q86VQ6 643 aa15.45■□□□□ 0.06
GTF2F1-201ENST00000394456 NACAP1Q9BZK3 213 aa15.45■□□□□ 0.06
GTF2F1-201ENST00000394456 KRT23Q9C075 422 aa15.45■□□□□ 0.06
GTF2F1-201ENST00000394456 ST7Q9NRC1 585 aa15.45■□□□□ 0.06
GTF2F1-201ENST00000394456 DNAI1Q9UI46 699 aa15.45■□□□□ 0.06
GTF2F1-201ENST00000394456 MAGEB6P1A0A0J9YX57 407 aa15.45■□□□□ 0.06
GTF2F1-201ENST00000394456 RGL2O15211 777 aa15.45■□□□□ 0.06
GTF2F1-201ENST00000394456 PTPREP23469 700 aa15.45■□□□□ 0.06
GTF2F1-201ENST00000394456 TM4SF1P30408 202 aa15.45■□□□□ 0.06
GTF2F1-201ENST00000394456 POSTNQ15063 836 aa15.45■□□□□ 0.06
GTF2F1-201ENST00000394456 VSTM4Q8IW00 320 aa15.45■□□□□ 0.06
GTF2F1-201ENST00000394456 SMYD4Q8IYR2 804 aaPredicted RBP15.45■□□□□ 0.06
GTF2F1-201ENST00000394456 EPC1Q9H2F5 836 aa15.45■□□□□ 0.06
GTF2F1-201ENST00000394456 STK36Q9NRP7 1315 aa15.45■□□□□ 0.06
GTF2F1-201ENST00000394456 BAZ2BQ9UIF8 2168 aaKnown RBP15.45■□□□□ 0.06
GTF2F1-201ENST00000394456 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.45■□□□□ 0.06
GTF2F1-201ENST00000394456 AFMP43652 599 aa15.45■□□□□ 0.06
GTF2F1-201ENST00000394456 STX17P56962 302 aa15.45■□□□□ 0.06
GTF2F1-201ENST00000394456 HOMER1Q86YM7 354 aa15.45■□□□□ 0.06
GTF2F1-201ENST00000394456 TMEM139Q8IV31 216 aa15.45■□□□□ 0.06
GTF2F1-201ENST00000394456 ENAHQ8N8S7 591 aaPredicted RBP15.45■□□□□ 0.06
GTF2F1-201ENST00000394456 NFE2L3Q9Y4A8 694 aa15.45■□□□□ 0.06
GTF2F1-201ENST00000394456 MYH2Q9UKX2 1941 aa15.44■□□□□ 0.06
GTF2F1-201ENST00000394456 GNAT2P19087 354 aa15.44■□□□□ 0.06
GTF2F1-201ENST00000394456 SEC23AQ15436 765 aa15.44■□□□□ 0.06
GTF2F1-201ENST00000394456 PKN1Q16512 942 aa15.44■□□□□ 0.06
GTF2F1-201ENST00000394456 OLFM4Q6UX06 510 aa15.44■□□□□ 0.06
GTF2F1-201ENST00000394456 TRIM22Q8IYM9 498 aa15.44■□□□□ 0.06
GTF2F1-201ENST00000394456 CNNM2Q9H8M5 875 aa15.44■□□□□ 0.06
GTF2F1-201ENST00000394456 ZNF446Q9NWS9 450 aa15.44■□□□□ 0.06
GTF2F1-201ENST00000394456 A0A0U1RQJ8 604 aa15.44■□□□□ 0.06
GTF2F1-201ENST00000394456 ONECUT3O60422 494 aaPredicted RBP15.44■□□□□ 0.06
GTF2F1-201ENST00000394456 SLU7O95391 586 aaKnown RBP15.44■□□□□ 0.06
GTF2F1-201ENST00000394456 TRIM65Q6PJ69 517 aa15.44■□□□□ 0.06
GTF2F1-201ENST00000394456 FBXO33Q7Z6M2 555 aa15.44■□□□□ 0.06
GTF2F1-201ENST00000394456 REXO1L1PQ8IX06 675 aa15.44■□□□□ 0.06
GTF2F1-201ENST00000394456 ATRIPQ8WXE1 791 aa15.44■□□□□ 0.06
GTF2F1-201ENST00000394456 DHX58Q96C10 678 aa15.44■□□□□ 0.06
GTF2F1-201ENST00000394456 UBAC1Q9BSL1 405 aa15.44■□□□□ 0.06
GTF2F1-201ENST00000394456 QTRT2Q9H974 415 aaKnown RBP15.44■□□□□ 0.06
GTF2F1-201ENST00000394456 ACTN4O43707 911 aaKnown RBP15.43■□□□□ 0.06
GTF2F1-201ENST00000394456 TOP1P11387 765 aaKnown RBP15.43■□□□□ 0.06
GTF2F1-201ENST00000394456 DMTNQ08495 405 aa15.43■□□□□ 0.06
GTF2F1-201ENST00000394456 SAFBQ15424 915 aaKnown RBP eCLIP15.43■□□□□ 0.06
GTF2F1-201ENST00000394456 KLHL10Q6JEL2 608 aa15.43■□□□□ 0.06
GTF2F1-201ENST00000394456 TIAM2Q8IVF5 1701 aa15.43■□□□□ 0.06
GTF2F1-201ENST00000394456 CNBD1Q8NA66 436 aa15.43■□□□□ 0.06
GTF2F1-201ENST00000394456 KCND1Q9NSA2 647 aa15.43■□□□□ 0.06
GTF2F1-201ENST00000394456 V9GY48 417 aaPredicted RBP15.43■□□□□ 0.06
GTF2F1-201ENST00000394456 ERICH2A1L162 156 aa15.43■□□□□ 0.06
GTF2F1-201ENST00000394456 HIBADHP31937 336 aaKnown RBP15.43■□□□□ 0.06
GTF2F1-201ENST00000394456 MTF1Q14872 753 aa15.43■□□□□ 0.06
GTF2F1-201ENST00000394456 SYCP1Q15431 976 aa15.43■□□□□ 0.06
GTF2F1-201ENST00000394456 TOGARAM2Q6ZUX3 1019 aa15.43■□□□□ 0.06
GTF2F1-201ENST00000394456 RIOK1Q9BRS2 568 aaKnown RBP15.43■□□□□ 0.06
GTF2F1-201ENST00000394456 DESI2Q9BSY9 194 aa15.43■□□□□ 0.06
GTF2F1-201ENST00000394456 DDX41Q9UJV9 622 aaKnown RBP15.43■□□□□ 0.06
GTF2F1-201ENST00000394456 DEXIO95424 95 aa15.42■□□□□ 0.06
GTF2F1-201ENST00000394456 CYP2D6P10635 497 aa15.42■□□□□ 0.06
GTF2F1-201ENST00000394456 CD44P16070 742 aaKnown RBP15.42■□□□□ 0.06
GTF2F1-201ENST00000394456 ERO1AQ96HE7 468 aa15.42■□□□□ 0.06
GTF2F1-201ENST00000394456 CGNQ9P2M7 1197 aaKnown RBP15.42■□□□□ 0.06
GTF2F1-201ENST00000394456 UBR3Q6ZT12 1888 aa15.42■□□□□ 0.06
GTF2F1-201ENST00000394456 TEX33O43247 280 aa15.42■□□□□ 0.06
GTF2F1-201ENST00000394456 PRDX5P30044 214 aa15.42■□□□□ 0.06
GTF2F1-201ENST00000394456 SART3Q15020 963 aaKnown RBP15.42■□□□□ 0.06
GTF2F1-201ENST00000394456 ZNF174Q15697 407 aa15.42■□□□□ 0.06
GTF2F1-201ENST00000394456 CCDC93Q567U6 631 aa15.42■□□□□ 0.06
GTF2F1-201ENST00000394456 FAM47AQ5JRC9 791 aa15.42■□□□□ 0.06
GTF2F1-201ENST00000394456 GPR101Q96P66 508 aaPredicted RBP15.42■□□□□ 0.06
GTF2F1-201ENST00000394456 ANKRD2Q9GZV1 360 aa15.42■□□□□ 0.06
GTF2F1-201ENST00000394456 BRWD3Q6RI45 1802 aa15.42■□□□□ 0.06
GTF2F1-201ENST00000394456 PSDA5PKW4 1024 aaPredicted RBP15.41■□□□□ 0.06
GTF2F1-201ENST00000394456 TRIM37O94972 964 aa15.41■□□□□ 0.06
GTF2F1-201ENST00000394456 FUT2Q10981 343 aa15.41■□□□□ 0.06
GTF2F1-201ENST00000394456 FOXP1Q9H334 677 aaPredicted RBP15.41■□□□□ 0.06
GTF2F1-201ENST00000394456 ANKIB1Q9P2G1 1089 aa15.41■□□□□ 0.06
GTF2F1-201ENST00000394456 SARSP49591 514 aaKnown RBP15.41■□□□□ 0.06
GTF2F1-201ENST00000394456 MECOMQ03112 1051 aa15.41■□□□□ 0.06
GTF2F1-201ENST00000394456 MORC3Q14149 939 aa15.41■□□□□ 0.06
GTF2F1-201ENST00000394456 SMARCE1Q969G3 411 aa15.41■□□□□ 0.06
GTF2F1-201ENST00000394456 L2HGDHQ9H9P8 463 aa15.41■□□□□ 0.06
GTF2F1-201ENST00000394456 NSUN4Q96CB9 384 aaKnown RBP15.4■□□□□ 0.06
GTF2F1-201ENST00000394456 WDR24Q96S15 920 aa15.4■□□□□ 0.06
GTF2F1-201ENST00000394456 AATFQ9NY61 560 aaKnown RBP eCLIP15.4■□□□□ 0.06
GTF2F1-201ENST00000394456 OGFRQ9NZT2 677 aa15.4■□□□□ 0.06
GTF2F1-201ENST00000394456 SRPRBQ9Y5M8 271 aaKnown RBP15.4■□□□□ 0.06
GTF2F1-201ENST00000394456 VWA3AA6NCI4 1184 aa15.4■□□□□ 0.06
GTF2F1-201ENST00000394456 ZNF18P17022 549 aa15.4■□□□□ 0.06
GTF2F1-201ENST00000394456 CDK11BP21127 795 aaKnown RBP15.4■□□□□ 0.06
GTF2F1-201ENST00000394456 ETF1P62495 437 aaKnown RBP15.4■□□□□ 0.06
GTF2F1-201ENST00000394456 DPYDQ12882 1025 aa15.4■□□□□ 0.06
GTF2F1-201ENST00000394456 RILPL1Q5EBL4 403 aa15.4■□□□□ 0.06
GTF2F1-201ENST00000394456 PRR5LQ6MZQ0 368 aa15.4■□□□□ 0.06
GTF2F1-201ENST00000394456 TC2NQ8N9U0 490 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms