RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 MRC1P22897 1456 aa11.96□□□□□ -0.49
ACTN1-203ENST00000394419 MARCH6O60337 910 aa11.96□□□□□ -0.5
ACTN1-203ENST00000394419 UBA7P41226 1012 aa11.96□□□□□ -0.5
ACTN1-203ENST00000394419 STAT6P42226 847 aa11.96□□□□□ -0.5
ACTN1-203ENST00000394419 EVX2Q03828 476 aa11.96□□□□□ -0.5
ACTN1-203ENST00000394419 RBL2Q08999 1139 aa11.96□□□□□ -0.5
ACTN1-203ENST00000394419 ALX1Q15699 326 aa11.96□□□□□ -0.5
ACTN1-203ENST00000394419 IQUBQ8NA54 791 aa11.96□□□□□ -0.5
ACTN1-203ENST00000394419 N4BP2Q86UW6 1770 aaPredicted RBP11.96□□□□□ -0.5
ACTN1-203ENST00000394419 SCN11AQ9UI33 1791 aa11.96□□□□□ -0.5
ACTN1-203ENST00000394419 CRYBG1Q9Y4K1 1723 aa11.95□□□□□ -0.5
ACTN1-203ENST00000394419 RHOXF2BP0C7M4 288 aa11.95□□□□□ -0.5
ACTN1-203ENST00000394419 CASP14P31944 242 aa11.95□□□□□ -0.5
ACTN1-203ENST00000394419 PLCD3Q8N3E9 789 aa11.95□□□□□ -0.5
ACTN1-203ENST00000394419 RHOXF2Q9BQY4 288 aa11.95□□□□□ -0.5
ACTN1-203ENST00000394419 SAP30BPQ9UHR5 308 aaKnown RBP11.95□□□□□ -0.5
ACTN1-203ENST00000394419 ABCC12Q96J65 1359 aa11.95□□□□□ -0.5
ACTN1-203ENST00000394419 FGFR2P21802 821 aa11.95□□□□□ -0.5
ACTN1-203ENST00000394419 PLCD1P51178 756 aa11.95□□□□□ -0.5
ACTN1-203ENST00000394419 MAPK8IP2Q13387 824 aaPredicted RBP11.95□□□□□ -0.5
ACTN1-203ENST00000394419 SYCP1Q15431 976 aa11.95□□□□□ -0.5
ACTN1-203ENST00000394419 FAM182BQ5T319 152 aa11.95□□□□□ -0.5
ACTN1-203ENST00000394419 EIF5P55010 431 aaKnown RBP11.95□□□□□ -0.5
ACTN1-203ENST00000394419 ENOX1Q8TC92 643 aaKnown RBP11.95□□□□□ -0.5
ACTN1-203ENST00000394419 CELF1Q92879 486 aaKnown RBP11.95□□□□□ -0.5
ACTN1-203ENST00000394419 NLRP3Q96P20 1036 aa11.95□□□□□ -0.5
ACTN1-203ENST00000394419 MAGEC2Q9UBF1 373 aaPredicted RBP11.95□□□□□ -0.5
ACTN1-203ENST00000394419 PRDX5P30044 214 aa11.94□□□□□ -0.5
ACTN1-203ENST00000394419 TFAP4Q01664 338 aa11.94□□□□□ -0.5
ACTN1-203ENST00000394419 UBXN1Q04323 297 aa11.94□□□□□ -0.5
ACTN1-203ENST00000394419 PAXIP1Q6ZW49 1069 aaPredicted RBP11.94□□□□□ -0.5
ACTN1-203ENST00000394419 ZNF444Q8N0Y2 327 aaPredicted RBP11.94□□□□□ -0.5
ACTN1-203ENST00000394419 PAGE5Q96GU1 130 aa11.94□□□□□ -0.5
ACTN1-203ENST00000394419 ZFP91Q96JP5 570 aaPredicted RBP11.94□□□□□ -0.5
ACTN1-203ENST00000394419 RNF26Q9BY78 433 aaPredicted RBP11.94□□□□□ -0.5
ACTN1-203ENST00000394419 ARFGEF2Q9Y6D5 1785 aa11.94□□□□□ -0.5
ACTN1-203ENST00000394419 ZPR1O75312 459 aa11.94□□□□□ -0.5
ACTN1-203ENST00000394419 IPO7O95373 1038 aaKnown RBP11.94□□□□□ -0.5
ACTN1-203ENST00000394419 GOLGA8HP0CJ92 632 aa11.94□□□□□ -0.5
ACTN1-203ENST00000394419 ATP2B2Q01814 1243 aa11.94□□□□□ -0.5
ACTN1-203ENST00000394419 ZNF512BQ96KM6 892 aaPredicted RBP11.94□□□□□ -0.5
ACTN1-203ENST00000394419 UIMC1Q96RL1 719 aa11.94□□□□□ -0.5
ACTN1-203ENST00000394419 SLF1Q9BQI6 1058 aa11.94□□□□□ -0.5
ACTN1-203ENST00000394419 ARFGAP3Q9NP61 516 aa11.94□□□□□ -0.5
ACTN1-203ENST00000394419 GUCA1BQ9UMX6 200 aa11.94□□□□□ -0.5
ACTN1-203ENST00000394419 GOLGA6L9A6NEM1 432 aa11.94□□□□□ -0.5
ACTN1-203ENST00000394419 STX10O60499 249 aa11.94□□□□□ -0.5
ACTN1-203ENST00000394419 HIBADHP31937 336 aaKnown RBP11.94□□□□□ -0.5
ACTN1-203ENST00000394419 TRIM47Q96LD4 638 aa11.94□□□□□ -0.5
ACTN1-203ENST00000394419 SETDB2Q96T68 719 aa11.94□□□□□ -0.5
ACTN1-203ENST00000394419 HSD3B7Q9H2F3 369 aa11.94□□□□□ -0.5
ACTN1-203ENST00000394419 CPVLQ9H3G5 476 aa11.94□□□□□ -0.5
ACTN1-203ENST00000394419 USP17L8P0C7I0 530 aa11.93□□□□□ -0.5
ACTN1-203ENST00000394419 SLFN14P0C7P3 912 aa11.93□□□□□ -0.5
ACTN1-203ENST00000394419 KLRK1P26718 216 aa11.93□□□□□ -0.5
ACTN1-203ENST00000394419 SPATA1Q5VX52 437 aa11.93□□□□□ -0.5
ACTN1-203ENST00000394419 ACRBPQ8NEB7 543 aa11.93□□□□□ -0.5
ACTN1-203ENST00000394419 ZCCHC17Q9NP64 241 aaKnown RBP11.93□□□□□ -0.5
ACTN1-203ENST00000394419 INTS13Q9NVM9 706 aa11.93□□□□□ -0.5
ACTN1-203ENST00000394419 TSPY3P0CV98 308 aa11.93□□□□□ -0.5
ACTN1-203ENST00000394419 TSPY8P0CW00 308 aa11.93□□□□□ -0.5
ACTN1-203ENST00000394419 KRT9P35527 623 aa11.93□□□□□ -0.5
ACTN1-203ENST00000394419 ITPK1Q13572 414 aa11.93□□□□□ -0.5
ACTN1-203ENST00000394419 TC2NQ8N9U0 490 aa11.93□□□□□ -0.5
ACTN1-203ENST00000394419 DYNLL2Q96FJ2 89 aa11.93□□□□□ -0.5
ACTN1-203ENST00000394419 STK36Q9NRP7 1315 aa11.93□□□□□ -0.5
ACTN1-203ENST00000394419 KIF5BP33176 963 aa11.92□□□□□ -0.5
ACTN1-203ENST00000394419 MORC3Q14149 939 aa11.92□□□□□ -0.5
ACTN1-203ENST00000394419 CCDC178Q5BJE1 867 aa11.92□□□□□ -0.5
ACTN1-203ENST00000394419 C3orf67Q6ZVT6 689 aa11.92□□□□□ -0.5
ACTN1-203ENST00000394419 REXO1L1PQ8IX06 675 aa11.92□□□□□ -0.5
ACTN1-203ENST00000394419 SRRTQ9BXP5 876 aaKnown RBP11.92□□□□□ -0.5
ACTN1-203ENST00000394419 A0A087X0B3 334 aa11.92□□□□□ -0.5
ACTN1-203ENST00000394419 VGLL3A8MV65 326 aa11.92□□□□□ -0.5
ACTN1-203ENST00000394419 WNT7AO00755 349 aa11.92□□□□□ -0.5
ACTN1-203ENST00000394419 PHACTR2O75167 634 aa11.92□□□□□ -0.5
ACTN1-203ENST00000394419 VEGFAP15692 232 aaPredicted RBP11.92□□□□□ -0.5
ACTN1-203ENST00000394419 RPS8P62241 208 aaKnown RBP11.92□□□□□ -0.5
ACTN1-203ENST00000394419 MECOMQ03112 1051 aa11.92□□□□□ -0.5
ACTN1-203ENST00000394419 CUL4BQ13620 913 aa11.92□□□□□ -0.5
ACTN1-203ENST00000394419 JAKMIP3Q5VZ66 844 aa11.92□□□□□ -0.5
ACTN1-203ENST00000394419 CAGE1Q8TC20 777 aa11.92□□□□□ -0.5
ACTN1-203ENST00000394419 NELFBQ8WX92 580 aa11.92□□□□□ -0.5
ACTN1-203ENST00000394419 GOLGA1Q92805 767 aa11.92□□□□□ -0.5
ACTN1-203ENST00000394419 GPR101Q96P66 508 aaPredicted RBP11.92□□□□□ -0.5
ACTN1-203ENST00000394419 CTAGE1Q96RT6 745 aa11.92□□□□□ -0.5
ACTN1-203ENST00000394419 HINFPQ9BQA5 517 aa11.92□□□□□ -0.5
ACTN1-203ENST00000394419 RBM28Q9NW13 759 aaKnown RBP11.92□□□□□ -0.5
ACTN1-203ENST00000394419 SRP68Q9UHB9 627 aaKnown RBP11.92□□□□□ -0.5
ACTN1-203ENST00000394419 GDAQ9Y2T3 454 aa11.92□□□□□ -0.5
ACTN1-203ENST00000394419 ACTN4O43707 911 aaKnown RBP11.92□□□□□ -0.5
ACTN1-203ENST00000394419 CALM1P0DP23 149 aa11.92□□□□□ -0.5
ACTN1-203ENST00000394419 CALM2P0DP24 149 aa11.92□□□□□ -0.5
ACTN1-203ENST00000394419 CALM3P0DP25 149 aa11.92□□□□□ -0.5
ACTN1-203ENST00000394419 SCG2P13521 617 aa11.92□□□□□ -0.5
ACTN1-203ENST00000394419 CD44P16070 742 aaKnown RBP11.92□□□□□ -0.5
ACTN1-203ENST00000394419 STIM1Q13586 685 aa11.92□□□□□ -0.5
ACTN1-203ENST00000394419 FAM98CQ17RN3 349 aaKnown RBP11.92□□□□□ -0.5
ACTN1-203ENST00000394419 INTS5Q6P9B9 1019 aaKnown RBP11.92□□□□□ -0.5
ACTN1-203ENST00000394419 KIAA1328Q86T90 577 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms