RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 PAGR1Q9BTK6 254 aa21.3■■□□□ 1
HOXC6-202ENST00000394331 PUS7LQ9H0K6 701 aaKnown RBP21.3■■□□□ 1
HOXC6-202ENST00000394331 XIRP1Q702N8 1843 aaKnown RBP21.3■■□□□ 1
HOXC6-202ENST00000394331 ANKRD18BA2A2Z9 1011 aa21.3■■□□□ 1
HOXC6-202ENST00000394331 GPAA1O43292 621 aa21.3■■□□□ 1
HOXC6-202ENST00000394331 STIM1Q13586 685 aa21.3■■□□□ 1
HOXC6-202ENST00000394331 ISM2Q6H9L7 571 aa21.3■■□□□ 1
HOXC6-202ENST00000394331 YTHDF3Q7Z739 585 aaKnown RBP21.3■■□□□ 1
HOXC6-202ENST00000394331 NLRP10Q86W26 655 aa21.3■■□□□ 1
HOXC6-202ENST00000394331 TTLL11Q8NHH1 800 aa21.3■■□□□ 1
HOXC6-202ENST00000394331 AKR1B15C9JRZ8 316 aaPredicted RBP21.29■■□□□ 1
HOXC6-202ENST00000394331 ITGA6P23229 1130 aa21.29■■□□□ 1
HOXC6-202ENST00000394331 TTF1Q15361 905 aaPredicted RBP21.29■■□□□ 1
HOXC6-202ENST00000394331 ZNF569Q5MCW4 686 aa21.29■■□□□ 1
HOXC6-202ENST00000394331 WLSQ5T9L3 541 aa21.29■■□□□ 1
HOXC6-202ENST00000394331 GRIN2DO15399 1336 aa21.29■■□□□ 1
HOXC6-202ENST00000394331 KLF18A0A0U1RQI7 1052 aa21.29■■□□□ 1
HOXC6-202ENST00000394331 FECHP22830 423 aa21.29■■□□□ 1
HOXC6-202ENST00000394331 MRPL12P52815 198 aaKnown RBP21.29■■□□□ 1
HOXC6-202ENST00000394331 USP14P54578 494 aa21.29■■□□□ 1
HOXC6-202ENST00000394331 JMYQ8N9B5 988 aa21.29■■□□□ 1
HOXC6-202ENST00000394331 C8orf76Q96K31 380 aa21.29■■□□□ 1
HOXC6-202ENST00000394331 LZTFL1Q9NQ48 299 aa21.29■■□□□ 1
HOXC6-202ENST00000394331 GCFC2P16383 781 aaKnown RBP21.28■■□□□ 1
HOXC6-202ENST00000394331 AMPD2Q01433 879 aa21.28■■□□□ 1
HOXC6-202ENST00000394331 CPLX2Q6PUV4 134 aaKnown RBP21.28■■□□□ 1
HOXC6-202ENST00000394331 VEZTQ9HBM0 779 aa21.28■■□□□ 1
HOXC6-202ENST00000394331 RIC1Q4ADV7 1423 aa21.28■■□□□ 1
HOXC6-202ENST00000394331 GOLGA8BA8MQT2 603 aa21.28■■□□□ 1
HOXC6-202ENST00000394331 RDXP35241 583 aaKnown RBP21.28■■□□□ 1
HOXC6-202ENST00000394331 CTSWP56202 376 aa21.28■■□□□ 1
HOXC6-202ENST00000394331 PLCB4Q15147 1175 aa21.28■■□□□ 1
HOXC6-202ENST00000394331 MYSM1Q5VVJ2 828 aa21.28■■□□□ 1
HOXC6-202ENST00000394331 ZKSCAN4Q969J2 545 aaPredicted RBP21.28■■□□□ 1
HOXC6-202ENST00000394331 GPHNQ9NQX3 736 aaPredicted RBP21.28■■□□□ 1
HOXC6-202ENST00000394331 CNNM1Q9NRU3 951 aa21.28■■□□□ 1
HOXC6-202ENST00000394331 SYKP43405 635 aa21.28■■□□□ 1
HOXC6-202ENST00000394331 BCAS4Q8TDM0 211 aa21.28■■□□□ 1
HOXC6-202ENST00000394331 FAXDC2Q96IV6 333 aa21.28■■□□□ 1
HOXC6-202ENST00000394331 CAPS2Q9BXY5 557 aa21.28■■□□□ 1
HOXC6-202ENST00000394331 CPLX1O14810 134 aa21.27■■□□□ 1
HOXC6-202ENST00000394331 ARHGAP25P42331 645 aa21.27■■□□□ 1
HOXC6-202ENST00000394331 NOA1Q8NC60 698 aaKnown RBP21.27■■□□□ 1
HOXC6-202ENST00000394331 GREM2Q9H772 168 aa21.27■■□□□ 1
HOXC6-202ENST00000394331 MROH7-TTC4A0A0A0MT08 1334 aa21.27■■□□□ 1
HOXC6-202ENST00000394331 GOLGA6CA6NDK9 693 aa21.27■■□□□ 1
HOXC6-202ENST00000394331 GOLGA6DP0CG33 693 aa21.27■■□□□ 1
HOXC6-202ENST00000394331 ADD2P35612 726 aa21.27■■□□□ 1
HOXC6-202ENST00000394331 MCAMP43121 646 aa21.27■■□□□ 1
HOXC6-202ENST00000394331 CRYMQ14894 314 aa21.27■■□□□ 1
HOXC6-202ENST00000394331 GRIPAP1Q4V328 841 aa21.27■■□□□ 1
HOXC6-202ENST00000394331 RAD9BQ6WBX8 426 aa21.27■■□□□ 1
HOXC6-202ENST00000394331 GOLGA6AQ9NYA3 693 aa21.27■■□□□ 1
HOXC6-202ENST00000394331 CAPN7Q9Y6W3 813 aa21.27■■□□□ 1
HOXC6-202ENST00000394331 TOGARAM1Q9Y4F4 1720 aa21.26■□□□□ 0.99
HOXC6-202ENST00000394331 SOWAHDA6NJG2 315 aa21.26■□□□□ 0.99
HOXC6-202ENST00000394331 PPFIA3O75145 1194 aa21.26■□□□□ 0.99
HOXC6-202ENST00000394331 MTF1Q14872 753 aa21.26■□□□□ 0.99
HOXC6-202ENST00000394331 HLFQ16534 295 aa21.26■□□□□ 0.99
HOXC6-202ENST00000394331 PI16Q6UXB8 463 aa21.26■□□□□ 0.99
HOXC6-202ENST00000394331 FAM212AQ96EL1 285 aa21.26■□□□□ 0.99
HOXC6-202ENST00000394331 RPGRIP1Q96KN7 1286 aa21.26■□□□□ 0.99
HOXC6-202ENST00000394331 SH3GL2Q99962 352 aa21.26■□□□□ 0.99
HOXC6-202ENST00000394331 SCP2P22307 547 aa21.26■□□□□ 0.99
HOXC6-202ENST00000394331 NR1I3Q14994 352 aa21.26■□□□□ 0.99
HOXC6-202ENST00000394331 ANO1Q5XXA6 986 aa21.26■□□□□ 0.99
HOXC6-202ENST00000394331 FMNL3Q8IVF7 1028 aa21.26■□□□□ 0.99
HOXC6-202ENST00000394331 TEX11Q8IYF3 940 aa21.26■□□□□ 0.99
HOXC6-202ENST00000394331 SLC35F6Q8N357 371 aa21.26■□□□□ 0.99
HOXC6-202ENST00000394331 ENOX1Q8TC92 643 aaKnown RBP21.26■□□□□ 0.99
HOXC6-202ENST00000394331 HPS5Q9UPZ3 1129 aa21.26■□□□□ 0.99
HOXC6-202ENST00000394331 ZEB2O60315 1214 aa21.25■□□□□ 0.99
HOXC6-202ENST00000394331 NF2P35240 595 aa21.25■□□□□ 0.99
HOXC6-202ENST00000394331 ANTXR2P58335 489 aa21.25■□□□□ 0.99
HOXC6-202ENST00000394331 CCDC51Q96ER9 411 aa21.25■□□□□ 0.99
HOXC6-202ENST00000394331 CRACR2AQ9BSW2 395 aa21.25■□□□□ 0.99
HOXC6-202ENST00000394331 IRS4O14654 1257 aaPredicted RBP21.25■□□□□ 0.99
HOXC6-202ENST00000394331 GGCXP38435 758 aa21.25■□□□□ 0.99
HOXC6-202ENST00000394331 IRX1P78414 480 aaPredicted RBP21.25■□□□□ 0.99
HOXC6-202ENST00000394331 UBE3CQ15386 1083 aa21.25■□□□□ 0.99
HOXC6-202ENST00000394331 SLC9C2Q5TAH2 1124 aa21.25■□□□□ 0.99
HOXC6-202ENST00000394331 SYNE4Q8N205 404 aa21.25■□□□□ 0.99
HOXC6-202ENST00000394331 MYO6Q9UM54 1294 aa21.25■□□□□ 0.99
HOXC6-202ENST00000394331 AGPSO00116 658 aa21.25■□□□□ 0.99
HOXC6-202ENST00000394331 SLC39A14Q15043 492 aa21.25■□□□□ 0.99
HOXC6-202ENST00000394331 DACH1Q9UI36 760 aa21.25■□□□□ 0.99
HOXC6-202ENST00000394331 ABCA3Q99758 1704 aa21.24■□□□□ 0.99
HOXC6-202ENST00000394331 A0A1B0GTH6 734 aa21.24■□□□□ 0.99
HOXC6-202ENST00000394331 PPP6R2O75170 966 aa21.24■□□□□ 0.99
HOXC6-202ENST00000394331 SKOR1P84550 965 aa21.24■□□□□ 0.99
HOXC6-202ENST00000394331 PPP2R5AQ15172 486 aa21.24■□□□□ 0.99
HOXC6-202ENST00000394331 TRMT112Q9UI30 125 aaKnown RBP21.24■□□□□ 0.99
HOXC6-202ENST00000394331 GOLGA8KD6RF30 607 aa21.24■□□□□ 0.99
HOXC6-202ENST00000394331 MEFVO15553 781 aaPredicted RBP21.24■□□□□ 0.99
HOXC6-202ENST00000394331 KIAA0754O94854 1291 aa21.24■□□□□ 0.99
HOXC6-202ENST00000394331 PDE8BO95263 885 aa21.24■□□□□ 0.99
HOXC6-202ENST00000394331 CYP19A1P11511 503 aaPredicted RBP21.24■□□□□ 0.99
HOXC6-202ENST00000394331 NUTM2AQ8IVF1 878 aaPredicted RBP21.24■□□□□ 0.99
HOXC6-202ENST00000394331 VGLL2Q8N8G2 317 aa21.24■□□□□ 0.99
HOXC6-202ENST00000394331 PDE8AO60658 829 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms