RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 ANKS1AQ92625 1134 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 RGMAQ96B86 450 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 CLIP3Q96DZ5 547 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 SUSD3Q96L08 255 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 ZNF778Q96MU6 729 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 WWC2-AS2Q96NR7 200 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 FCRL4Q96PJ5 515 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 DUSP23Q9BVJ7 150 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 FOXQ1Q9C009 403 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 PRDM14Q9GZV8 571 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 ZMYND15Q9H091 742 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 C19orf44Q9H6X5 657 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 SP110Q9HB58 689 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 PIDD1Q9HB75 910 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 GPCPD1Q9NPB8 672 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 C11orf16Q9NQ32 467 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 FAM217BQ9NTX9 383 aaPredicted RBP0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 NTMQ9P121 344 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 PPP4R1LQ9P1A2 415 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 ZFATQ9P243 1243 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 ZNF70Q9UC06 446 aaPredicted RBP0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 LIMD1Q9UGP4 676 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 GPR160Q9UJ42 338 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 ERRFI1Q9UJM3 462 aaPredicted RBP0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 ZNF232Q9UNY5 417 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 IQSEC3Q9UPP2 1182 aaPredicted RBP0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 INVSQ9Y283 1065 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 USP20Q9Y2K6 914 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 FRMD4BQ9Y2L6 1034 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 PMF1-BGLAPU3KQ54 211 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 SPATA31A6Q5VVP1 1343 aa0.04□□□□□ -2.4
TRAJ28-201ENST00000390509 IGKV2D-30A0A075B6S6 120 aa0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 SERTM1A2A2V5 107 aa0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 EME2A4GXA9 379 aaPredicted RBP0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 A6NJY4 79 aa0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 NUTM2BA6NNL0 878 aaPredicted RBP0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 NUTM2EB1AL46 878 aaPredicted RBP0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 PRSS44E7EML9 344 aa0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 H3BS24 57 aa0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 INSIG1O15503 277 aa0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 SMAD6O43541 496 aaKnown RBP0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 SPRY2O43597 315 aa0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 KIF4AO95239 1232 aa0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 DLGAP3O95886 979 aa0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 IGKV2-30P06310 120 aa0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 KRT4P19013 534 aa0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 RFX1P22670 979 aa0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 CYP7A1P22680 504 aa0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 NR4A1P22736 598 aa0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 PROZP22891 400 aa0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 CCKARP32238 428 aa0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 PTGER1P34995 402 aa0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 NOS2P35228 1153 aa0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 SCNN1DP51172 638 aa0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 HNRNPA3P51991 378 aaKnown RBP0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 POLGP54098 1239 aaPredicted RBP0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 EPHB4P54760 987 aa0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 MCCD1P59942 119 aaPredicted RBP0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 HTRA3P83110 453 aa0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 ATP11AP98196 1134 aa0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 DLX2Q07687 328 aaPredicted RBP0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 DDR1Q08345 913 aa0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 HYAL2Q12891 473 aa0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 DUSP4Q13115 394 aa0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 RGL3Q3MIN7 710 aa0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 AKAP4Q5JQC9 854 aa0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 LCE3CQ5T5A8 94 aa0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 LCE3EQ5T5B0 92 aa0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 NUTM2DQ5VT03 806 aaPredicted RBP0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 FNDC7Q5VTL7 733 aa0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 CEP135Q66GS9 1140 aa0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 SP5Q6BEB4 398 aaPredicted RBP0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 ZNF425Q6IV72 752 aa0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 RNF111Q6ZNA4 994 aa0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 Q7L0L9 218 aa0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 ERICH6Q7L0X2 663 aa0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 TMPRSS12Q86WS5 348 aa0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 NUTM2AQ8IVF1 878 aaPredicted RBP0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 C1orf210Q8IVY1 113 aa0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 RPUSD2Q8IZ73 545 aaKnown RBP0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 MFSD4AQ8N468 514 aa0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 ZNF276Q8N554 614 aa0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 RBMXL3Q8N7X1 1067 aaKnown RBP0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 ZNF280CQ8ND82 737 aa0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 GPR150Q8NGU9 434 aa0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 Q8TCH9 128 aa0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 ADAMTS17Q8TE56 1095 aa0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 ZNF526Q8TF50 670 aaPredicted RBP0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 C7orf43Q8WVR3 580 aa0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 CSRNP3Q8WYN3 585 aa0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 DHX38Q92620 1227 aaKnown RBP0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 EXTL1Q92935 676 aa0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 L3MBTL2Q969R5 705 aa0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 SYTL4Q96C24 671 aaPredicted RBP0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 SIRT1Q96EB6 747 aa0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 IFT43Q96FT9 208 aa0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 SPACA7Q96KW9 195 aa0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 HEXIM2Q96MH2 286 aaKnown RBP0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 HSPA12BQ96MM6 686 aa0.03□□□□□ -2.4
TRAJ28-201ENST00000390509 PLEKHG4BQ96PX9 1271 aa0.03□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms