RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 TSPY8P0CW00 308 aa20.98■□□□□ 0.95
ACTN4-202ENST00000390009 TOB1P50616 345 aaPredicted RBP20.98■□□□□ 0.95
ACTN4-202ENST00000390009 LUZP1Q86V48 1076 aa20.98■□□□□ 0.95
ACTN4-202ENST00000390009 ZNF444Q8N0Y2 327 aaPredicted RBP20.98■□□□□ 0.95
ACTN4-202ENST00000390009 SRBD1Q8N5C6 995 aaKnown RBP20.98■□□□□ 0.95
ACTN4-202ENST00000390009 OXER1Q8TDS5 423 aa20.98■□□□□ 0.95
ACTN4-202ENST00000390009 ZNF622Q969S3 477 aaKnown RBP eCLIP20.98■□□□□ 0.959e-9■□□□□ 11
ACTN4-202ENST00000390009 DNAJC25Q9H1X3 360 aa20.98■□□□□ 0.95
ACTN4-202ENST00000390009 DAGLAQ9Y4D2 1042 aa20.98■□□□□ 0.95
ACTN4-202ENST00000390009 RILPL1Q5EBL4 403 aa20.97■□□□□ 0.95
ACTN4-202ENST00000390009 ANKS1AQ92625 1134 aa20.97■□□□□ 0.95
ACTN4-202ENST00000390009 PHF20Q9BVI0 1012 aa20.97■□□□□ 0.95
ACTN4-202ENST00000390009 CCDC39Q9UFE4 941 aa20.97■□□□□ 0.95
ACTN4-202ENST00000390009 SUGT1Q9Y2Z0 365 aa20.97■□□□□ 0.95
ACTN4-202ENST00000390009 PFKFB1P16118 471 aa20.96■□□□□ 0.95
ACTN4-202ENST00000390009 RASA1P20936 1047 aa20.96■□□□□ 0.95
ACTN4-202ENST00000390009 CCDC178Q5BJE1 867 aa20.96■□□□□ 0.95
ACTN4-202ENST00000390009 SDF4Q9BRK5 362 aa20.96■□□□□ 0.95
ACTN4-202ENST00000390009 ZNF287Q9HBT7 754 aa20.96■□□□□ 0.95
ACTN4-202ENST00000390009 TCP11L1Q9NUJ3 509 aa20.96■□□□□ 0.95
ACTN4-202ENST00000390009 USP17L3A6NCW0 530 aa20.96■□□□□ 0.95
ACTN4-202ENST00000390009 USP17L4A6NCW7 530 aa20.96■□□□□ 0.95
ACTN4-202ENST00000390009 CAVIN2O95810 425 aa20.96■□□□□ 0.95
ACTN4-202ENST00000390009 CLCN1P35523 988 aa20.96■□□□□ 0.95
ACTN4-202ENST00000390009 ZNF165P49910 485 aa20.96■□□□□ 0.95
ACTN4-202ENST00000390009 PLCB2Q00722 1185 aa20.96■□□□□ 0.95
ACTN4-202ENST00000390009 DOK7Q18PE1 504 aa20.96■□□□□ 0.95
ACTN4-202ENST00000390009 USP17L1Q7RTZ2 530 aa20.96■□□□□ 0.95
ACTN4-202ENST00000390009 CERS5Q8N5B7 392 aa20.96■□□□□ 0.95
ACTN4-202ENST00000390009 PNMA1Q8ND90 353 aa20.96■□□□□ 0.95
ACTN4-202ENST00000390009 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.95■□□□□ 0.94
ACTN4-202ENST00000390009 AP5Z1O43299 807 aa20.95■□□□□ 0.94
ACTN4-202ENST00000390009 ZNF202O95125 648 aa20.95■□□□□ 0.94
ACTN4-202ENST00000390009 KIF5BP33176 963 aa20.95■□□□□ 0.94
ACTN4-202ENST00000390009 STX1AQ16623 288 aa20.95■□□□□ 0.94
ACTN4-202ENST00000390009 C16orf86Q6ZW13 317 aa20.95■□□□□ 0.94
ACTN4-202ENST00000390009 C2CD5Q86YS7 1000 aa20.95■□□□□ 0.94
ACTN4-202ENST00000390009 F8W031 263 aaPredicted RBP20.95■□□□□ 0.94
ACTN4-202ENST00000390009 CDK8P49336 464 aa20.95■□□□□ 0.94
ACTN4-202ENST00000390009 SHC4Q6S5L8 630 aa20.95■□□□□ 0.94
ACTN4-202ENST00000390009 NOL7Q9UMY1 257 aaKnown RBP20.95■□□□□ 0.94
ACTN4-202ENST00000390009 SNED1Q8TER0 1413 aa20.94■□□□□ 0.94
ACTN4-202ENST00000390009 SLX4Q8IY92 1834 aa20.94■□□□□ 0.94
ACTN4-202ENST00000390009 KRT2P35908 639 aa20.94■□□□□ 0.94
ACTN4-202ENST00000390009 CUTAO60888 179 aa20.93■□□□□ 0.94
ACTN4-202ENST00000390009 PTMAP06454 111 aaKnown RBP20.93■□□□□ 0.94
ACTN4-202ENST00000390009 ERCC4Q92889 916 aaPredicted RBP20.93■□□□□ 0.94
ACTN4-202ENST00000390009 CLIC6Q96NY7 704 aa20.93■□□□□ 0.94
ACTN4-202ENST00000390009 EYA3Q99504 573 aa20.93■□□□□ 0.94
ACTN4-202ENST00000390009 CABP5Q9NP86 173 aa20.93■□□□□ 0.94
ACTN4-202ENST00000390009 RGS17Q9UGC6 210 aaPredicted RBP20.93■□□□□ 0.94
ACTN4-202ENST00000390009 TTF2Q9UNY4 1162 aaKnown RBP20.93■□□□□ 0.94
ACTN4-202ENST00000390009 HPSEQ9Y251 543 aa20.93■□□□□ 0.94
ACTN4-202ENST00000390009 ADAMTSL1Q8N6G6 1762 aa20.93■□□□□ 0.94
ACTN4-202ENST00000390009 G3V3G9 751 aa20.93■□□□□ 0.94
ACTN4-202ENST00000390009 H0YIN7 160 aa20.93■□□□□ 0.94
ACTN4-202ENST00000390009 SLC15A2Q16348 729 aa20.93■□□□□ 0.94
ACTN4-202ENST00000390009 DCAF8Q5TAQ9 597 aa20.93■□□□□ 0.94
ACTN4-202ENST00000390009 RESP18Q5W5W9 173 aa20.93■□□□□ 0.94
ACTN4-202ENST00000390009 MXD3Q9BW11 206 aa20.93■□□□□ 0.94
ACTN4-202ENST00000390009 PCDHB6Q9Y5E3 794 aa20.93■□□□□ 0.94
ACTN4-202ENST00000390009 MYH8P13535 1937 aa20.92■□□□□ 0.94
ACTN4-202ENST00000390009 FAM237AA0A1B0GTK4 181 aa20.92■□□□□ 0.94
ACTN4-202ENST00000390009 MSNP26038 577 aaKnown RBP20.92■□□□□ 0.94
ACTN4-202ENST00000390009 SYKP43405 635 aa20.92■□□□□ 0.94
ACTN4-202ENST00000390009 EZH2Q15910 746 aaKnown RBP20.92■□□□□ 0.94
ACTN4-202ENST00000390009 STYK1Q6J9G0 422 aa20.92■□□□□ 0.94
ACTN4-202ENST00000390009 C11orf57Q6ZUT1 292 aaPredicted RBP20.92■□□□□ 0.94
ACTN4-202ENST00000390009 KRI1Q8N9T8 703 aaKnown RBP20.92■□□□□ 0.94
ACTN4-202ENST00000390009 SCG2P13521 617 aa20.92■□□□□ 0.94
ACTN4-202ENST00000390009 UBE2Q2Q8WVN8 375 aa20.92■□□□□ 0.94
ACTN4-202ENST00000390009 BRMS1Q9HCU9 246 aa20.92■□□□□ 0.94
ACTN4-202ENST00000390009 ANO10Q9NW15 660 aa20.92■□□□□ 0.94
ACTN4-202ENST00000390009 STX8Q9UNK0 236 aa20.92■□□□□ 0.94
ACTN4-202ENST00000390009 EN1Q05925 392 aaPredicted RBP20.91■□□□□ 0.94
ACTN4-202ENST00000390009 GRM4Q14833 912 aa20.91■□□□□ 0.94
ACTN4-202ENST00000390009 PFKFB3Q16875 520 aaPredicted RBP20.91■□□□□ 0.94
ACTN4-202ENST00000390009 POTEAQ6S8J7 498 aa20.91■□□□□ 0.94
ACTN4-202ENST00000390009 TIGD1Q96MW7 591 aa20.91■□□□□ 0.94
ACTN4-202ENST00000390009 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.91■□□□□ 0.94
ACTN4-202ENST00000390009 KIAA1468Q9P260 1216 aa20.91■□□□□ 0.94
ACTN4-202ENST00000390009 NPY5RQ15761 445 aa20.9■□□□□ 0.94
ACTN4-202ENST00000390009 STAG2Q8N3U4 1231 aa20.9■□□□□ 0.94
ACTN4-202ENST00000390009 CAMKK2Q96RR4 588 aa20.9■□□□□ 0.94
ACTN4-202ENST00000390009 TMEM47Q9BQJ4 181 aa20.9■□□□□ 0.94
ACTN4-202ENST00000390009 CEP131Q9UPN4 1083 aa20.9■□□□□ 0.94
ACTN4-202ENST00000390009 A0A087WWV3 80 aa20.9■□□□□ 0.94
ACTN4-202ENST00000390009 FAM205CA6NFA0 338 aa20.9■□□□□ 0.94
ACTN4-202ENST00000390009 ATP2B1P20020 1258 aa20.9■□□□□ 0.94
ACTN4-202ENST00000390009 PICALMQ13492 652 aa20.9■□□□□ 0.94
ACTN4-202ENST00000390009 EARS2Q5JPH6 523 aaKnown RBP20.9■□□□□ 0.94
ACTN4-202ENST00000390009 NEDD1Q8NHV4 660 aa20.9■□□□□ 0.94
ACTN4-202ENST00000390009 PIBF1Q8WXW3 757 aa20.9■□□□□ 0.94
ACTN4-202ENST00000390009 DBNDD1Q9H9R9 158 aa20.9■□□□□ 0.94
ACTN4-202ENST00000390009 MAD2L2Q9UI95 211 aa20.9■□□□□ 0.94
ACTN4-202ENST00000390009 ZKSCAN5Q9Y2L8 839 aa20.9■□□□□ 0.94
ACTN4-202ENST00000390009 PTPREP23469 700 aa20.89■□□□□ 0.94
ACTN4-202ENST00000390009 SCNN1DP51172 638 aa20.89■□□□□ 0.94
ACTN4-202ENST00000390009 IQCB1Q15051 598 aa20.89■□□□□ 0.94
ACTN4-202ENST00000390009 PODNQ7Z5L7 613 aa20.89■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms