RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 ARHGAP27Q6ZUM4 889 aa21.29■■□□□ 1
CSPG5-202ENST00000383738 TRMT44Q8IYL2 757 aaKnown RBP21.29■■□□□ 1
CSPG5-202ENST00000383738 ZNHIT6Q9NWK9 470 aaKnown RBP21.29■■□□□ 1
CSPG5-202ENST00000383738 ATP2B4P23634 1241 aa21.29■■□□□ 1
CSPG5-202ENST00000383738 CHRNA5P30532 468 aa21.29■■□□□ 1
CSPG5-202ENST00000383738 VPS72Q15906 364 aa21.29■■□□□ 1
CSPG5-202ENST00000383738 SMARCC2Q8TAQ2 1214 aa21.29■■□□□ 1
CSPG5-202ENST00000383738 GPKOWQ92917 476 aaPredicted RBP eCLIP21.29■■□□□ 1
CSPG5-202ENST00000383738 CYP2D6P10635 497 aa21.29■■□□□ 1
CSPG5-202ENST00000383738 SLC1A4P43007 532 aa21.29■■□□□ 1
CSPG5-202ENST00000383738 CLCN6P51797 869 aa21.29■■□□□ 1
CSPG5-202ENST00000383738 DEFB132Q7Z7B7 95 aa21.29■■□□□ 1
CSPG5-202ENST00000383738 NIM1KQ8IY84 436 aa21.29■■□□□ 1
CSPG5-202ENST00000383738 JADE2Q9NQC1 790 aa21.29■■□□□ 1
CSPG5-202ENST00000383738 RBM6P78332 1123 aaKnown RBP21.29■■□□□ 1
CSPG5-202ENST00000383738 CLEC4GQ6UXB4 293 aa21.29■■□□□ 1
CSPG5-202ENST00000383738 ARHGEF28Q8N1W1 1705 aaKnown RBP21.29■■□□□ 1
CSPG5-202ENST00000383738 TM6SF1Q9BZW5 370 aa21.29■■□□□ 1
CSPG5-202ENST00000383738 DACH1Q9UI36 760 aa21.29■■□□□ 1
CSPG5-202ENST00000383738 SCAF8Q9UPN6 1271 aaKnown RBP21.29■■□□□ 1
CSPG5-202ENST00000383738 SIGLEC1Q9BZZ2 1709 aa21.28■■□□□ 1
CSPG5-202ENST00000383738 BTBD18B2RXH4 712 aa21.28■■□□□ 1
CSPG5-202ENST00000383738 PDIA3P30101 505 aaKnown RBP21.28■■□□□ 1
CSPG5-202ENST00000383738 MECOMQ03112 1051 aa21.28■■□□□ 1
CSPG5-202ENST00000383738 SF3A3Q12874 501 aaKnown RBP eCLIP21.28■■□□□ 1
CSPG5-202ENST00000383738 UBE3CQ15386 1083 aa21.28■■□□□ 1
CSPG5-202ENST00000383738 BAG1Q99933 345 aaPredicted RBP21.28■■□□□ 1
CSPG5-202ENST00000383738 SEPT11Q9NVA2 429 aaKnown RBP21.28■■□□□ 1
CSPG5-202ENST00000383738 SHTN1A0MZ66 631 aa21.28■■□□□ 1
CSPG5-202ENST00000383738 KRT2P35908 639 aa21.28■■□□□ 1
CSPG5-202ENST00000383738 IRX5P78411 483 aaPredicted RBP21.28■■□□□ 1
CSPG5-202ENST00000383738 ZSWIM5Q9P217 1185 aa21.28■■□□□ 1
CSPG5-202ENST00000383738 GUCA1BQ9UMX6 200 aa21.28■■□□□ 1
CSPG5-202ENST00000383738 SPATA31A5Q5VU36 1347 aa21.28■■□□□ 1
CSPG5-202ENST00000383738 SPATA31A7Q8IWB4 1347 aa21.28■■□□□ 1
CSPG5-202ENST00000383738 GIMAP7Q8NHV1 300 aa21.27■■□□□ 1
CSPG5-202ENST00000383738 CPVLQ9H3G5 476 aa21.27■■□□□ 1
CSPG5-202ENST00000383738 BCCIPQ9P287 314 aaKnown RBP eCLIP21.27■■□□□ 1
CSPG5-202ENST00000383738 N4BP3O15049 544 aa21.27■■□□□ 1
CSPG5-202ENST00000383738 ZEB2O60315 1214 aa21.27■■□□□ 1
CSPG5-202ENST00000383738 CT47A1Q5JQC4 288 aaPredicted RBP21.27■■□□□ 1
CSPG5-202ENST00000383738 CCDC148Q8NFR7 591 aa21.27■■□□□ 1
CSPG5-202ENST00000383738 MMRN2Q9H8L6 949 aa21.27■■□□□ 1
CSPG5-202ENST00000383738 TAF6LQ9Y6J9 622 aa21.27■■□□□ 1
CSPG5-202ENST00000383738 KIAA1210Q9ULL0 1709 aa21.27■■□□□ 1
CSPG5-202ENST00000383738 RGS12O14924 1447 aa21.27■■□□□ 1
CSPG5-202ENST00000383738 CTAGE15A4D2H0 777 aa21.27■■□□□ 1
CSPG5-202ENST00000383738 CTAGE8P0CG41 777 aa21.27■■□□□ 1
CSPG5-202ENST00000383738 TCERG1LQ5VWI1 586 aa21.27■■□□□ 1
CSPG5-202ENST00000383738 CTAGE6Q86UF2 777 aa21.27■■□□□ 1
CSPG5-202ENST00000383738 CTAGE4Q8IX94 777 aa21.27■■□□□ 1
CSPG5-202ENST00000383738 SLC44A5Q8NCS7 719 aa21.27■■□□□ 1
CSPG5-202ENST00000383738 RAB34Q9BZG1 259 aa21.27■■□□□ 1
CSPG5-202ENST00000383738 GBP3Q9H0R5 595 aa21.27■■□□□ 1
CSPG5-202ENST00000383738 GPR108Q9NPR9 543 aa21.27■■□□□ 1
CSPG5-202ENST00000383738 STAT6P42226 847 aa21.26■□□□□ 0.99
CSPG5-202ENST00000383738 NECTIN1Q15223 517 aa21.26■□□□□ 0.99
CSPG5-202ENST00000383738 RTL9Q8NET4 1388 aa21.26■□□□□ 0.99
CSPG5-202ENST00000383738 E2F4Q16254 413 aa21.26■□□□□ 0.99
CSPG5-202ENST00000383738 CALML4Q96GE6 196 aa21.26■□□□□ 0.99
CSPG5-202ENST00000383738 BSDC1Q9NW68 430 aaPredicted RBP21.26■□□□□ 0.99
CSPG5-202ENST00000383738 FBXO3Q9UK99 471 aa21.26■□□□□ 0.99
CSPG5-202ENST00000383738 RAD51AP2Q09MP3 1159 aa21.26■□□□□ 0.99
CSPG5-202ENST00000383738 PNMA1Q8ND90 353 aa21.26■□□□□ 0.99
CSPG5-202ENST00000383738 C6orf50Q9HD87 102 aa21.26■□□□□ 0.99
CSPG5-202ENST00000383738 A0A0G2JLW4 131 aa21.25■□□□□ 0.99
CSPG5-202ENST00000383738 CAMTA2O94983 1202 aa21.25■□□□□ 0.99
CSPG5-202ENST00000383738 ETF1P62495 437 aaKnown RBP21.25■□□□□ 0.99
CSPG5-202ENST00000383738 GRAPQ13588 217 aa21.25■□□□□ 0.99
CSPG5-202ENST00000383738 FANCBQ8NB91 859 aa21.25■□□□□ 0.99
CSPG5-202ENST00000383738 GRAPLQ8TC17 118 aaPredicted RBP21.25■□□□□ 0.99
CSPG5-202ENST00000383738 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.25■□□□□ 0.99
CSPG5-202ENST00000383738 DPCR1Q3MIW9 517 aa21.25■□□□□ 0.99
CSPG5-202ENST00000383738 RRAGBQ5VZM2 374 aa21.25■□□□□ 0.99
CSPG5-202ENST00000383738 TICAM2Q86XR7 235 aa21.25■□□□□ 0.99
CSPG5-202ENST00000383738 TBC1D22AQ8WUA7 517 aa21.25■□□□□ 0.99
CSPG5-202ENST00000383738 ZNF827Q17R98 1081 aa21.24■□□□□ 0.99
CSPG5-202ENST00000383738 SPTLC3Q9NUV7 552 aa21.24■□□□□ 0.99
CSPG5-202ENST00000383738 IQSEC2Q5JU85 1478 aa21.24■□□□□ 0.99
CSPG5-202ENST00000383738 DEXIO95424 95 aa21.24■□□□□ 0.99
CSPG5-202ENST00000383738 TXKP42681 527 aa21.24■□□□□ 0.99
CSPG5-202ENST00000383738 ANO1Q5XXA6 986 aa21.24■□□□□ 0.99
CSPG5-202ENST00000383738 RIPOR2Q9Y4F9 1068 aa21.24■□□□□ 0.99
CSPG5-202ENST00000383738 SPDYE3A6NKU9 549 aa21.24■□□□□ 0.99
CSPG5-202ENST00000383738 AP5Z1O43299 807 aa21.24■□□□□ 0.99
CSPG5-202ENST00000383738 BBOX1O75936 387 aa21.24■□□□□ 0.99
CSPG5-202ENST00000383738 CCT6AP40227 531 aaKnown RBP21.24■□□□□ 0.99
CSPG5-202ENST00000383738 MIGA2Q7L4E1 593 aa21.24■□□□□ 0.99
CSPG5-202ENST00000383738 RASGRP4Q8TDF6 673 aa21.24■□□□□ 0.99
CSPG5-202ENST00000383738 USP17L3A6NCW0 530 aa21.23■□□□□ 0.99
CSPG5-202ENST00000383738 USP17L4A6NCW7 530 aa21.23■□□□□ 0.99
CSPG5-202ENST00000383738 CHMP2AO43633 222 aa21.23■□□□□ 0.99
CSPG5-202ENST00000383738 ZNF202O95125 648 aa21.23■□□□□ 0.99
CSPG5-202ENST00000383738 GDF11O95390 407 aa21.23■□□□□ 0.99
CSPG5-202ENST00000383738 CCDC175P0C221 793 aa21.23■□□□□ 0.99
CSPG5-202ENST00000383738 USP17L1Q7RTZ2 530 aa21.23■□□□□ 0.99
CSPG5-202ENST00000383738 TAX1BP1Q86VP1 789 aa21.23■□□□□ 0.99
CSPG5-202ENST00000383738 FLAD1Q8NFF5 587 aa21.23■□□□□ 0.99
CSPG5-202ENST00000383738 CNKSR1Q969H4 720 aa21.23■□□□□ 0.99
CSPG5-202ENST00000383738 ZSCAN10Q96SZ4 725 aaPredicted RBP21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms