RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 EMBQ6PCB8 327 aa12.19□□□□□ -0.46
USP6NL-202ENST00000379237 CCDC197Q8NCU1 140 aa12.19□□□□□ -0.46
USP6NL-202ENST00000379237 TANGO6Q9C0B7 1094 aa12.19□□□□□ -0.46
USP6NL-202ENST00000379237 TRIM10Q9UDY6 481 aa12.19□□□□□ -0.46
USP6NL-202ENST00000379237 SH3BP1Q9Y3L3 701 aa12.19□□□□□ -0.46
USP6NL-202ENST00000379237 YEATS2Q9ULM3 1422 aa12.19□□□□□ -0.46
USP6NL-202ENST00000379237 A0A0U1RQJ8 604 aa12.19□□□□□ -0.46
USP6NL-202ENST00000379237 GMNCA6NCL1 334 aa12.19□□□□□ -0.46
USP6NL-202ENST00000379237 CLSTN1O94985 981 aa12.19□□□□□ -0.46
USP6NL-202ENST00000379237 NDUFA10O95299 355 aa12.19□□□□□ -0.46
USP6NL-202ENST00000379237 CCDC38Q502W7 563 aa12.19□□□□□ -0.46
USP6NL-202ENST00000379237 RCSD1Q6JBY9 416 aa12.19□□□□□ -0.46
USP6NL-202ENST00000379237 STAMQ92783 540 aa12.19□□□□□ -0.46
USP6NL-202ENST00000379237 RRP36Q96EU6 259 aaKnown RBP12.19□□□□□ -0.46
USP6NL-202ENST00000379237 IFT74Q96LB3 600 aa12.19□□□□□ -0.46
USP6NL-202ENST00000379237 TRIM47Q96LD4 638 aa12.19□□□□□ -0.46
USP6NL-202ENST00000379237 VCXQ9H320 206 aa12.19□□□□□ -0.46
USP6NL-202ENST00000379237 DUOX2Q9NRD8 1548 aa12.19□□□□□ -0.46
USP6NL-202ENST00000379237 TARSL2A2RTX5 802 aaKnown RBP12.19□□□□□ -0.46
USP6NL-202ENST00000379237 XBP1P17861 261 aa12.19□□□□□ -0.46
USP6NL-202ENST00000379237 PDIA3P30101 505 aaKnown RBP12.19□□□□□ -0.46
USP6NL-202ENST00000379237 RBM5P52756 815 aaKnown RBP eCLIP12.19□□□□□ -0.46
USP6NL-202ENST00000379237 SLC8A3P57103 927 aa12.19□□□□□ -0.46
USP6NL-202ENST00000379237 SLMAPQ14BN4 828 aa12.19□□□□□ -0.46
USP6NL-202ENST00000379237 WAPLQ7Z5K2 1190 aa12.19□□□□□ -0.46
USP6NL-202ENST00000379237 KLHL7Q8IXQ5 586 aa12.19□□□□□ -0.46
USP6NL-202ENST00000379237 KCNV2Q8TDN2 545 aa12.19□□□□□ -0.46
USP6NL-202ENST00000379237 EPB41L5Q9HCM4 733 aa12.19□□□□□ -0.46
USP6NL-202ENST00000379237 SALL3Q9BXA9 1300 aa12.19□□□□□ -0.46
USP6NL-202ENST00000379237 ZNF185O15231 689 aa12.19□□□□□ -0.46
USP6NL-202ENST00000379237 LAMB3Q13751 1172 aa12.19□□□□□ -0.46
USP6NL-202ENST00000379237 SPATA1Q5VX52 437 aa12.19□□□□□ -0.46
USP6NL-202ENST00000379237 CCDC26Q8TAB7 109 aa12.19□□□□□ -0.46
USP6NL-202ENST00000379237 NFU1Q9UMS0 254 aa12.19□□□□□ -0.46
USP6NL-202ENST00000379237 ERICH2A1L162 156 aa12.18□□□□□ -0.46
USP6NL-202ENST00000379237 PLCD1P51178 756 aa12.18□□□□□ -0.46
USP6NL-202ENST00000379237 MYCBPAPQ8TBZ2 947 aa12.18□□□□□ -0.46
USP6NL-202ENST00000379237 EAF2Q96CJ1 260 aaPredicted RBP12.18□□□□□ -0.46
USP6NL-202ENST00000379237 STAMBPL1Q96FJ0 436 aa12.18□□□□□ -0.46
USP6NL-202ENST00000379237 MAP3K2Q9Y2U5 619 aa12.18□□□□□ -0.46
USP6NL-202ENST00000379237 MAP3K5Q99683 1374 aa12.18□□□□□ -0.46
USP6NL-202ENST00000379237 FANCGO15287 622 aa12.18□□□□□ -0.46
USP6NL-202ENST00000379237 PDHA1P08559 390 aa12.18□□□□□ -0.46
USP6NL-202ENST00000379237 PLCB4Q15147 1175 aa12.18□□□□□ -0.46
USP6NL-202ENST00000379237 MTHFSDQ2M296 383 aaKnown RBP12.18□□□□□ -0.46
USP6NL-202ENST00000379237 RASGRP2Q7LDG7 609 aa12.18□□□□□ -0.46
USP6NL-202ENST00000379237 FUKQ8N0W3 1084 aa12.18□□□□□ -0.46
USP6NL-202ENST00000379237 CUL5Q93034 780 aa12.18□□□□□ -0.46
USP6NL-202ENST00000379237 FAXDC2Q96IV6 333 aa12.18□□□□□ -0.46
USP6NL-202ENST00000379237 CHPF2Q9P2E5 772 aa12.18□□□□□ -0.46
USP6NL-202ENST00000379237 TRPC6Q9Y210 931 aa12.18□□□□□ -0.46
USP6NL-202ENST00000379237 MAST1Q9Y2H9 1570 aa12.18□□□□□ -0.46
USP6NL-202ENST00000379237 GOLGA8AA7E2F4 631 aa12.18□□□□□ -0.46
USP6NL-202ENST00000379237 MDH1P40925 334 aaKnown RBP12.18□□□□□ -0.46
USP6NL-202ENST00000379237 CACNA2D4Q7Z3S7 1137 aa12.18□□□□□ -0.46
USP6NL-202ENST00000379237 SMYD4Q8IYR2 804 aaPredicted RBP12.18□□□□□ -0.46
USP6NL-202ENST00000379237 CYFIP2Q96F07 1278 aa12.18□□□□□ -0.46
USP6NL-202ENST00000379237 PTGISQ16647 500 aa12.18□□□□□ -0.46
USP6NL-202ENST00000379237 TSNAXIP1Q2TAA8 658 aa12.18□□□□□ -0.46
USP6NL-202ENST00000379237 SLC9C2Q5TAH2 1124 aa12.18□□□□□ -0.46
USP6NL-202ENST00000379237 KLHDC4Q8TBB5 520 aa12.18□□□□□ -0.46
USP6NL-202ENST00000379237 CCHCR1Q8TD31 782 aa12.18□□□□□ -0.46
USP6NL-202ENST00000379237 OSBPL1AQ9BXW6 950 aa12.18□□□□□ -0.46
USP6NL-202ENST00000379237 STIM2Q9P246 746 aa12.18□□□□□ -0.46
USP6NL-202ENST00000379237 URB2Q14146 1524 aaKnown RBP12.17□□□□□ -0.46
USP6NL-202ENST00000379237 ATP10BO94823 1461 aa12.17□□□□□ -0.46
USP6NL-202ENST00000379237 FOXN1O15353 648 aa12.17□□□□□ -0.46
USP6NL-202ENST00000379237 ANP32DO95626 131 aa12.17□□□□□ -0.46
USP6NL-202ENST00000379237 A1BGP04217 495 aa12.17□□□□□ -0.46
USP6NL-202ENST00000379237 GBP1P32455 592 aa12.17□□□□□ -0.46
USP6NL-202ENST00000379237 PRPHP41219 470 aa12.17□□□□□ -0.46
USP6NL-202ENST00000379237 KRT40Q6A162 431 aa12.17□□□□□ -0.46
USP6NL-202ENST00000379237 FAM210AQ96ND0 272 aa12.17□□□□□ -0.46
USP6NL-202ENST00000379237 LRRC1Q9BTT6 524 aa12.17□□□□□ -0.46
USP6NL-202ENST00000379237 CHCHD3Q9NX63 227 aaKnown RBP12.17□□□□□ -0.46
USP6NL-202ENST00000379237 ADCY9O60503 1353 aa12.17□□□□□ -0.46
USP6NL-202ENST00000379237 ESYT3A0FGR9 886 aa12.17□□□□□ -0.46
USP6NL-202ENST00000379237 KLHL33A6NCF5 533 aa12.17□□□□□ -0.46
USP6NL-202ENST00000379237 ZNF213O14771 459 aa12.17□□□□□ -0.46
USP6NL-202ENST00000379237 EVI5O60447 810 aa12.17□□□□□ -0.46
USP6NL-202ENST00000379237 PRPF6O94906 941 aaKnown RBP12.17□□□□□ -0.46
USP6NL-202ENST00000379237 HEXIM1O94992 359 aaKnown RBP12.17□□□□□ -0.46
USP6NL-202ENST00000379237 FAM107AO95990 144 aa12.17□□□□□ -0.46
USP6NL-202ENST00000379237 CDC25AP30304 524 aa12.17□□□□□ -0.46
USP6NL-202ENST00000379237 MRPL12P52815 198 aaKnown RBP12.17□□□□□ -0.46
USP6NL-202ENST00000379237 SSRP1Q08945 709 aaKnown RBP12.17□□□□□ -0.46
USP6NL-202ENST00000379237 BEND3Q5T5X7 828 aa12.17□□□□□ -0.46
USP6NL-202ENST00000379237 TTC36A6NLP5 189 aa12.17□□□□□ -0.46
USP6NL-202ENST00000379237 PDE4BQ07343 736 aa12.17□□□□□ -0.46
USP6NL-202ENST00000379237 CFAP221Q4G0U5 840 aa12.17□□□□□ -0.46
USP6NL-202ENST00000379237 ZNF483Q8TF39 744 aaPredicted RBP12.17□□□□□ -0.46
USP6NL-202ENST00000379237 WASF1Q92558 559 aa12.17□□□□□ -0.46
USP6NL-202ENST00000379237 LRRC45Q96CN5 670 aa12.17□□□□□ -0.46
USP6NL-202ENST00000379237 TSGA10Q9BZW7 698 aa12.17□□□□□ -0.46
USP6NL-202ENST00000379237 HMGB1P1B2RPK0 211 aaPredicted RBP12.16□□□□□ -0.46
USP6NL-202ENST00000379237 TTF1Q15361 905 aaPredicted RBP12.16□□□□□ -0.46
USP6NL-202ENST00000379237 NCOA7Q8NI08 942 aa12.16□□□□□ -0.46
USP6NL-202ENST00000379237 KLHL29Q96CT2 875 aa12.16□□□□□ -0.46
USP6NL-202ENST00000379237 KIAA0556O60303 1618 aa12.16□□□□□ -0.46
USP6NL-202ENST00000379237 CTNND1O60716 968 aaKnown RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms