RNA–Protein interactions for RNA: ENST00000378307.9

RAB4B-202, Transcript of RAB4B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB4B, Length 890 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4B-202ENST00000378307 C16orf86Q6ZW13 317 aa18.47■□□□□ 0.55
RAB4B-202ENST00000378307 CHD1LQ86WJ1 897 aa18.47■□□□□ 0.55
RAB4B-202ENST00000378307 CLEC10AQ8IUN9 316 aa18.47■□□□□ 0.55
RAB4B-202ENST00000378307 SIAH1Q8IUQ4 282 aa18.47■□□□□ 0.55
RAB4B-202ENST00000378307 TMOD4Q9NZQ9 345 aa18.47■□□□□ 0.55
RAB4B-202ENST00000378307 SWAP70Q9UH65 585 aa18.47■□□□□ 0.55
RAB4B-202ENST00000378307 TNRC18O15417 2968 aaPredicted RBP18.46■□□□□ 0.55
RAB4B-202ENST00000378307 PLEKHM2Q8IWE5 1019 aa18.46■□□□□ 0.55
RAB4B-202ENST00000378307 STK11IPQ8N1F8 1099 aa18.46■□□□□ 0.55
RAB4B-202ENST00000378307 ARMC5Q96C12 935 aa18.46■□□□□ 0.55
RAB4B-202ENST00000378307 C12orf42Q96LP6 360 aa18.46■□□□□ 0.55
RAB4B-202ENST00000378307 SRRDQ9UH36 339 aa18.46■□□□□ 0.55
RAB4B-202ENST00000378307 PNMA3Q9UL41 463 aa18.46■□□□□ 0.55
RAB4B-202ENST00000378307 GABRQQ9UN88 632 aa18.46■□□□□ 0.55
RAB4B-202ENST00000378307 FOXP2O15409 715 aa18.45■□□□□ 0.54
RAB4B-202ENST00000378307 GNRH1P01148 92 aa18.45■□□□□ 0.54
RAB4B-202ENST00000378307 PABPC4Q13310 644 aaKnown RBP eCLIP18.45■□□□□ 0.547e-6■■□□□ 14.2
RAB4B-202ENST00000378307 SBK1Q52WX2 424 aa18.45■□□□□ 0.54
RAB4B-202ENST00000378307 KIAA1755Q5JYT7 1200 aa18.45■□□□□ 0.54
RAB4B-202ENST00000378307 CCDC129Q6ZRS4 1044 aa18.45■□□□□ 0.54
RAB4B-202ENST00000378307 SH3TC2Q8TF17 1288 aa18.45■□□□□ 0.54
RAB4B-202ENST00000378307 KIAA1683Q9H0B3 1180 aa18.45■□□□□ 0.54
RAB4B-202ENST00000378307 KIAA0100Q14667 2235 aaKnown RBP18.45■□□□□ 0.54
RAB4B-202ENST00000378307 POTEFA5A3E0 1075 aa18.44■□□□□ 0.54
RAB4B-202ENST00000378307 MINDY4BA8MYZ0 360 aa18.44■□□□□ 0.54
RAB4B-202ENST00000378307 PATL2C9JE40 543 aaKnown RBP18.44■□□□□ 0.54
RAB4B-202ENST00000378307 FCGRTP55899 365 aa18.44■□□□□ 0.54
RAB4B-202ENST00000378307 PRKCZQ05513 592 aa18.44■□□□□ 0.54
RAB4B-202ENST00000378307 FAM110CQ1W6H9 321 aa18.44■□□□□ 0.54
RAB4B-202ENST00000378307 GIMAP6Q6P9H5 292 aa18.44■□□□□ 0.54
RAB4B-202ENST00000378307 IFNL3Q8IZI9 196 aa18.44■□□□□ 0.54
RAB4B-202ENST00000378307 EVI5LQ96CN4 794 aa18.44■□□□□ 0.54
RAB4B-202ENST00000378307 DDRGK1Q96HY6 314 aa18.44■□□□□ 0.54
RAB4B-202ENST00000378307 FEZ1Q99689 392 aa18.44■□□□□ 0.54
RAB4B-202ENST00000378307 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.44■□□□□ 0.54
RAB4B-202ENST00000378307 TXNRD2Q9NNW7 524 aa18.44■□□□□ 0.54
RAB4B-202ENST00000378307 ARPP21Q9UBL0 812 aaPredicted RBP18.44■□□□□ 0.54
RAB4B-202ENST00000378307 MYPNQ86TC9 1320 aa18.44■□□□□ 0.54
RAB4B-202ENST00000378307 APPP05067 770 aa18.43■□□□□ 0.54
RAB4B-202ENST00000378307 VCAM1P19320 739 aa18.43■□□□□ 0.54
RAB4B-202ENST00000378307 GCLCP48506 637 aaPredicted RBP18.43■□□□□ 0.54
RAB4B-202ENST00000378307 HERVK_113P62684 666 aa18.43■□□□□ 0.54
RAB4B-202ENST00000378307 IRX3P78415 501 aaPredicted RBP18.43■□□□□ 0.54
RAB4B-202ENST00000378307 TMEM179Q6ZVK1 233 aa18.43■□□□□ 0.54
RAB4B-202ENST00000378307 AMOTL1Q8IY63 956 aa18.43■□□□□ 0.54
RAB4B-202ENST00000378307 ZNF333Q96JL9 665 aa18.43■□□□□ 0.54
RAB4B-202ENST00000378307 RBPJLQ9UBG7 517 aa18.43■□□□□ 0.54
RAB4B-202ENST00000378307 MYCP01106 439 aaPredicted RBP18.42■□□□□ 0.54
RAB4B-202ENST00000378307 GNAT2P19087 354 aa18.42■□□□□ 0.54
RAB4B-202ENST00000378307 LRRFIP1Q32MZ4 808 aaKnown RBP18.42■□□□□ 0.54
RAB4B-202ENST00000378307 Q3C1V9 767 aa18.42■□□□□ 0.54
RAB4B-202ENST00000378307 SLC9C1Q4G0N8 1177 aa18.42■□□□□ 0.54
RAB4B-202ENST00000378307 FAM227BQ96M60 508 aa18.42■□□□□ 0.54
RAB4B-202ENST00000378307 GREB1LQ9C091 1923 aaPredicted RBP18.42■□□□□ 0.54
RAB4B-202ENST00000378307 RASA1P20936 1047 aa18.41■□□□□ 0.54
RAB4B-202ENST00000378307 TDO2P48775 406 aa18.41■□□□□ 0.54
RAB4B-202ENST00000378307 USP14P54578 494 aa18.41■□□□□ 0.54
RAB4B-202ENST00000378307 PRMT2P55345 433 aa18.41■□□□□ 0.54
RAB4B-202ENST00000378307 MLLT1Q03111 559 aaPredicted RBP18.41■□□□□ 0.54
RAB4B-202ENST00000378307 VPS53Q5VIR6 699 aa18.41■□□□□ 0.54
RAB4B-202ENST00000378307 CATSPERGQ6ZRH7 1159 aa18.41■□□□□ 0.54
RAB4B-202ENST00000378307 CCDC17Q96LX7 622 aa18.41■□□□□ 0.54
RAB4B-202ENST00000378307 OSBPL3Q9H4L5 887 aa18.41■□□□□ 0.54
RAB4B-202ENST00000378307 MORF4L1Q9UBU8 362 aa18.41■□□□□ 0.54
RAB4B-202ENST00000378307 TAOK2Q9UL54 1235 aa18.41■□□□□ 0.54
RAB4B-202ENST00000378307 RLFQ13129 1914 aa18.41■□□□□ 0.54
RAB4B-202ENST00000378307 ROBO3Q96MS0 1386 aa18.41■□□□□ 0.54
RAB4B-202ENST00000378307 PLXNB2O15031 1838 aa18.4■□□□□ 0.54
RAB4B-202ENST00000378307 A0A0D9SFI3 127 aa18.4■□□□□ 0.54
RAB4B-202ENST00000378307 USP17L15C9J2P7 530 aa18.4■□□□□ 0.54
RAB4B-202ENST00000378307 USP17L13C9JLJ4 530 aa18.4■□□□□ 0.54
RAB4B-202ENST00000378307 USP17L11C9JVI0 530 aa18.4■□□□□ 0.54
RAB4B-202ENST00000378307 USP17L18D6R9N7 530 aa18.4■□□□□ 0.54
RAB4B-202ENST00000378307 USP17L22D6RA61 530 aa18.4■□□□□ 0.54
RAB4B-202ENST00000378307 USP17L17D6RBQ6 530 aa18.4■□□□□ 0.54
RAB4B-202ENST00000378307 USP17L19D6RCP7 530 aa18.4■□□□□ 0.54
RAB4B-202ENST00000378307 USP17L20D6RJB6 530 aa18.4■□□□□ 0.54
RAB4B-202ENST00000378307 TNPO2O14787 897 aaKnown RBP18.4■□□□□ 0.54
RAB4B-202ENST00000378307 CNMDO75829 334 aa18.4■□□□□ 0.54
RAB4B-202ENST00000378307 PDE4AP27815 886 aa18.4■□□□□ 0.54
RAB4B-202ENST00000378307 HOXD10P28358 340 aa18.4■□□□□ 0.54
RAB4B-202ENST00000378307 FLT3LGP49771 235 aa18.4■□□□□ 0.54
RAB4B-202ENST00000378307 USP17L24Q0WX57 530 aa18.4■□□□□ 0.54
RAB4B-202ENST00000378307 RPAP3Q9H6T3 665 aaPredicted RBP18.4■□□□□ 0.54
RAB4B-202ENST00000378307 TRIM6-TRIM34B2RNG4 842 aa18.39■□□□□ 0.53
RAB4B-202ENST00000378307 PRDM1O75626 825 aa18.39■□□□□ 0.53
RAB4B-202ENST00000378307 EEF2P13639 858 aaKnown RBP18.39■□□□□ 0.53
RAB4B-202ENST00000378307 ICA1Q05084 483 aa18.39■□□□□ 0.53
RAB4B-202ENST00000378307 MTFR1Q15390 333 aa18.39■□□□□ 0.53
RAB4B-202ENST00000378307 RAET1EQ8TD07 263 aa18.39■□□□□ 0.53
RAB4B-202ENST00000378307 RILPL2Q969X0 211 aa18.39■□□□□ 0.53
RAB4B-202ENST00000378307 PAGR1Q9BTK6 254 aa18.39■□□□□ 0.53
RAB4B-202ENST00000378307 TMX2Q9Y320 296 aa18.39■□□□□ 0.53
RAB4B-202ENST00000378307 TACC3Q9Y6A5 838 aa18.39■□□□□ 0.53
RAB4B-202ENST00000378307 RBBP6Q7Z6E9 1792 aaKnown RBP18.39■□□□□ 0.53
RAB4B-202ENST00000378307 NMIQ13287 307 aaPredicted RBP18.38■□□□□ 0.53
RAB4B-202ENST00000378307 NBPF11Q86T75 865 aa18.38■□□□□ 0.53
RAB4B-202ENST00000378307 PORCNQ9H237 461 aa18.38■□□□□ 0.53
RAB4B-202ENST00000378307 HELLSQ9NRZ9 838 aa18.38■□□□□ 0.53
RAB4B-202ENST00000378307 GJD2Q9UKL4 321 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms