RNA–Protein interactions for RNA: ENST00000377507.7

TNFRSF9-201, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF9, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-201ENST00000377507 OGFRQ9NZT2 677 aa13.43□□□□□ -0.26
TNFRSF9-201ENST00000377507 VPS54Q9P1Q0 977 aa13.43□□□□□ -0.26
TNFRSF9-201ENST00000377507 NFE2L3Q9Y4A8 694 aa13.43□□□□□ -0.26
TNFRSF9-201ENST00000377507 V9GY48 417 aaPredicted RBP13.43□□□□□ -0.26
TNFRSF9-201ENST00000377507 PHLPP2Q6ZVD8 1323 aa13.43□□□□□ -0.26
TNFRSF9-201ENST00000377507 CYP2D7A0A087X1C5 515 aa13.43□□□□□ -0.26
TNFRSF9-201ENST00000377507 ARHGAP6O43182 974 aa13.43□□□□□ -0.26
TNFRSF9-201ENST00000377507 PLEKHA8P1O95397 391 aa13.43□□□□□ -0.26
TNFRSF9-201ENST00000377507 SLFN14P0C7P3 912 aa13.43□□□□□ -0.26
TNFRSF9-201ENST00000377507 ZSCAN20P17040 1043 aaPredicted RBP13.43□□□□□ -0.26
TNFRSF9-201ENST00000377507 PLCD1P51178 756 aa13.43□□□□□ -0.26
TNFRSF9-201ENST00000377507 CBX1P83916 185 aa13.43□□□□□ -0.26
TNFRSF9-201ENST00000377507 SYT10Q6XYQ8 523 aa13.43□□□□□ -0.26
TNFRSF9-201ENST00000377507 TMTC3Q6ZXV5 915 aa13.43□□□□□ -0.26
TNFRSF9-201ENST00000377507 NUTM2AQ8IVF1 878 aaPredicted RBP13.43□□□□□ -0.26
TNFRSF9-201ENST00000377507 REXO1L1PQ8IX06 675 aa13.43□□□□□ -0.26
TNFRSF9-201ENST00000377507 LINC00116Q8NCU8 138 aa13.43□□□□□ -0.26
TNFRSF9-201ENST00000377507 CELF1Q92879 486 aaKnown RBP13.43□□□□□ -0.26
TNFRSF9-201ENST00000377507 DDX41Q9UJV9 622 aaKnown RBP13.43□□□□□ -0.26
TNFRSF9-201ENST00000377507 FAM205CA6NFA0 338 aa13.42□□□□□ -0.26
TNFRSF9-201ENST00000377507 KCNQ2O43526 872 aa13.42□□□□□ -0.26
TNFRSF9-201ENST00000377507 NR1I3Q14994 352 aa13.42□□□□□ -0.26
TNFRSF9-201ENST00000377507 ZNF397Q8NF99 534 aaPredicted RBP13.42□□□□□ -0.26
TNFRSF9-201ENST00000377507 CCDC34Q96HJ3 373 aa13.42□□□□□ -0.26
TNFRSF9-201ENST00000377507 CNTNAP4Q9C0A0 1308 aa13.42□□□□□ -0.26
TNFRSF9-201ENST00000377507 A0A087X0B3 334 aa13.41□□□□□ -0.26
TNFRSF9-201ENST00000377507 USP17L12C9JPN9 530 aa13.41□□□□□ -0.26
TNFRSF9-201ENST00000377507 USP17L21D6R901 530 aa13.41□□□□□ -0.26
TNFRSF9-201ENST00000377507 STX10O60499 249 aa13.41□□□□□ -0.26
TNFRSF9-201ENST00000377507 ADAMTS2O95450 1211 aa13.41□□□□□ -0.26
TNFRSF9-201ENST00000377507 SBK1Q52WX2 424 aa13.41□□□□□ -0.26
TNFRSF9-201ENST00000377507 SPECC1LQ69YQ0 1117 aa13.41□□□□□ -0.26
TNFRSF9-201ENST00000377507 APTXQ7Z2E3 356 aaKnown RBP13.41□□□□□ -0.26
TNFRSF9-201ENST00000377507 GRAMD1CQ8IYS0 662 aa13.41□□□□□ -0.26
TNFRSF9-201ENST00000377507 ATP8A2Q9NTI2 1148 aa13.41□□□□□ -0.26
TNFRSF9-201ENST00000377507 MYH6P13533 1939 aa13.41□□□□□ -0.26
TNFRSF9-201ENST00000377507 MYH2Q9UKX2 1941 aa13.41□□□□□ -0.26
TNFRSF9-201ENST00000377507 CNTNAP5Q8WYK1 1306 aa13.41□□□□□ -0.26
TNFRSF9-201ENST00000377507 A0A0G2JS52 829 aa13.41□□□□□ -0.26
TNFRSF9-201ENST00000377507 A0A1B0GTH6 734 aa13.41□□□□□ -0.26
TNFRSF9-201ENST00000377507 NT5C2P49902 561 aa13.41□□□□□ -0.26
TNFRSF9-201ENST00000377507 RPS8P62241 208 aaKnown RBP13.41□□□□□ -0.26
TNFRSF9-201ENST00000377507 MECOMQ03112 1051 aa13.41□□□□□ -0.26
TNFRSF9-201ENST00000377507 KMT5BQ4FZB7 885 aa13.41□□□□□ -0.26
TNFRSF9-201ENST00000377507 PDILTQ8N807 584 aa13.41□□□□□ -0.26
TNFRSF9-201ENST00000377507 TC2NQ8N9U0 490 aa13.41□□□□□ -0.26
TNFRSF9-201ENST00000377507 PAGE5Q96GU1 130 aa13.41□□□□□ -0.26
TNFRSF9-201ENST00000377507 EPSTI1Q96J88 318 aa13.41□□□□□ -0.26
TNFRSF9-201ENST00000377507 DCP1AQ9NPI6 582 aaPredicted RBP13.41□□□□□ -0.26
TNFRSF9-201ENST00000377507 FAM53CQ9NYF3 392 aa13.41□□□□□ -0.26
TNFRSF9-201ENST00000377507 CASZ1Q86V15 1759 aa13.4□□□□□ -0.26
TNFRSF9-201ENST00000377507 WNT7AO00755 349 aa13.4□□□□□ -0.26
TNFRSF9-201ENST00000377507 ZSCAN12O43309 604 aa13.4□□□□□ -0.26
TNFRSF9-201ENST00000377507 IGSF3O75054 1194 aa13.4□□□□□ -0.26
TNFRSF9-201ENST00000377507 PRDM1O75626 825 aa13.4□□□□□ -0.26
TNFRSF9-201ENST00000377507 ATP2B1P20020 1258 aa13.4□□□□□ -0.26
TNFRSF9-201ENST00000377507 TRAPPC10P48553 1259 aa13.4□□□□□ -0.26
TNFRSF9-201ENST00000377507 ATP2C1P98194 919 aaPredicted RBP13.4□□□□□ -0.26
TNFRSF9-201ENST00000377507 DPYDQ12882 1025 aa13.4□□□□□ -0.26
TNFRSF9-201ENST00000377507 CUL4BQ13620 913 aa13.4□□□□□ -0.26
TNFRSF9-201ENST00000377507 ZNF827Q17R98 1081 aa13.4□□□□□ -0.26
TNFRSF9-201ENST00000377507 UTP14CQ5TAP6 766 aaKnown RBP13.4□□□□□ -0.26
TNFRSF9-201ENST00000377507 SRBD1Q8N5C6 995 aaKnown RBP13.4□□□□□ -0.26
TNFRSF9-201ENST00000377507 GSDMAQ96QA5 445 aa13.4□□□□□ -0.26
TNFRSF9-201ENST00000377507 BRMS1Q9HCU9 246 aa13.4□□□□□ -0.26
TNFRSF9-201ENST00000377507 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.4□□□□□ -0.26
TNFRSF9-201ENST00000377507 BAZ2AQ9UIF9 1905 aaKnown RBP13.4□□□□□ -0.26
TNFRSF9-201ENST00000377507 TAF1P21675 1872 aa13.39□□□□□ -0.27
TNFRSF9-201ENST00000377507 SPDYE4A6NLX3 237 aa13.39□□□□□ -0.27
TNFRSF9-201ENST00000377507 KLRK1P26718 216 aa13.39□□□□□ -0.27
TNFRSF9-201ENST00000377507 SPATA1Q5VX52 437 aa13.39□□□□□ -0.27
TNFRSF9-201ENST00000377507 TBC1D9BQ66K14 1250 aa13.39□□□□□ -0.27
TNFRSF9-201ENST00000377507 SYMPKQ92797 1274 aaKnown RBP13.39□□□□□ -0.27
TNFRSF9-201ENST00000377507 DHX58Q96C10 678 aa13.39□□□□□ -0.27
TNFRSF9-201ENST00000377507 BAG1Q99933 345 aaPredicted RBP13.39□□□□□ -0.27
TNFRSF9-201ENST00000377507 CRNKL1Q9BZJ0 848 aaKnown RBP13.39□□□□□ -0.27
TNFRSF9-201ENST00000377507 NYXQ9GZU5 481 aa13.39□□□□□ -0.27
TNFRSF9-201ENST00000377507 ANKRD2Q9GZV1 360 aa13.39□□□□□ -0.27
TNFRSF9-201ENST00000377507 SAMSN1Q9NSI8 373 aaKnown RBP13.39□□□□□ -0.27
TNFRSF9-201ENST00000377507 IRS2Q9Y4H2 1338 aa13.39□□□□□ -0.27
TNFRSF9-201ENST00000377507 VWA3AA6NCI4 1184 aa13.39□□□□□ -0.27
TNFRSF9-201ENST00000377507 GOLGA6L9A6NEM1 432 aa13.39□□□□□ -0.27
TNFRSF9-201ENST00000377507 FANCGO15287 622 aa13.39□□□□□ -0.27
TNFRSF9-201ENST00000377507 CDK11BP21127 795 aaKnown RBP13.39□□□□□ -0.27
TNFRSF9-201ENST00000377507 HIBADHP31937 336 aaKnown RBP13.39□□□□□ -0.27
TNFRSF9-201ENST00000377507 ELF2Q15723 593 aa13.39□□□□□ -0.27
TNFRSF9-201ENST00000377507 E2F4Q16254 413 aa13.39□□□□□ -0.27
TNFRSF9-201ENST00000377507 TTC38Q5R3I4 469 aa13.39□□□□□ -0.27
TNFRSF9-201ENST00000377507 RC3H1Q5TC82 1133 aaKnown RBP13.39□□□□□ -0.27
TNFRSF9-201ENST00000377507 CDKAL1Q5VV42 579 aa13.39□□□□□ -0.27
TNFRSF9-201ENST00000377507 HOMER1Q86YM7 354 aa13.39□□□□□ -0.27
TNFRSF9-201ENST00000377507 TRMT44Q8IYL2 757 aaKnown RBP13.39□□□□□ -0.27
TNFRSF9-201ENST00000377507 SRRTQ9BXP5 876 aaKnown RBP13.39□□□□□ -0.27
TNFRSF9-201ENST00000377507 BCL11BQ9C0K0 894 aaPredicted RBP13.39□□□□□ -0.27
TNFRSF9-201ENST00000377507 ARPP21Q9UBL0 812 aaPredicted RBP13.39□□□□□ -0.27
TNFRSF9-201ENST00000377507 NARFQ9UHQ1 456 aa13.39□□□□□ -0.27
TNFRSF9-201ENST00000377507 PPP2R2CQ9Y2T4 447 aa13.39□□□□□ -0.27
TNFRSF9-201ENST00000377507 hCG_1642624A0A1W2PR95 340 aa13.38□□□□□ -0.27
TNFRSF9-201ENST00000377507 CD44P16070 742 aaKnown RBP13.38□□□□□ -0.27
TNFRSF9-201ENST00000377507 H2AFXP16104 143 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms