RNA–Protein interactions for RNA: ENST00000376646.3

VPS13A-206, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5 BASIC

Gene VPS13A, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-206ENST00000376646 KBTBD4Q9NVX7 518 aa4.03□□□□□ -1.76
VPS13A-206ENST00000376646 TLR3O15455 904 aaKnown RBP4.02□□□□□ -1.77
VPS13A-206ENST00000376646 LRRN2O75325 713 aa4.02□□□□□ -1.77
VPS13A-206ENST00000376646 ZNF124Q15973 351 aa4.02□□□□□ -1.77
VPS13A-206ENST00000376646 GOLM1Q8NBJ4 401 aa4.02□□□□□ -1.77
VPS13A-206ENST00000376646 GIPC2Q8TF65 315 aa4.02□□□□□ -1.77
VPS13A-206ENST00000376646 PPP1R13LQ8WUF5 828 aa4.02□□□□□ -1.77
VPS13A-206ENST00000376646 TMEM74Q96NL1 305 aa4.02□□□□□ -1.77
VPS13A-206ENST00000376646 C19orf73Q9NVV2 129 aa4.02□□□□□ -1.77
VPS13A-206ENST00000376646 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.02□□□□□ -1.77
VPS13A-206ENST00000376646 KLHL3Q9UH77 587 aa4.02□□□□□ -1.77
VPS13A-206ENST00000376646 POLR3KQ9Y2Y1 108 aaPredicted RBP4.02□□□□□ -1.77
VPS13A-206ENST00000376646 BIN1O00499 593 aa4.02□□□□□ -1.77
VPS13A-206ENST00000376646 C8AP07357 584 aa4.02□□□□□ -1.77
VPS13A-206ENST00000376646 LMNB2Q03252 620 aa4.02□□□□□ -1.77
VPS13A-206ENST00000376646 SLC6A19Q695T7 634 aa4.02□□□□□ -1.77
VPS13A-206ENST00000376646 FAM13CQ8NE31 585 aa4.02□□□□□ -1.77
VPS13A-206ENST00000376646 GATAD2BQ8WXI9 593 aa4.02□□□□□ -1.77
VPS13A-206ENST00000376646 KRTAP9-3Q9BYQ3 159 aa4.02□□□□□ -1.77
VPS13A-206ENST00000376646 CTNND2Q9UQB3 1225 aa4.02□□□□□ -1.77
VPS13A-206ENST00000376646 CHURC1-FNTBB4DL54 471 aa4.01□□□□□ -1.77
VPS13A-206ENST00000376646 BPNT1O95861 308 aa4.01□□□□□ -1.77
VPS13A-206ENST00000376646 PDE4BQ07343 736 aa4.01□□□□□ -1.77
VPS13A-206ENST00000376646 SNAP47Q5SQN1 464 aa4.01□□□□□ -1.77
VPS13A-206ENST00000376646 LIN37Q96GY3 246 aaPredicted RBP4.01□□□□□ -1.77
VPS13A-206ENST00000376646 BCL2L13Q9BXK5 485 aa4.01□□□□□ -1.77
VPS13A-206ENST00000376646 REV1Q9UBZ9 1251 aa4.01□□□□□ -1.77
VPS13A-206ENST00000376646 ZNF503-AS2A6NEH8 195 aa4.01□□□□□ -1.77
VPS13A-206ENST00000376646 RLBP1P12271 317 aa4.01□□□□□ -1.77
VPS13A-206ENST00000376646 GARTP22102 1010 aa4.01□□□□□ -1.77
VPS13A-206ENST00000376646 RALGPS1Q5JS13 557 aa4.01□□□□□ -1.77
VPS13A-206ENST00000376646 C22orf34Q6ZV56 151 aa4.01□□□□□ -1.77
VPS13A-206ENST00000376646 RELL1Q8IUW5 271 aa4.01□□□□□ -1.77
VPS13A-206ENST00000376646 BAHD1Q8TBE0 780 aaPredicted RBP4.01□□□□□ -1.77
VPS13A-206ENST00000376646 TACC3Q9Y6A5 838 aa4.01□□□□□ -1.77
VPS13A-206ENST00000376646 DNAJC25-GNG10A0A024R161 153 aa4□□□□□ -1.77
VPS13A-206ENST00000376646 HTR3BO95264 441 aa4□□□□□ -1.77
VPS13A-206ENST00000376646 ERVFC1P60507 584 aa4□□□□□ -1.77
VPS13A-206ENST00000376646 FBXL19Q6PCT2 694 aa4□□□□□ -1.77
VPS13A-206ENST00000376646 POU5F2Q8N7G0 328 aa4□□□□□ -1.77
VPS13A-206ENST00000376646 FLAD1Q8NFF5 587 aa4□□□□□ -1.77
VPS13A-206ENST00000376646 KCNK12Q9HB15 430 aa4□□□□□ -1.77
VPS13A-206ENST00000376646 SLAMF8Q9P0V8 285 aa4□□□□□ -1.77
VPS13A-206ENST00000376646 ADAM30Q9UKF2 790 aa4□□□□□ -1.77
VPS13A-206ENST00000376646 CEP131Q9UPN4 1083 aa4□□□□□ -1.77
VPS13A-206ENST00000376646 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4□□□□□ -1.77
VPS13A-206ENST00000376646 ESR1P03372 595 aa4□□□□□ -1.77
VPS13A-206ENST00000376646 ZNF746Q6NUN9 644 aaPredicted RBP4□□□□□ -1.77
VPS13A-206ENST00000376646 ZSWIM9Q86XI8 627 aa4□□□□□ -1.77
VPS13A-206ENST00000376646 CYB5D2Q8WUJ1 264 aa4□□□□□ -1.77
VPS13A-206ENST00000376646 RSRP1Q9BUV0 290 aa4□□□□□ -1.77
VPS13A-206ENST00000376646 DUSP15Q9H1R2 295 aaPredicted RBP4□□□□□ -1.77
VPS13A-206ENST00000376646 JAG2Q9Y219 1238 aa4□□□□□ -1.77
VPS13A-206ENST00000376646 CYP7A1P22680 504 aa3.99□□□□□ -1.77
VPS13A-206ENST00000376646 CRKP46108 304 aa3.99□□□□□ -1.77
VPS13A-206ENST00000376646 KCNMB1Q16558 191 aa3.99□□□□□ -1.77
VPS13A-206ENST00000376646 ERMP1Q7Z2K6 904 aa3.99□□□□□ -1.77
VPS13A-206ENST00000376646 REC114Q7Z4M0 266 aa3.99□□□□□ -1.77
VPS13A-206ENST00000376646 CREG2Q8IUH2 290 aa3.99□□□□□ -1.77
VPS13A-206ENST00000376646 DTWD2Q8NBA8 298 aa3.99□□□□□ -1.77
VPS13A-206ENST00000376646 SHISA3A0PJX4 238 aa3.98□□□□□ -1.77
VPS13A-206ENST00000376646 LRRC10BA6NIK2 292 aa3.98□□□□□ -1.77
VPS13A-206ENST00000376646 TPP2P29144 1249 aaPredicted RBP3.98□□□□□ -1.77
VPS13A-206ENST00000376646 ETV3P41162 512 aa3.98□□□□□ -1.77
VPS13A-206ENST00000376646 KIR3DL1P43629 444 aa3.98□□□□□ -1.77
VPS13A-206ENST00000376646 TNNI2P48788 182 aa3.98□□□□□ -1.77
VPS13A-206ENST00000376646 HK2P52789 917 aa3.98□□□□□ -1.77
VPS13A-206ENST00000376646 MLANAQ16655 118 aa3.98□□□□□ -1.77
VPS13A-206ENST00000376646 TMEM201Q5SNT2 666 aa3.98□□□□□ -1.77
VPS13A-206ENST00000376646 CCDC84Q86UT8 332 aaPredicted RBP3.98□□□□□ -1.77
VPS13A-206ENST00000376646 ALPK1Q96QP1 1244 aa3.98□□□□□ -1.77
VPS13A-206ENST00000376646 KIF2CQ99661 725 aa3.98□□□□□ -1.77
VPS13A-206ENST00000376646 BRMS1Q9HCU9 246 aa3.98□□□□□ -1.77
VPS13A-206ENST00000376646 LMCD1Q9NZU5 365 aa3.98□□□□□ -1.77
VPS13A-206ENST00000376646 POLR2BP30876 1174 aaKnown RBP3.98□□□□□ -1.77
VPS13A-206ENST00000376646 TRHRP34981 398 aaPredicted RBP3.98□□□□□ -1.77
VPS13A-206ENST00000376646 YARSP54577 528 aaKnown RBP3.98□□□□□ -1.77
VPS13A-206ENST00000376646 MRPL58Q14197 206 aaKnown RBP3.98□□□□□ -1.77
VPS13A-206ENST00000376646 FAM196AQ6ZSG2 479 aa3.98□□□□□ -1.77
VPS13A-206ENST00000376646 THAP5Q7Z6K1 395 aa3.98□□□□□ -1.77
VPS13A-206ENST00000376646 PHACTR4Q8IZ21 702 aa3.98□□□□□ -1.77
VPS13A-206ENST00000376646 ADAMTS10Q9H324 1103 aa3.98□□□□□ -1.77
VPS13A-206ENST00000376646 ADAMTS1Q9UHI8 967 aa3.98□□□□□ -1.77
VPS13A-206ENST00000376646 PRR36Q9H6K5 1346 aa3.97□□□□□ -1.77
VPS13A-206ENST00000376646 PRR23BQ6ZRT6 265 aa3.97□□□□□ -1.77
VPS13A-206ENST00000376646 TTC6Q86TZ1 520 aa3.97□□□□□ -1.77
VPS13A-206ENST00000376646 SLFN12Q8IYM2 578 aa3.97□□□□□ -1.77
VPS13A-206ENST00000376646 TMEM40Q8WWA1 233 aa3.97□□□□□ -1.77
VPS13A-206ENST00000376646 KIRREL1Q96J84 757 aa3.97□□□□□ -1.77
VPS13A-206ENST00000376646 UBP1Q9NZI7 540 aa3.97□□□□□ -1.77
VPS13A-206ENST00000376646 GGT7Q9UJ14 662 aa3.97□□□□□ -1.77
VPS13A-206ENST00000376646 PCDHB14Q9Y5E9 798 aa3.97□□□□□ -1.77
VPS13A-206ENST00000376646 B8ZZF3 427 aa3.97□□□□□ -1.77
VPS13A-206ENST00000376646 EIF4A3P38919 411 aaKnown RBP3.97□□□□□ -1.77
VPS13A-206ENST00000376646 MPP2Q14168 576 aa3.97□□□□□ -1.77
VPS13A-206ENST00000376646 GAB4Q2WGN9 574 aa3.97□□□□□ -1.77
VPS13A-206ENST00000376646 ARSHQ5FYA8 562 aa3.97□□□□□ -1.77
VPS13A-206ENST00000376646 LDLRAD1Q5T700 205 aa3.97□□□□□ -1.77
VPS13A-206ENST00000376646 ZNF296Q8WUU4 475 aaPredicted RBP3.97□□□□□ -1.77
VPS13A-206ENST00000376646 KREMEN1Q96MU8 473 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms