RNA–Protein interactions for RNA: ENST00000376228.9

HLA-C-201, Transcript of major histocompatibility complex, class I, C, humanhuman

APPRIS P2 BASIC

Gene HLA-C, Length 1,536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-201ENST00000376228 DDX4Q9NQI0 724 aaKnown RBP24.76■■□□□ 1.55
HLA-C-201ENST00000376228 GPHNQ9NQX3 736 aaPredicted RBP24.76■■□□□ 1.55
HLA-C-201ENST00000376228 BRPF3Q9ULD4 1205 aa24.76■■□□□ 1.55
HLA-C-201ENST00000376228 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.76■■□□□ 1.55
HLA-C-201ENST00000376228 DDX60LQ5H9U9 1706 aaKnown RBP24.76■■□□□ 1.55
HLA-C-201ENST00000376228 GOLGA6L22H0YM25 854 aa24.75■■□□□ 1.55
HLA-C-201ENST00000376228 DHX16O60231 1041 aaKnown RBP24.75■■□□□ 1.55
HLA-C-201ENST00000376228 WDHD1O75717 1129 aaPredicted RBP24.75■■□□□ 1.55
HLA-C-201ENST00000376228 SLC3A2P08195 630 aaKnown RBP24.75■■□□□ 1.55
HLA-C-201ENST00000376228 ZSCAN22P10073 491 aaPredicted RBP24.75■■□□□ 1.55
HLA-C-201ENST00000376228 CTCFP49711 727 aaPredicted RBP24.75■■□□□ 1.55
HLA-C-201ENST00000376228 LBX1P52954 281 aa24.75■■□□□ 1.55
HLA-C-201ENST00000376228 RHBDL3P58872 404 aa24.75■■□□□ 1.55
HLA-C-201ENST00000376228 COL13A1Q5TAT6 717 aaPredicted RBP24.75■■□□□ 1.55
HLA-C-201ENST00000376228 MIGA2Q7L4E1 593 aa24.75■■□□□ 1.55
HLA-C-201ENST00000376228 TMTC2Q8N394 836 aa24.75■■□□□ 1.55
HLA-C-201ENST00000376228 NSUN7Q8NE18 718 aaKnown RBP24.75■■□□□ 1.55
HLA-C-201ENST00000376228 SH3RF3Q8TEJ3 882 aaPredicted RBP24.75■■□□□ 1.55
HLA-C-201ENST00000376228 SLC10A4Q96EP9 437 aa24.75■■□□□ 1.55
HLA-C-201ENST00000376228 INCENPQ9NQS7 918 aa24.75■■□□□ 1.55
HLA-C-201ENST00000376228 KLF18A0A0U1RQI7 1052 aa24.74■■□□□ 1.55
HLA-C-201ENST00000376228 HSPA8P11142 646 aaKnown RBP24.74■■□□□ 1.55
HLA-C-201ENST00000376228 SART3Q15020 963 aaKnown RBP24.74■■□□□ 1.55
HLA-C-201ENST00000376228 ANKRD13AQ8IZ07 590 aa24.74■■□□□ 1.55
HLA-C-201ENST00000376228 IDI2Q9BXS1 227 aa24.74■■□□□ 1.55
HLA-C-201ENST00000376228 LY9Q9HBG7 655 aa24.74■■□□□ 1.55
HLA-C-201ENST00000376228 HPS5Q9UPZ3 1129 aa24.74■■□□□ 1.55
HLA-C-201ENST00000376228 ROBO3Q96MS0 1386 aa24.74■■□□□ 1.55
HLA-C-201ENST00000376228 USP5P45974 858 aa24.73■■□□□ 1.55
HLA-C-201ENST00000376228 NID2Q14112 1375 aa24.73■■□□□ 1.55
HLA-C-201ENST00000376228 C12orf60Q5U649 245 aa24.73■■□□□ 1.55
HLA-C-201ENST00000376228 LARP1BQ659C4 914 aaKnown RBP24.73■■□□□ 1.55
HLA-C-201ENST00000376228 ELP3Q9H9T3 547 aa24.73■■□□□ 1.55
HLA-C-201ENST00000376228 MTMR6Q9Y217 621 aa24.73■■□□□ 1.55
HLA-C-201ENST00000376228 KIF3AQ9Y496 699 aa24.73■■□□□ 1.55
HLA-C-201ENST00000376228 MYH1P12882 1939 aa24.73■■□□□ 1.55
HLA-C-201ENST00000376228 CTDNEP1O95476 244 aa24.72■■□□□ 1.55
HLA-C-201ENST00000376228 RCAN1P53805 252 aa24.72■■□□□ 1.55
HLA-C-201ENST00000376228 TMEM67Q5HYA8 995 aa24.72■■□□□ 1.55
HLA-C-201ENST00000376228 SPRYD7Q5W111 196 aa24.72■■□□□ 1.55
HLA-C-201ENST00000376228 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.72■■□□□ 1.55
HLA-C-201ENST00000376228 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.72■■□□□ 1.552e-7■□□□□ 10.1
HLA-C-201ENST00000376228 IFIT3O14879 490 aaKnown RBP24.71■■□□□ 1.55
HLA-C-201ENST00000376228 VGLL4Q14135 290 aa24.71■■□□□ 1.55
HLA-C-201ENST00000376228 RGS22Q8NE09 1264 aa24.71■■□□□ 1.55
HLA-C-201ENST00000376228 WNK4Q96J92 1243 aa24.71■■□□□ 1.55
HLA-C-201ENST00000376228 WRNIP1Q96S55 665 aa24.71■■□□□ 1.55
HLA-C-201ENST00000376228 CYP2D7A0A087X1C5 515 aa24.71■■□□□ 1.55
HLA-C-201ENST00000376228 ENTPD3O75355 529 aa24.71■■□□□ 1.55
HLA-C-201ENST00000376228 APOA5Q6Q788 366 aa24.71■■□□□ 1.55
HLA-C-201ENST00000376228 SH3BP5LQ7L8J4 393 aa24.71■■□□□ 1.55
HLA-C-201ENST00000376228 ZSCAN29Q8IWY8 852 aaPredicted RBP24.71■■□□□ 1.55
HLA-C-201ENST00000376228 MCM9Q9NXL9 1143 aa24.71■■□□□ 1.55
HLA-C-201ENST00000376228 ATP6V1DQ9Y5K8 247 aa24.71■■□□□ 1.55
HLA-C-201ENST00000376228 TCHHQ07283 1943 aa24.7■■□□□ 1.55
HLA-C-201ENST00000376228 DDTLA6NHG4 134 aaPredicted RBP24.7■■□□□ 1.54
HLA-C-201ENST00000376228 GOLGA8BA8MQT2 603 aa24.7■■□□□ 1.54
HLA-C-201ENST00000376228 F13A1P00488 732 aa24.7■■□□□ 1.54
HLA-C-201ENST00000376228 GJA5P36382 358 aa24.7■■□□□ 1.54
HLA-C-201ENST00000376228 CCT2P78371 535 aaKnown RBP24.7■■□□□ 1.54
HLA-C-201ENST00000376228 MAP3K9P80192 1104 aa24.7■■□□□ 1.54
HLA-C-201ENST00000376228 PDE4BQ07343 736 aa24.7■■□□□ 1.54
HLA-C-201ENST00000376228 DCAF15Q66K64 600 aa24.7■■□□□ 1.54
HLA-C-201ENST00000376228 AMOTL1Q8IY63 956 aa24.7■■□□□ 1.54
HLA-C-201ENST00000376228 TEX11Q8IYF3 940 aa24.7■■□□□ 1.54
HLA-C-201ENST00000376228 CNKSR2Q8WXI2 1034 aa24.7■■□□□ 1.54
HLA-C-201ENST00000376228 ZKSCAN4Q969J2 545 aaPredicted RBP24.7■■□□□ 1.54
HLA-C-201ENST00000376228 HOOK2Q96ED9 719 aa24.7■■□□□ 1.54
HLA-C-201ENST00000376228 TOMM22Q9NS69 142 aa24.7■■□□□ 1.54
HLA-C-201ENST00000376228 ERICH2A1L162 156 aa24.69■■□□□ 1.54
HLA-C-201ENST00000376228 JAK2O60674 1132 aa24.69■■□□□ 1.54
HLA-C-201ENST00000376228 SLURP2P0DP57 97 aa24.69■■□□□ 1.54
HLA-C-201ENST00000376228 SEC23AQ15436 765 aa24.69■■□□□ 1.54
HLA-C-201ENST00000376228 SKOR2Q2VWA4 1001 aaPredicted RBP24.69■■□□□ 1.54
HLA-C-201ENST00000376228 RRP12Q5JTH9 1297 aaKnown RBP24.69■■□□□ 1.54
HLA-C-201ENST00000376228 TGFBRAP1Q8WUH2 860 aa24.69■■□□□ 1.54
HLA-C-201ENST00000376228 CSADQ9Y600 493 aa24.69■■□□□ 1.54
HLA-C-201ENST00000376228 CASP8AP2Q9UKL3 1982 aa24.68■■□□□ 1.54
HLA-C-201ENST00000376228 PTPDC1A2A3K4 754 aa24.68■■□□□ 1.54
HLA-C-201ENST00000376228 UNCXA6NJT0 531 aa24.68■■□□□ 1.54
HLA-C-201ENST00000376228 TRPA1O75762 1119 aa24.68■■□□□ 1.54
HLA-C-201ENST00000376228 WTAPQ15007 396 aa24.68■■□□□ 1.54
HLA-C-201ENST00000376228 OPTNQ96CV9 577 aa24.68■■□□□ 1.54
HLA-C-201ENST00000376228 ZNF341Q9BYN7 854 aa24.68■■□□□ 1.54
HLA-C-201ENST00000376228 RNF186Q9NXI6 227 aa24.68■■□□□ 1.54
HLA-C-201ENST00000376228 UBAC1Q9BSL1 405 aa24.67■■□□□ 1.54
HLA-C-201ENST00000376228 NCOA5Q9HCD5 579 aaKnown RBP24.67■■□□□ 1.54
HLA-C-201ENST00000376228 NAP1L2Q9ULW6 460 aaPredicted RBP24.67■■□□□ 1.54
HLA-C-201ENST00000376228 ATRNL1Q5VV63 1379 aa24.67■■□□□ 1.54
HLA-C-201ENST00000376228 CCDC69A6NI79 296 aa24.66■■□□□ 1.54
HLA-C-201ENST00000376228 SMIM22K7EJ46 135 aa24.66■■□□□ 1.54
HLA-C-201ENST00000376228 ZBTB43O43298 467 aa24.66■■□□□ 1.54
HLA-C-201ENST00000376228 CA12O43570 354 aa24.66■■□□□ 1.54
HLA-C-201ENST00000376228 ZBTB48P10074 688 aaPredicted RBP24.66■■□□□ 1.54
HLA-C-201ENST00000376228 INPP5BP32019 993 aa24.66■■□□□ 1.54
HLA-C-201ENST00000376228 IQCA1Q86XH1 822 aa24.66■■□□□ 1.54
HLA-C-201ENST00000376228 FAM184AQ8NB25 1140 aa24.66■■□□□ 1.54
HLA-C-201ENST00000376228 SNCAIPQ9Y6H5 919 aa24.66■■□□□ 1.54
HLA-C-201ENST00000376228 CYP2D6P10635 497 aa24.66■■□□□ 1.54
HLA-C-201ENST00000376228 METAP2P50579 478 aaKnown RBP eCLIP24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms